Sphingomicrobium maritimum: WJT74_09320
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Entry
WJT74_09320 CDS
T11086
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
smat Sphingomicrobium maritimum
Pathway
smat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WJT74_09320 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smat03400
]
WJT74_09320 (uvrB)
DNA repair and recombination proteins [BR:
smat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WJT74_09320 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WJT74_09320 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
AAA_22
UB2H
AAA_16
DUF87
PolyA_pol_RNAbd
Kinesin
eIF3_p135
Microtub_bd
SRP54
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XAM21107
LinkDB
All DBs
Position
complement(1828907..1831102)
Genome browser
AA seq
731 aa
AA seq
DB search
MAIQIRTSLAEPDTGEDFTPHRPARPEKAEGGRKFELVSDYEPAGDQPTAIKELVEGIRD
HGEDSQVLLGVTGSGKTFTMAKVIDTLQRPSLVLAPNKILAAQLYGEFKSFFPNNAVEYF
VSYYDYYQPEAYVPRTDTYIEKESSVNEAIDRMRHSATRSLLERDDVIIVASVSCLYGIG
SVETYSAMTFKLAKGDTVDQREIIRKLVALQYKRNDANFARGSFRVRGDNLEIFPSHYED
MAWRVSFFGDDIEEILEFDPLTGKPGAKLDRVKIYANSHYVTPGPTLEQARHAIKHELDE
RLKELVAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMARGDHRRKITLAEHGFRLPSCIDNRPLRFNEWDAMRPET
MFVSATPGPWEMEETGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLVNEARLTAQRGYRT
LVTTLTKRMAEDLTEYMHEQGIKVRYMHSDVETLERIELIRDLRRGVYDVLVGINLLREG
LDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRVTGSMERALNETG
RRREKQIAYNEEHGITPQSTKRAVEDLLKDVRDVTASGAGKMEKDAPPLAGSNLRAHIEG
LEEKMRKAAADLEFETAARIRDEIRKLEEDELGIPEAERSAPRVGYSNAGRPGTRKDRFG
KTRYKKMGGRP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagattcgcaccagtcttgccgaacccgacacgggcgaggactttaccccg
caccgtcccgcgcgccccgagaaggccgagggcggcaggaagttcgaactggtcagcgac
tacgagccggcgggcgatcagccgaccgcgatcaaggaactggtcgaagggatccgcgat
cacggcgaggacagccaggtgctgctgggcgtcacggggtcgggcaagaccttcacgatg
gccaaggtcatcgacacgttgcagcggcccagtctggtgctggcgcccaacaagatcctc
gcggcgcagctctatggcgagttcaagagcttctttcccaataatgcggtcgaatatttc
gtcagctattacgattattaccagcccgaggcctatgtgccgcggaccgacacctacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccattctgcgacgcggtct
ttgctggagcgggacgacgtgatcatcgtcgcgtcggtcagctgtctatacggcatcggg
tcggtcgagacctattcggcgatgaccttcaagctcgccaagggcgacacggtcgaccag
cgcgagatcatccgcaagctggtcgcgctgcaatacaagcgcaacgacgccaatttcgcg
cgcggcagctttcgggtgcggggggacaatctggaaatcttcccgtcgcactacgaggac
atggcgtggcgggtgagcttcttcggggacgatatcgaggagattctggaattcgatccg
ctgaccggcaagccaggcgcgaagctcgaccgggtgaagatctacgccaactcgcactac
gtgacgccggggccgacgctcgagcaggcgcggcacgcgatcaagcacgaactggacgag
cgattgaaggagctggtggcggaggggaagctcttggaggcgcagcggctagagcaacgg
acgaatttcgacctggagatgatcgcggcgacgggcagctgcgcggggatcgagaattat
tcgcggttcctgaccgggcgcctgccgggcgaaccgccgcccaccctgttcgaatatctg
cccgacaatgcgctcctgttcgtcgacgaaagccaccagacggtgccgcagatcggcgcg
atggcgcgaggcgatcaccgccgcaagatcacgctggccgaacatgggttccgcctgccg
agctgtatcgacaaccggccgctacggttcaacgaatgggatgcgatgcggcccgagacg
atgttcgtgtcggcgacgccggggccgtgggagatggaggagacgggcggcgtcttttcc
gaacaggtcatccgcccgacgggcctcatcgacccgccggtcgagatcaagccggtcgag
gaccaggtcgacgatctggtcaacgaggcgcggctgacggcgcagcgcgggtatcgcacg
ctggtgacgacgctgaccaagcggatggccgaggacctgaccgaatatatgcacgagcag
ggcatcaaggtcagatacatgcattccgacgtcgagacgctggagcgcatcgagctgatc
cgcgaccttcggcgcggggtctatgacgtgctcgtcggcatcaacctgctgcgcgaggga
ctggatattcccgagtgcgggctggtcgcgatcctcgatgcggacaaggaaggcttcctg
cggtccgagacgagcctcatccagacgatcgggcgcgcggcgcgcaacgtcgacgggcgg
gtcattctctatgccgaccgggtgacgggttcgatggagcgggcgctcaacgaaaccggg
cggcggcgcgagaagcagatcgcctacaacgaggaacatggcatcacgccgcaatcgacc
aagcgcgcggtggaggatctgctcaaggacgtccgcgacgttaccgcgtcgggcgcgggc
aagatggagaaggacgcaccgccgttggcggggtcgaaccttcgcgcgcacatcgagggg
ctcgaggagaagatgcgcaaggccgcagcggacctggagttcgagacggccgcgcggatc
cgagacgagatccgcaagctggaagaagacgagctgggcattcccgaggccgagcggtcg
gcgccgcgcgtcggctattccaatgcgggtcggccgggaacgcgcaaggaccgcttcggc
aagacgcgctacaagaaaatgggcgggcggccctag
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