Scophthalmus maximus (turbot): 118282544
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Entry
118282544 CDS
T09850
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
118282544 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118282544 (xrcc5)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
118282544 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
118282544
NCBI-ProteinID:
XP_035459610
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Position
14:complement(12304323..12312439)
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AA seq
730 aa
AA seq
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MKSGKRFLSALVLCMDVGFSMSNSGPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLF
GTEDTKNPLALDRQYQHITIHRHLMVADFELLEEIENQIHPESQQADWLDALVVCMDLLQ
KETKGKKYDRLNIALLTDLNAQSSSDHLDVIIENLKRAGITLQFFLPFPVKDDEEGGGNG
GRRSPGHPGTGKGLSMEQKDSVDMMKHIMLTLDEEDGLDQIHTFRNAIEQLRMFKGIERR
PMAWPCQLTIGSSLSIRIVGFKAVTEEKLKKIWATVDAQTAQKEDVKRETVYCLDDDNET
EVQKDDTIQGFLYGSDIVPFSKVDQDQMKYTHDGKCFAVLGFAKENTVRRHQFMGNQVIK
IFAARGDEHAGVALSAVIRALDECKMVAIVRYAYDRRSNPQIGAAFPCIKRDYECLMYVQ
LPFTEDLRQFTFPSLENNKKFTPSETQLSAVDSLIDSMMLVEEDENGEKRDMLKVHHIPN
PAFQRHFQCLHHRAVCPGTPLPPMESWLKAALERPEVISERCQAPLEEMKKKFPLTQVEK
KKKLKTSAQIFGKDSEVPDAKKAKGDDEEEEEEYNLADIAEGSVTSVGSVNPDRDFCTLI
KRKSLPFGEVCQQLTHRIEQLLGNKNTHYYMKSITCIQAFREQSVKQGNAELYNSYLQSL
KRSIPNRGLEVFWDLLVQDAITLISKDEVDGSFVSKNEANQFLVAEEKKEETTAPPAEDT
GDFDDLLDMM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctggaaaacgcttcctgtcagcgctggtgctgtgtatggacgtgggcttctcc
atgtccaactctggcccgggtgaggagcctcccttcgaactggccaaaaaagtcatccag
aagtttgtccagcgtcaggtttttgcggagacaaaggatgagctggctttagtcctgttc
ggcacagaagacaccaagaaccctctggccctggacaggcagtaccagcacatcaccatc
caccgccacctcatggtggctgactttgagctcctggaggaaattgagaatcagatccac
ccagagagtcagcaggcagattggctggatgctcttgttgtctgcatggatctccttcag
aaagaaactaaggggaagaagtacgatcgtctcaacattgccctcctgacagacctcaac
gcccagtctagttcagaccacctggatgttataattgaaaacctgaaacgagctggcatc
acattacagttctttttgcctttccctgtgaaggacgacgaggagggcggggggaatggg
gggagacgaagccccggtcacccaggcactggcaaaggtctgtccatggaacagaaagac
agtgtggacatgatgaaacacatcatgctgactctggatgaggaggacggcctggatcaa
atccatacattcaggaatgcaattgagcagctgcgcatgttcaagggaatcgagaggaga
cccatggcctggccctgtcagctgacaattggcagctctctgtctatccgtattgttggg
ttcaaagcagtgacagaagagaagctaaagaaaatatgggccacagtcgacgctcaaacc
gcccagaaagaagacgtgaagagagagactgtctactgcctggacgatgacaacgagact
gaggtgcaaaaggacgacactattcaaggttttctttatggaagtgacattgttcccttc
tccaaagtggatcaagaccagatgaagtacacgcacgacggcaaatgctttgctgttctt
ggctttgcaaaagagaacacggtacgccgtcatcaattcatgggaaatcaggtcatcaag
atttttgctgccaggggtgatgagcatgcaggagtggcgctgtcggccgtcatccgggcg
ctggatgaatgcaaaatggtggccattgtgcgttacgcctacgaccggcgcagcaaccct
caaataggagccgctttcccttgtatcaagcgggactacgagtgtctgatgtacgtccag
ctgcccttcacagaagacctcagacagtttacgtttccttctcttgagaacaacaagaag
ttcacaccgtcagaaactcagctttctgctgtggactctctcattgactctatgatgttg
gtcgaggaagacgagaatggagaaaaacgtgacatgttgaaggtccatcacattcccaac
cctgccttccagaggcacttccagtgtctgcatcatcgggcagtatgtcccggtaccccc
cttccccccatggagtcgtggctgaaggctgctctcgagcgccctgaggtcattagcgaa
cgttgccaagctcctctcgaggagatgaagaagaagtttccactcacgcaagtggagaag
aaaaagaagctgaagactagtgctcagatttttggcaaagactcggaggtgccggatgcc
aaaaaggcaaaaggagatgacgaagaagaagaggaggagtataatctggccgacattgct
gaaggctctgttacttcggtgggaagtgttaatccagaccgagacttctgcactctgatc
aagaggaagagtcttccattcggagaagtctgtcagcagctgactcacaggatagagcag
ttgcttggcaacaagaacacacactactacatgaaaagcatcacttgtatccaggctttt
agagagcagtccgtcaagcagggaaatgctgagctgtacaatagctacctccagtctttg
aagaggagcattccgaacagaggactcgaggtcttctgggacctgctcgttcaagatgcc
ataactctgatcagcaaggacgaggttgatggaagcttcgtgtccaaaaacgaggctaat
cagtttctggttgctgaggagaagaaagaggagacgactgcacccccagctgaagataca
ggagatttcgatgacttgctggacatgatgtaa
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