Scophthalmus maximus (turbot): 118282930
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Entry
118282930 CDS
T09850
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04514
Cell adhesion molecule (CAM) interaction
smau04517
IgSF CAM signaling
smau04518
Integrin signaling
smau04672
Intestinal immune network for IgA production
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118282930 (itga4)
04514 Cell adhesion molecule (CAM) interaction
118282930 (itga4)
04517 IgSF CAM signaling
118282930 (itga4)
04518 Integrin signaling
118282930 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118282930 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118282930 (itga4)
04810 Regulation of actin cytoskeleton
118282930 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
118282930 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118282930 (itga4)
04515 Cell adhesion molecules [BR:
smau04515
]
118282930 (itga4)
04090 CD molecules [BR:
smau04090
]
118282930 (itga4)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118282930 (itga4)
Exosomal proteins of other cancer cells
118282930 (itga4)
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin alpha subunits
118282930 (itga4)
CD molecules [BR:
smau04090
]
Proteins
118282930 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
CLIPPER
Integrin_alpha
SCY_4732_
GNVR
Phage_Bf23_A1
Motif
Other DBs
NCBI-GeneID:
118282930
NCBI-ProteinID:
XP_047193140
UniProt:
A0A8D2ZTS3
LinkDB
All DBs
Position
14:complement(5227003..5245554)
Genome browser
AA seq
1033 aa
AA seq
DB search
MYPSAVGVCARCSLLLVLVQVLVQLLVLVCPVAGYSLDQDHSLEFSGPPSSMFGYSVLLH
RHKSHKWLVVGAPVANSSSNPSVRAPGAIFRCDITAESQHCQPIRANVSYCGKTCEGESD
HQWLGVSLSRQPGDKGGHIMACAHRWKNVFYSKKDSQNNKLPNGVCYRYGSDLRQGQHII
PCYRDHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTTSRGMSVYLDD
EAGAVSFGSYLGYSVGAGHFLSPVTSEVVGGAPQYNQRGKVFIFTLDSNLLRVVSEVSGN
QLGSYFGSSLCAVDLNADGLSDLLVGAPLTTGAVREEGRVHVYINQGQAKLLEAEFQLTG
SDAYAARFGETIADLGDLDDDGYHDVAVGAPQEDDLKGAVYIYNGRKDGISPSPSQRITG
STLGRDLRMFGQSLSSGIDIDDNGYQDVAVGAFLSDAAVVLRTRPVIKVKASLALPEQID
QRVALCSEHKTPTVCLNVTVCFSVWSRQFRGAIDLQYNLTSDLLHKPSFPHRFYFHGNGS
SNSTRGQVRARHGQLACTTHVAYQRKDVRDIFTPVQFEVSYSLRESNHRASSKTFPPLKP
ILQQSAGHQNTITNQTQFARSCSLVNCSTNMQLSAELVLPHQQQYFALGSGQTIVLKTSV
VNSGDDAFLPRLTLHFPNNIHYIKVLQNQDNLVSCDVTQETNSTMVVVDCSVTSLLLPAD
AQLNINFLLDVNQNSTPGDINIHVNTSSDNYERGEYLHDNSKSLLLPLKYGVNINIHGFV
NPTSFVFGDEDLTPVNCYTETFNYTYKVLNSGPSRSLDTVVEIVLPKILTPYRHRLLQVI
DLQSSHGACSISDTTVSVIEDCDVPQASFIKQLIFFFSFSSTRRMFCGRGDELCERLVCR
LGSLEAGRDATIQLETRLNPTVLLQAPGRHSIMTLESTATISSPREDPHTILVQKHPAVQ
VVVEALFTQKPSTTVKVFIIVVSLVLGLMILAALIWCLWKAGFFKRELQKKEEEFRRHSW
DYVPKSSERESVS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctcggcggtcggtgtgtgcgcgcgctgcagcctgctcctggtgctggttcag
gtcctcgtccagctcctggtgctggtctgtcccgtggcaggatacagtctggaccaggac
cacagtctggagttcagcgggcccccctcctccatgttcggatactcagtcctgctgcat
cgccacaaatctcacaaatggttggtggtcggagctccggtagcgaactcgtcctccaat
ccgtccgttcgggccccgggagccattttccgctgcgacatcactgcggagtcgcagcac
tgccaacccattcgtgctaatgtgtcgtactgcgggaagacgtgtgaaggagaaagtgat
caccagtggctgggagtcagtctgtccagacaacctggagacaagggaggacacatcatg
gcgtgcgctcaccgctggaagaacgtcttctactcaaagaaggacagtcagaacaacaag
ctgcctaacggagtctgttatcgctacggcagcgacctgaggcagggccagcacatcatc
ccctgctacagagaccaccagaggaagttcggtgaggactacgggtcatgtcaggccggc
atttcgaatttcctgaccgaggatctgatcatcatgggggctccggggacgtcttattgg
acgggttcggtcctggtcttcaacacgaccagtcgagggatgtcagtgtacctcgatgat
gaagctggtgcagtcagcttcggaagctacctgggttactctgttggagccggtcacttc
ctgagccctgttacatcggaggtggtgggcggagctccgcaatacaaccagagagggaag
gtcttcatcttcaccctcgacagcaatttgcttcgggtcgtttctgaagtgtccggaaat
cagctgggatcttactttggctccagtttgtgtgcggtggatctgaacgctgatggtctg
tcggatctgctggtcggtgcacccttgacaacgggcgccgtccgggaggagggaagagtc
cacgtgtacatcaaccaggggcaggccaaactgttggaggcggagtttcagctgactggc
agcgacgcctacgccgcccggttcggggagaccatcgctgacctgggagacctggatgac
gatggctaccatgatgtggcggtcggtgcaccacaggaagacgacctgaaaggagccgtc
tacatctataacggaaggaaggacggcatctcaccatctccatcccagagaatcaccgga
tccaccttgggtcgcgacctcaggatgttcggccagtcgctcagctctggcattgacatc
gacgataacggctaccaggatgtggcggtcggtgcgttcctctcggacgcagctgtggtt
ctcaggacccgtcccgtgattaaggtgaaggcgtctctggctctgcctgagcagattgac
cagcgggtggcgctgtgcagtgaacacaagacgccaacggtctgcctcaacgtcaccgtc
tgtttcagtgtctggtccagacagttccgaggagccatagatcttcagtataatttgacc
tctgacctcctccataaaccgtccttccctcatcgtttctatttccatggtaacgggtcg
tccaacagcacaagggggcaagtgagggcgcgacatggccagctcgcttgtacgacacac
gtggcttaccaaaggaaagacgtgagggacatttttaccccagtccagtttgaagtttct
tacagcctcagagaatcaaaccacagagcctcttccaaaaccttccctccgttgaaaccc
attctgcagcagagtgctggacaccagaacactatcaccaaccagactcagtttgctcgc
tcctgttctctggtgaactgctcgaccaacatgcagctgtcggctgagctggtgctgcca
catcagcagcagtactttgctctcggctctggacagaccatcgttttgaaaacctccgtg
gtgaactccggagacgacgccttcctgccgcgtctgacgctgcatttcccgaacaacatc
cactacattaaagtgctgcagaaccaggacaacctggtcagttgtgacgtcacacaggag
accaacagtacgatggtggtcgttgactgcagcgtcaccagcctcctgctgccggccgac
gcccagctgaatatcaacttcctattggacgtgaaccagaacagcacgcctggtgatatc
aacatccatgtcaacaccagcagtgataactatgagcgaggcgagtatctccatgacaac
tccaagagtctcctccttcctcttaaatatggagtcaacatcaacatccacggttttgtg
aatcccacctctttcgtgttcggagatgaagacctgactccggttaactgctacactgaa
acattcaactacacgtacaaggtgttaaactccggtcccagcaggtctctagacaccgtg
gttgagattgtgctaccgaagatcctcacaccgtaccgacacaggctgctgcaggtgatc
gacttgcagtcgtctcatggtgcgtgttccatcagcgacacgaccgtttcagtcatcgag
gactgtgacgtccctcaagcttctttcatcaaacaactcatcttcttcttctccttcagc
tccacacgcagaatgttttgtggccgtggcgatgagctgtgtgagcggctggtgtgtcgc
ctcgggagcctggaggcaggaagagacgccaccatccaactggagaccagactgaacccc
actgtgctactgcaagctccgggtcgtcacagtatcatgacgctggagagcacagcgacg
atctcgtcccccagagaagatccccacaccatcctcgtccagaaacatcctgcagtacag
gtggtggttgaagctctttttacccagaagccctcgacgacggtgaaggtcttcatcatc
gtcgtcagtttagttctgggtctgatgatcctggccgctctcatctggtgtctatggaag
gctggtttcttcaagagggaactccagaagaaggaggaggagttcaggagacacagctgg
gactacgttcctaagagcagcgagcgagagagcgtttcctaa
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integrated database retrieval system
