KEGG   Scophthalmus maximus (turbot): 118282854
Entry
118282854         CDS       T09850                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04137  Mitophagy - animal
smau04144  Endocytosis
smau04145  Phagosome
smau04148  Efferocytosis
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118282854 (rab5b)
   04145 Phagosome
    118282854 (rab5b)
   04137 Mitophagy - animal
    118282854 (rab5b)
   04148 Efferocytosis
    118282854 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118282854 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118282854 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118282854 (rab5b)
   04031 GTP-binding proteins [BR:smau04031]
    118282854 (rab5b)
Membrane trafficking [BR:smau04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118282854 (rab5b)
 Endosome - Lysosome transport
    118282854 (rab5b)
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118282854 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   118282854 (rab5b)
  Exosomal proteins of colorectal cancer cells
   118282854 (rab5b)
  Exosomal proteins of melanoma cells
   118282854 (rab5b)
GTP-binding proteins [BR:smau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118282854 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 118282854
NCBI-ProteinID: XP_035460248
UniProt: A0A8D3B014
LinkDB
Position
14:complement(1091655..1097707)
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSPRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagcggtggccgctccaacggcacgttgccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaaggggcagttcgacgagttccaggagacgaccatcggagctgccttcctggcc
cagtccgtgtgtttggacgacaccacggtgaagtttgagatctgggacacggcgggtcag
gagcggtaccacagcctggcgcccatgtactaccgcggagctcaggcggccatcgtcgtc
ttcgacatcaccaagccggacacgttcgagcgagccaaggcctgggtgaaagagctgcag
cggcaggccagtcccaacatcgtcatcgctctggccgggaacaaggccgacctggcggag
aagagactagtagagtacgaggaagcccagacgtacgccgacgacaccggcctgctcttc
atggaaacctcggccaagacggccatgaacgtcaacgagctcttcctggcgatcgcaaaa
aagatgccaaaaacagacacgcagaatcccacacatgcggcgcggcatcgcggcgtcaac
ctccaggacccggacgcccactcgccccgagcctgctgcggcgggaactag

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