Scophthalmus maximus (turbot): 118282754
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Entry
118282754 CDS
T09850
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X2
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00100
Steroid biosynthesis
smau01100
Metabolic pathways
Module
smau_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
118282754 (lss)
Enzymes [BR:
smau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
118282754 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
118282754
NCBI-ProteinID:
XP_035460012
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Position
14:19644230..19660788
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AA seq
735 aa
AA seq
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MSEGTHLRRRGGPYRTEPATDLSRWRLTNMEGRQTWRYVEEQETPDRAQTMLEAHSLGID
TNTFVSDSPTAHTAVDVALKGMHFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
PEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYISQRILGVEPDDPDMVKARNN
LHGKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPAWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAEEDSLVLSLRQELYLQDYATINWPAQRNNVAACDMYKPHSTLLTFAYKV
LNVYEAHHSSTLREMAVKELYDHIQADDRFTKCISIGPISKTINMLVRWYVDGPSSPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDTPRLAECLQDAHQFLT
ITQIPENPPEYQKYYRQMNKGGFPFSTLDCGWIVADCTAEGLKSVMLLQELCPSISQPVP
TERLYDAVNVLLSMKNSDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALWHFQKVHPEHRAEEIRSTLREGLEYCRRVQRPDGSWEGSWGVCFTYGIWFGLEAYACM
GHVYEDKDVCVEVQKACQFLLDRQMPDGGWGEDFESCEQRCYIQSSTAQIHNTCWALLGL
MAVRHPDRQVIERGVQLLIDKQLPNGDWPQENIAGVFNKSCAISYTSYRNVFPVWTLGRF
STLYPSSPLAGKVKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggaacgcacctgcggaggcgaggggggccgtacaggacggagcctgccaca
gacctgagccgctggaggctgactaatatggagggcaggcagacctggcgttatgttgag
gaacaggaaaccccagacagagcgcagaccatgctggaagcccactcgctaggcatagac
acgaatacctttgtttctgattcccccactgcccacacggctgtggatgttgctctgaaa
ggtatgcacttctacagtcacctccaggctgaggacggtcactgggcgggcgactacggc
ggacccctcttcctgctcccaggcctcctgattacatgtcacgtggctaaaatacctctg
cccgaggcctggaagaaggagatggtgaggtacttgcgctccgttcagctgccagatgga
ggatggggtctacatattgaagataagtcgaccgtctttggaacagcactgagttacatc
tcacaaaggatccttggagtagagcctgacgatccagatatggtaaaagccaggaataac
ctgcacggcaaaggcggtgcagttgggattccctcgtggggtaaattctggttggccatt
ttaaatgtctacagctgggagggaatgaacacactcctaccagagatgtggctgttccct
gcttggatgccagcccacccctcaactctgtggtgtcactgtcgccaggtctacctcccc
atgagctactgctatgctgtcagactggcagctgaggaagactccctggtcctgagcctc
agacaggagctgtatctccaagactatgccaccatcaactggcctgctcagaggaacaac
gtagccgcatgtgacatgtacaaacctcacagcacactgctcacctttgcctacaaggtg
ttaaatgtgtacgaagcccatcacagcagcacactgagagaaatggctgtcaaagagctg
tatgaccacatccaggctgacgaccgcttcactaaatgcatcagcatcggaccgatctct
aagactatcaatatgctggttcgctggtatgtcgatggtccctcctctccagtctttcag
gagcatgtgtccaggatcccagactacctctggctgggactggacggcatgaaaatgcag
gggactaacggatctcaactctgggacacttgttttgctgttcaggctttccttgaggct
ggagcccaggacaccccaaggctagcagaatgcctccaagacgcccatcagtttctcacc
atcacacagattcctgagaatcctcctgaataccagaagtactacagacagatgaacaag
ggaggcttccccttcagtacccttgactgtggttggattgtggctgactgcacagccgag
ggcctgaagtcagtgatgttgttgcaggagctttgtccatccatcagccagcctgtcccc
actgagcgtctatatgatgctgtcaatgtgcttctgagcatgaaaaactcagatggtgga
tttgccacctatgaaactaagagaggagggagactcctggagctgctcaacccctctgag
gtattcggtgacatcatgattgattacacctatgtggagtgcacgtcagcggtaatgcag
gctctctggcacttccagaaggtccaccctgaacaccgtgctgaggagataaggtccact
ctgagagaaggactggagtattgcaggagggtgcagcggccagatggatcatgggaaggg
tcctggggcgtgtgcttcacatatggcatatggtttggccttgaggcttatgcttgcatg
ggtcacgtctacgaggacaaggatgtgtgtgtcgaggtgcagaaagcttgtcagttccta
ctggaccggcagatgccagacggtgggtggggggaggactttgagtcgtgtgagcagcgg
tgctacatccagagcagcactgctcagatccacaacacctgctgggctttgttaggcctc
atggctgtcaggcatcctgacaggcaggtcattgagagaggagtacagctactgattgac
aagcagctacctaatggagactggccacaggaaaatatcgcaggcgtgttcaataagagc
tgtgccatcagctacacctcctacagaaatgtgttcccagtctggacccttggccgcttc
tcaacactttaccccagcagtccgctagccgggaaggtcaagctctaa
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