Scophthalmus maximus (turbot): 118282559
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Entry
118282559 CDS
T09850
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118282559 (ddx18)
03009 Ribosome biogenesis [BR:
smau03009
]
118282559 (ddx18)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118282559 (ddx18)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118282559 (ddx18)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
90S particles
Helicases
118282559 (ddx18)
Pre-60S particles
118282559 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
BUD22
Motif
Other DBs
NCBI-GeneID:
118282559
NCBI-ProteinID:
XP_035459641
LinkDB
All DBs
Position
14:complement(21608010..21615488)
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AA seq
676 aa
AA seq
DB search
MADLQMKLLRKKIQKRSDKNKERKLLNKPTEDEETVNGLEEEPATSCKTASVPKKKQKKQ
NGAPVEETLTEKPTPQKNKKKKRKLTDTAGSPAEKKNKPVEEEEEKEEEEEEEEDVEEAG
LADGDGEEAADDLEVATDEDDDDEEEDEEEDEEEEDGSIKGDNEEEDQPELPSGLTGAFE
DTSFASLAELVSDSTLKGVKEMGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLI
PSIELIYKLKFMPRNGTGVVILSPTRELAMQTYGVMKELMTHHVHTYGLIMGGSNRSAEA
QRLANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLP
KKRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLL
LFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNAD
SGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGIGHALLILRPEEL
GFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSL
KQIYSVNTLNLPMVALSFGFKVPPYVDLNVHSSRGVKLQKRGGGGGFGYQKSKNVHKSKI
FKHVNKGKGDRRQFSR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgcagatgaagcttctccgcaaaaagattcagaagagaagcgataagaac
aaggagcggaagctactcaacaagcccacagaagacgaggagacggtaaacggactggaa
gaggagccagctacttcctgtaagacagccagcgtgcccaagaagaaacagaagaagcag
aacggggcgccagtagaagagaccctaacagagaaaccaactcctcagaagaataaaaag
aagaaacggaagctcaccgacactgcaggatcaccagctgaaaagaagaacaaaccagtg
gaagaagaagaagaaaaagaggaggaggaggaggaagaagaagatgtggaggaagccgga
ctagcagatggcgatggagaagaggctgctgatgacctagaggtagctacagatgaagat
gacgatgatgaggaggaggatgaggaggaggacgaggaggaggaagatggatctataaaa
ggagataacgaagaggaagatcaacctgaattaccatctggcctaacaggagcatttgag
gacacatcatttgcctctctcgccgagttggtgagtgacagcactctgaaaggcgtgaag
gagatgggctttgaacacatgactgagatccagcacaagagtattcgtcccctgctggag
ggaagggatgtgctcgctgcagccaagacgggcagtggtaaaaccttggccttcctcatc
ccgtctatagagctcatctacaaactcaagttcatgccaaggaatggcaccggtgtggtg
atcctctcgcccacacgtgagttggcgatgcagacctacggtgtgatgaaggagctgatg
acgcaccacgtgcacacctacggtctgatcatgggcggtagcaaccgctcggccgaggcc
caaagactggccaatggtgtcaacattctggtggccacacctggtcgtctgctggaccac
ctgcagaatacccccgggttcatgttcaagaacctgcagtgtctgattatcgacgaggcc
gaccgcatcttggaggtgggcttcgaggaggaactgaagcagatcatcaaacttctgccg
aagaagagacagaccatgctgttctcagccactcagacacgtaaggtggaggacttggct
cgcatctccctgaagaaagagcccctgtacgtcggggtggatgacaacaaagacaatgcg
acagtcgatggcctggagcagggttatgtggtgtgtccatcggagaagagattcctgctg
ctcttcaccttcctgaagaagaaccgcaagaagaagctgatggtcttcttctcctcttgt
atgtctgtgaaattccactatgagctcctcaactacattgacctgcctgtaatggccatc
catggcaagcagaagcagaccaaacggaccaccaccttcttccagttctgcaacgccgat
tcaggcatcctgctgtgtacggacgtggcagctcgaggactggacatccccgaggtggac
tggatcgtccagtacgaccccccagacgaccccaaggagtacatccacagggtgggcagg
acagcccgaggcatcaacggaataggccacgccctcctcatcctcagaccagaggagctt
ggcttcctgcgcttcctcaaacaggccaaggtccccttgagcgagtttgaattttcctgg
accaaaatctctgacatccagtctcagctggacaaactgattgagaagaactactacctc
cacaagtcggcgcaggaggcctacaagtcctacgtgagggcgtacgactcccactcgctc
aaacagatctacagcgtcaacaccctcaacctgccaatggtggcgctctcgtttggcttc
aaagttcctccatacgtcgatctgaacgtccacagcagtagaggcgtaaagctccagaag
cgaggcggcggaggtgggtttggataccagaagtccaagaatgtgcataaatccaagatc
ttcaagcacgtcaacaaaggaaagggcgacaggaggcagttctcccgttga
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