Scophthalmus maximus (turbot): 118282701 Help Entry 118282701         CDS       T09850                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism smau  Scophthalmus maximus (turbot) Pathway smau04382   Cornified envelope formation smau04510   Focal adhesion smau04512   ECM-receptor interaction smau04518   Integrin signaling smau04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:smau00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118282701 (col4a1)    04518 Integrin signaling     118282701 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     118282701 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     118282701 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     118282701 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:smau04147]     118282701 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:smau00536]     118282701 (col4a1) Exosome [BR:smau04147]  Exosomal proteins   Exosomal proteins of other cancer cells    118282701 (col4a1) Glycosaminoglycan binding proteins [BR:smau00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118282701 (col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  118282701 NCBI-ProteinID:  XP_035459907 LinkDB All DBs Position 14:8068638..8101786 Genome browser AA seq 1640 aa AA seqDB search MLPPPPGALLLLAAVCSSFDRTGAEGCGTSCGKCDCSGVKGEKGERGFPGLQGNMGFPGM QGPEGPPGAMGPKGDLGGPGSPGLKGVRGPPGLPGFPGNPGLPGINGNDGPPGQSGIPGC NGTKGERGRDGTPGFGGLQGPPGIPGIPGIKGDAGGLIGIVPLKGDRGFPGTPGLPGSIG TSGPTGPPGPRGYQGPKGDPGPAGPQGEKGDRLAFVSEKGEKGEPGFRGPPGPPGPPQGV EGQTTVHVPGPPGDRGLHGDKGEKGHCIAHLSGIKGEAGPPGPRGKPGKDGDNGTKGEMG FPGGPGYIGSQGEKGERGPPGYGSGSPGPPGPRGLPGLQGEKGFLGPQGEAGPPGRHIEG PRGEQGQKGDVGEKGDRGIEGESLVGPPGQPGVAGPPGTPGLPIVSSQCDIEKGAPGPAG PPGLQGEVGQKGDIGDTCVQCESFGPPGLPGPQGFKGDRGPPGAVGGKGEKGQSGPAGQS GRTGTDGSPGLMGAPGAVGEPGDIFIAPGLKGDRGFSGLDGSPGKPGLNGQQGRDGLPGV PGLKGEPAKEGIKGERGPDGDPGHFGTPGERGPPGLPGIGRPGESGEKGSPGRSGIPGSP GVPGVKGEPGAGVSAPGPQGVPGPQGETGRPGLPGDRGQQGDSGMPGFPGPKGDQGSSGI GFPGPTGQKGISGIPGAPGLPGEPGKPGQDGFSGQPGPPGTKGEPGRGLPGPKGLQGLPG IAGFQGEKGNIGHPGVPGQEGQTGPPGAQGLRGDVGPPGPPGLVGLPGEPGKGSPGAPGP QGPTGEPGPYGREGVKGEKGYPGPPGLDMPGPQGEKGIPGFPGSTGSKGLPGPSGLPGRD GLIGNQGPKGEMGVMGTPGIPGFPGSPGTPGSSGLRGDPGITGPRGNIGEPGPKGERGER GLQGPAGNMSKVDMEHMKGEKGDLGDFGDPGITGQKGHRGMPGDPGMPGKDGEPGSPGQP GEKGDPGFPGDPGSMGPPGHKGGVGEMGIPGALGPKGSKGDFGTPGHPGFRGTDGQKGDK GAAGDPGLGIPGHPGEKGQTGQPGFPGSPGEKGLKGQEGMSGKPGLQGPKGEQGGSGYPG QPGRPGDKGTPGLPGSAGESGREGRPGQGGLQGPSGPPGEKGEAGVDGIPGSSGERGDPG LPGRGFAGPPGILGGKGDKGSPGFPGTPGHPGVPGIKGDKGLTGSQGQQGEPGERGGPGI SLEGPKGERGGTGQPGESGTTGAPGPAGVPGRHGQKGERGDQGLPGFQGESGQKGDPGFP GLPGQAGLPGIDGQKGEIGLHGVPGFPGVKGNFGDIGFKGEFGDRGFPGEKGNDGPPGPP GPHTFIKGDIGFPGTQGLPGPQGPSGFLGLKGQQGVTGIAGPKGDDGLPGYHGQPGAKGE PGLPGPQGPRGYPGPPGPDGVPGQVGPPGPSSMDHGFLVTRHSQTIEVPYCPEGTMLIYD GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM PMSMAPITGESIKPFISRCAVCEAPAMVIAVHSQNIMIPPCPQGWDSLWIGYSFVMHTSA GSEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDNEMFTKPVPTT LKAGNLRTHISRCQVCMKRT NT seq 4923 nt NT seq  +upstreamnt  +downstreamnt atgctgccgccgccgcccggcgccctgctgctgctggcggctgtctgctcgagcttcgac cggaccggagctgagggttgtggaacatcgtgtggaaaatgtgactgcagtggtgtgaaa ggagaaaagggtgaacggggatttcctggtcttcaaggtaatatgggatttccagggatg cagggacctgaggggcctccaggggcaatgggcccaaagggagatctgggggggcctggc tctcctggactgaaaggagtgaggggtccgcctggtctgccaggtttcccaggaaaccca ggactgccaggcatcaatggaaatgatggcccaccaggtcaatcaggtatcccaggatgc aatgggactaaaggagaaaggggaagggacggcactcctggttttggtggacttcaagga cctccgggcatcccaggaattcctggaattaagggtgacgctggtggtctgattgggatc gttcccctgaaaggagacagaggattccccggcacaccgggattacctggatcaattgga acttctggacccaccggaccaccaggacctcgtggctaccaaggacccaaaggtgaccct ggtccagctggccctcaaggagagaagggtgacaggctggcttttgtgagtgagaaagga gaaaagggtgagccaggatttcgtggcccaccgggcccccccggacctccccagggagtg gaaggacaaaccacagtgcatgtacctggaccaccgggagacagaggacttcacggagac aaaggagagaaaggccattgcatcgctcatctcagtggtatcaaaggtgaagccggtcca cctggaccaagaggtaaacctggcaaggatggagataatgggacaaagggagagatgggc tttccaggaggccccggatacattggttcccagggtgaaaaaggagaacgaggaccacca ggttatggtagcggttcccctggcccgcctggtcctcgtggtctcccagggttacaagga gaaaaaggttttcttgggcctcagggagaggcaggtccaccaggccgacacatcgaaggg cctcgaggggagcagggtcagaagggagacgtgggtgagaaaggagacaggggaatagaa ggagagtctctggtcgggcctccaggacaaccaggagttgctggacctcctggaacacca ggcctcccaattgtctctagtcaatgtgacatagagaaaggcgctcccggcccagctgga cctccagggttacaaggggaagtcggacagaaaggtgacataggcgatacctgtgttcag tgtgaatctttcggcccacctggattacctggcccccaggggtttaagggagatcgcgga cctcctggggcagtaggaggcaaaggagagaagggtcagtcaggccccgctggacaatct ggaagaaccggtaccgacggcagccctgggctgatgggagctcctggtgctgttggtgag cccggggacattttcatagctcccggtctgaagggagacagaggtttttctggtcttgat ggttcaccgggaaagccaggacttaatgggcagcaagggagagatggcctcccaggtgta cctggcctcaaaggagagcctgccaaggagggcattaagggtgagcgtggaccagatggg gaccctggtcattttggaaccccaggagagaggggtccccctggtcttccaggcatcggt cgaccaggagagtctggagagaaaggaagtccagggagatcaggaattcctggatctccc ggagtaccaggtgtaaaaggtgagccaggtgcaggtgtgagcgctccaggacctcaggga gtacctggaccacagggagaaaccggccgacctggacttccaggggacagaggccagcag ggagactctgggatgccaggtttccctggaccgaaaggtgaccaaggatcctctggaatt ggtttccctggcccaacaggtcaaaaaggaatcagtggaattcctggagctccaggatta ccaggagagccgggaaaaccaggacaggatggctttagtggacaacctggtccacctgga acgaagggtgaaccaggacggggacttccaggcccaaaaggtctgcagggcctcccagga attgctggcttccagggagagaagggtaacattggacaccccggtgttcctggacaggaa gggcagacaggaccaccaggagctcagggattaagaggtgacgtgggacccccagggcct cctggactggttggcttaccaggtgaaccaggaaaaggctcacctggagctcctggccca cagggaccaactggagagcctggaccatacggtagagaaggtgtaaagggagaaaaaggc taccctggacctcccggtctggacatgccggggcctcagggagaaaagggaatccccggt ttcccaggatccacgggctctaaaggactgccagggccatcggggttaccgggcagggac gggctgattggaaaccaaggtcctaaaggtgaaatgggggtcatgggaacaccgggaata ccaggatttcccggatcacctggtacacctggatcttctggtctgagaggtgatcccggt attactggaccaagaggcaacattggagagcctggacctaaaggagaaaggggagagcga ggtctgcagggacctgcagggaacatgagcaaagttgacatggagcacatgaagggggag aagggagaccttggagactttggtgaccctgggatcacgggacagaagggccaccgtgga atgcctggagaccccggcatgccaggcaaagatggggagcctggatcacccggacaacca ggtgagaaaggagaccccggttttcctggagaccctggcagtatgggaccacctggacat aagggcggtgtaggagagatggggataccaggtgcgctcggtcctaaaggtagtaaagga gattttggtacaccgggacatccaggattcagaggcacagatggacagaaaggagacaag ggagcagctggtgatccaggtctagggatcccaggacatccaggagaaaagggtcagaca ggccagccaggatttccaggatcaccaggagagaaaggtcttaagggtcaagagggtatg tctggcaaaccaggactgcaaggacccaaaggagaacaaggaggctccgggtatccaggt cagccaggtagaccaggtgacaagggtactcctgggcttcctgggtctgcaggagaatct ggtcgtgaaggtcgacccggtcagggcggcttgcagggaccctctggtcctccaggagag aagggagaggctggagtggatggcatccctggatcctcgggggagagaggagacccaggt ttacctggccgaggtttcgctgggccacctgggattcttggtggcaaaggcgacaaaggt agccctggcttccctggtactccaggtcatcctggtgtccctggtataaaaggcgacaag ggacttacaggctcacagggacaacagggtgagccaggagagagggggggcccaggtata tctctagaaggccccaaaggagagagaggagggacaggacaacctggagaatcaggaacc acgggagcaccaggacctgctggtgtgccaggcagacatggacaaaagggagagagagga gaccaaggactccctggtttccaaggagagtcggggcaaaagggcgaccctggatttcct ggacttcctggacaagccggccttccaggtatcgatggacagaagggagagattgggctg cacggtgtccctggatttccaggtgtaaagggtaattttggggacattggattcaaagga gagtttggagacagaggattccccggagaaaaaggtaatgacggccctccaggtccccct gggccacacaccttcattaaaggagacattggattcccaggaacacaaggtcttccagga ccacaggggccatctgggttccttgggctgaaaggacagcaaggtgtgacaggaattgcg gggccaaaaggtgacgacggcctccctggatatcacggtcagcctggagccaaaggagag cccggcctgccggggccacaaggacccagaggataccctggccccccaggacctgatggt gttccaggtcaagtgggtccccctggcccctcctccatggaccatggtttcttggtaacc cgtcacagccaaacgatagaggtgccatattgtcccgagggaaccatgctcatatatgac ggctactccttgctctacgtgcaaggcaatgaacggtctcatggacaggacttaggtacg gcaggcagctgtttaaggaagttcagccccatgcccttcctgttctgtaacatcaacaac gtgtgcaacttcgcctctcgtaatgactactcctattggctcacctctcctgagcccatg cccatgagcatggcgccaatcaccggtgagagcatcaaacccttcatcagcaggtgtgct gtgtgtgaggccccggccatggtgatagcagttcacagtcagaacatcatgatccctccg tgccctcaaggctgggactctctgtggattggctactcctttgtcatgcacaccagcgct ggctccgagggttcgggccaggctctggcctctcctggctcctgcctggaggagttccgc agcgctccgttcatcgagtgtcacggccgcggaacctgcaactactacgccaactcctac agcttctggcttgccaccatcgaagacaacgagatgtttacgaaacctgtcccaacgacg ctaaaagcaggcaatctcagaacacacataagccgctgtcaggtgtgcatgaagaggaca tag

DBGET integrated database retrieval system