KEGG   Scophthalmus maximus (turbot): 118282496
Entry
118282496         CDS       T09850                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04145  Phagosome
smau04148  Efferocytosis
smau04510  Focal adhesion
smau04512  ECM-receptor interaction
smau04810  Regulation of actin cytoskeleton
smau04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118282496 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118282496 (itgb5)
   04148 Efferocytosis
    118282496 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118282496 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118282496 (itgb5)
   04810 Regulation of actin cytoskeleton
    118282496 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118282496 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:smau04515]
    118282496 (itgb5)
Membrane trafficking [BR:smau04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118282496 (itgb5)
Cell adhesion molecules [BR:smau04515]
 Integrins
  Integrin beta subunits
   118282496 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 118282496
NCBI-ProteinID: XP_035459490
LinkDB
Position
14:1591055..1618256
AA seq 803 aa
MCGAGTWMWRAALCCVLLGNLLPPARGLNMCMSGSATSCEECLLIHPSCAWCAQEDFGRG
RTLTSRCDFSQNLQKRGCEAPFIEYLASSTSVLENRPLSSKGSGSTQYDVVQIMPQKISL
SLRPGDQTWFGVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQENPCSGYKLFPKCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGQCHLNDLNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIIAAYNNIRSKVELTVWDHPEDISLSFTATCQDGKPLPGLRKCADL
KIGDTVSFNVSVEARSCPARGADQSFTIKPVGFKDRLQLAVDYQCDCGCSRTAQTNSSIC
SSIGTYNCGTCRCEPGYLGARCECQEGEASSTYLSGCREAEGKQVCSGRGECSCNQCLCY
ESEFGKIYGGFCECDDFSCARHKGVLCSGHGECHCGECKCHAGYVGDNCNCSTETASCVA
DDGQMCSGRGHCACGRCQCTEPGAFGVTCEKCPTCPDACGTKRECIECRLFNSGRLADNQ
TCQRLCKDEIITVESFNADDPGAVLCLYKTDDDCVMKFTYSEHASGQSILTALQEPECGG
GPDAMTVLLAVVGSILLVGMVLLAVWKLVITVHDRREFARFQSARSRARYEMASNPLYKQ
PVSTHFVETDFNMYGKSYNGGVH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtgcggcgcggggacgtggatgtggcgagcggcgctgtgctgcgtgctgctggggaac
ctgctgcccccggcccgaggtctgaacatgtgtatgagtggcagcgcgacgtcctgtgaa
gaatgtctcctgattcaccccagttgcgcctggtgcgcacaagaggactttgggaggggg
cggactctgacgtcgcgctgcgacttcagtcagaacctgcagaagaggggctgcgaggct
ccgttcatcgagtacctggccagcagcacctcggttctggagaaccggcccctgagctct
aaaggctccgggtcgacccagtacgacgtggtccagattatgcctcagaagatctccctc
agtttgagaccaggagaccagacgtggttcggcgtgcaggtgcggcaggtggaggactac
ccggtggacctctactacctgatggacctctcgctctccatgaaggacgacctggacacc
atccgcaacctgggcaccaagctggcactggagatggggaagctcaccagcaacttccgg
ctgggcttcggctccttcgtggacaagaacatgtcgcccttctcctacacggcgcccaag
taccaggagaacccctgcagcggatacaaactcttccccaaatgcgtccccaccttcggg
ttccgccacatcctgtcgctgacggacaaagtggaccgcttcaacgaggaggtgcagaag
cagatggtgtcgcgcaaccgggacgcgccggagggcggattcgacgccatcctgcaggcg
gctgtttgtaaggagaagatcggctggaggaaggaggcctaccacctgctggtgttcgcc
acggacgacgtgcctcacctggctctggacgggcggctgggaggtctcgtgcagccgcat
gacggacaatgtcacctcaacgacctgaacgagtacagcgcctccaccaagatggattat
ccttctctggctcttctgggagagaaactggctgaaaacaacatctttctcatcttcgct
gtcacaaagcggctgtacgttatttataagaatttcactgcactcatccctggaacgacg
gtggagatcctggatcaggactcaaagaacgtcatccagctgatcatcgcagcgtacaac
aacatccgctccaaagtggagctgacggtgtgggaccacccggaggacatcagcctgtcg
ttcaccgccacctgccaggacgggaagccgctgccgggcctcaggaagtgtgccgacctg
aagataggagacacggtttccttcaacgtgagcgtggaggcgaggagctgccctgcccgc
ggcgccgaccagagcttcaccatcaagccggtgggcttcaaagaccgcctgcagttggcg
gtggactatcagtgcgactgcggctgcagtcggacggcgcagaccaacagcagcatctgc
agctccatcggtacgtataactgcgggacgtgtcgctgcgagccgggctacctgggcgcc
cgctgcgaatgccaggagggcgaggccagcagcacgtaccttagcggctgccgcgaggcc
gagggcaagcaggtgtgcagcggccgcggggagtgcagctgcaaccagtgtctgtgctac
gagtcggagttcggcaagatctacggcggcttctgcgagtgcgacgacttctcctgcgcc
cgacacaaaggcgtcctctgctctggtcacggcgagtgtcactgcggcgagtgcaagtgt
cacgccggctacgtcggcgacaactgcaactgctcgacggagacggcgtcctgcgtcgcc
gacgacgggcagatgtgcagcggccggggccactgcgcctgcggccgctgccagtgcacc
gagccgggcgccttcggggtcacgtgcgagaagtgtcccacctgccccgacgcctgcggc
accaagagggagtgtatcgagtgtcggctcttcaactcgggacgactcgcagacaaccag
acctgccagcgcctctgcaaggatgaaatcattactgtggagtccttcaacgccgacgac
cccggcgccgtgctgtgtctgtataaaaccgacgacgactgcgtcatgaagttcacgtac
tccgaacacgccagcggacaatccatcctcaccgcgctccaagagccagagtgcggcggc
ggaccggacgccatgacggtgctgctggccgtggtcggcagcatcctgctggtgggaatg
gtgctgctcgccgtgtggaagttggtcatcaccgttcacgaccggcgggagtttgcgcgc
ttccagagcgcacgctcacgcgcccgctacgagatggcctccaaccctctgtacaagcag
ccggtgtccacgcacttcgtggagacggatttcaacatgtacgggaagtcgtacaacgga
ggggtccactga

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