Sphingomicrobium maritimum: WJT74_10430
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Entry
WJT74_10430 CDS
T11086
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
smat Sphingomicrobium maritimum
Pathway
smat02020
Two-component system
smat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
smat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJT74_10430 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WJT74_10430 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smat03021
]
WJT74_10430 (rpoN)
Transcription machinery [BR:
smat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJT74_10430 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_21
HTH_12
Motif
Other DBs
NCBI-ProteinID:
XAM21319
LinkDB
All DBs
Position
2063937..2065376
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AA seq
479 aa
AA seq
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MALGPSLDIRVSQQLVMTQQLQQAIKLLALSAIEVEAVVEEELAKNPLLERGGDDGGAEE
APDRAPDSQDEVEGSGADERIGDDGALDYDAGEAARETDCLPDLPMASAGEAFDFERLED
RPASLKEHLLAQLAGTPGALGAAAEAIVHSLAETGYLERALEDMSDSLGAPIEEMEAALV
LVQGLDPAGVGARSLAECLRLQAIAADRHDPAMARLIDNLDLLAKGRMKDLRRICQVDED
DLADMVAELRAYDPKPGCRFTGTPATDILPDVLVEKGAEGWQVTLNPDALPRVLVNRAYH
AELKAGANDKAARTWLADQLHEASFLVKALDQRAQTILKTAIEIVRVQEGFFRHGVSALK
PLTLAAVAEKIDVHESTVSRVTSNKYLFCERGLFELKYFFGSGVGSADSDEGASALAVKS
AIKKLIDEEEKILSDDALVKELRAQGYDLARRTVAKYREAMGLGSSVQRRRQRKMERGR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccctcggacccagcctcgatatccgcgtctcgcagcagctggtgatgacccagcaa
ttgcagcaggcgatcaagctgctggcgctgtccgccatcgaggtcgaggcggtggtcgag
gaggaactggcgaaaaacccgctgctcgagcggggcggcgacgatggcggtgcggaggag
gcacccgacagggcaccggatagccaggacgaggtggaagggtcgggcgcggacgagcgc
atcggcgatgacggggcgttggattacgatgcgggcgaggccgcgcgcgagaccgattgt
cttcccgacctgccgatggcgtcggcgggcgaggcgttcgatttcgaacggctcgaggat
cggcccgccagcctgaaggagcatctgctggcccaactggccgggacgccgggagcgctc
ggggcggcggccgaggcgatcgtccacagcctcgccgaaaccggctatctggaacgagcg
ctggaagacatgtccgacagcctcggcgcgccgatcgaggaaatggaagcggcgctggtg
ctggtccaggggctcgaccccgcgggtgtgggcgcccgatcgctggccgagtgcctgcgc
ctccaggcgatcgccgccgaccggcacgatcccgcgatggcgcggctgatcgacaatctg
gatctgctcgccaagggccggatgaaggatctgcggcgcatctgccaggtcgacgaggac
gaccttgccgatatggtcgccgagcttcgtgcctacgatcccaagcccgggtgccgtttc
acggggacgcccgcgaccgacatcctgcccgacgtactggtcgagaagggcgcggagggg
tggcaggtgacgctgaaccccgatgcgttgccgcgggtgctggtcaatcgcgcctatcat
gccgagctaaaggcgggggcgaacgacaaggcggcgcggacgtggctggccgaccagctg
cacgaggcgagttttctggtaaaagctctggaccagcgcgcgcagaccatcctcaagacc
gcgatcgagatcgtccgggtgcaggaaggcttcttccgccacggcgtgtcggccctgaaa
ccgctgaccctcgctgccgtggccgagaagatcgacgtccacgaaagcaccgtcagccgc
gtgaccagcaacaagtacctgttctgcgaacgcgggctgttcgaactcaaatatttcttc
ggctcgggcgtcgggtcggcggacagtgacgagggggcgagcgcgctggcggtcaagtcg
gcgatcaagaagctcatcgacgaggaggagaagatcctgtcggacgatgcgctggtgaag
gagctgcgcgcgcaaggctacgacctggcgcgtcgcaccgtcgccaaatatcgggaagcg
atgggactcgggtcgagcgtccagcgacggcgccagcgcaagatggaacggggccgctag
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