Scophthalmus maximus (turbot): 118282854
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Entry
118282854 CDS
T09850
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04137
Mitophagy - animal
smau04144
Endocytosis
smau04145
Phagosome
smau04148
Efferocytosis
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118282854 (rab5b)
04145 Phagosome
118282854 (rab5b)
04137 Mitophagy - animal
118282854 (rab5b)
04148 Efferocytosis
118282854 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118282854 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118282854 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118282854 (rab5b)
04031 GTP-binding proteins [BR:
smau04031
]
118282854 (rab5b)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
118282854 (rab5b)
Endosome - Lysosome transport
118282854 (rab5b)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118282854 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
118282854 (rab5b)
Exosomal proteins of colorectal cancer cells
118282854 (rab5b)
Exosomal proteins of melanoma cells
118282854 (rab5b)
GTP-binding proteins [BR:
smau04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
118282854 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
118282854
NCBI-ProteinID:
XP_035460248
UniProt:
A0A8D3B014
LinkDB
All DBs
Position
14:complement(1091655..1097707)
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSPRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagcggtggccgctccaacggcacgttgccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaaggggcagttcgacgagttccaggagacgaccatcggagctgccttcctggcc
cagtccgtgtgtttggacgacaccacggtgaagtttgagatctgggacacggcgggtcag
gagcggtaccacagcctggcgcccatgtactaccgcggagctcaggcggccatcgtcgtc
ttcgacatcaccaagccggacacgttcgagcgagccaaggcctgggtgaaagagctgcag
cggcaggccagtcccaacatcgtcatcgctctggccgggaacaaggccgacctggcggag
aagagactagtagagtacgaggaagcccagacgtacgccgacgacaccggcctgctcttc
atggaaacctcggccaagacggccatgaacgtcaacgagctcttcctggcgatcgcaaaa
aagatgccaaaaacagacacgcagaatcccacacatgcggcgcggcatcgcggcgtcaac
ctccaggacccggacgcccactcgccccgagcctgctgcggcgggaactag
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