Scophthalmus maximus (turbot): 118283401
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Entry
118283401 CDS
T09850
Name
(RefSeq) vinculin-like isoform X3
KO
K05700
vinculin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04520
Adherens junction
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
smau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118283401
04520 Adherens junction
118283401
09142 Cell motility
04820 Cytoskeleton in muscle cells
118283401
04810 Regulation of actin cytoskeleton
118283401
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118283401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118283401
04147 Exosome [BR:
smau04147
]
118283401
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118283401
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118283401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
NEMO
Motif
Other DBs
NCBI-GeneID:
118283401
NCBI-ProteinID:
XP_035461198
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Position
10:complement(14064519..14089247)
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AA seq
1126 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVSSMTTVKELLPVLISAIKIFVATKSSRGAGVEEAERNRRFIFEKMSAE
INEIIRVLQLTTWDEDAWANKKDMEALKRYLALIESKMAQAKSWLRDPHGQPGDHGEVAL
RVILDEAGKVGELCAGKERKDILATAKALGQMTDQIADLRARGQGPSPGCMQRAAQCSQG
LDLLFGKVDGAARRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIAGLTARLVELRKQGKGDSPEARALAKQIGAALMTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWANNPGLDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQ
DMIGRCDRTEGLMASLADMAGRGEAEAPHARATAAQLQDSLKDLRQHMQEVMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAGNFEAHAGRLGATAEKAAAVGAANKTTVE
GIHAAVKHARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVERLTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRF
RDTVKHASDILSHTISPMVMDAKAVAGNIQDKPLQKAYLDSCLRILAAVGKVREAFQPQE
PDFPPPPPDLDQLHVSDEKAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMM
VAARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSNQPVNQPILA
AAQALHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDSGCTLRWVRKTPWYQ
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagacgatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggcgaggtggacggcaaagccatcccggacctg
acggtgccggtggccgcggtgcaggcggcagtcagcaaccttgtgcgggtggggaaggaa
acggttcagaccaccgaagaccaggtgatgaagagagacatgccccctgcattcattaag
gtggagaactcgagctcgaagctcgtccaggctgcgcagatgctaaaggcagatccatac
tcagttcccgcgcgagattacctgatcgacggatccagagggatactgtctggaacgtcc
gacctgctccttacctttgacgaggcagaggtgcgtaagataatcagagtatgtaaagga
atcctagagtatctgaccgtagctgaggtggtggagaccatggaagacctcatcacttac
accaagaaccttggtccagggatgaccaagatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaagaacacaggcagatgctagtcagctccatgaccaccgtcaaagag
ctgctgcctgttctcatatcagccataaagatttttgtcgcaaccaagagcagtcggggt
gccggtgtggaagaggcggagaggaacaggagattcatctttgaaaagatgagcgctgaa
atcaacgagatcataagagtcttacagctcaccacgtgggatgaagacgcgtgggccaat
aagaaggacatggaggctttgaagagatatcttgctttgattgagtctaagatggcacaa
gctaaaagttggctcagagaccctcatggacagccaggtgaccacggtgaggttgccctg
cgtgtgatactggacgaagctggtaaggtgggagagctgtgtgctgggaaggagaggaaa
gacatactggcaaccgcgaaggctctgggacaaatgactgaccagatcgcagatctacga
gccagaggccagggcccgagcccgggttgtatgcagcgtgcagcccagtgctcgcaggga
ttagacctgctatttggcaaagtggacggtgctgcgcgcaggctggaggctcttatcaac
gccaagcaggccattgccaggaggctggacgctgcacaggcctggctggctgatcctaac
ggcggcccagagggggaagagaacatcagagcgctacttgcagaggccaaacgcattgct
gatctgtgtgaagaccccaaagagagggatgacatcctgcgctccatcagcgagatcgca
ggactcaccgccagactcgtggagctacgcaaacagggtaaaggggacagtccggaggcc
cgtgcattggcaaagcagatcggggcggcgctgatgaccctgcagtcgaagaccaaccgg
gccgtggccaacatgagaccagccaagcccgccgtcaccttggagggcaagatggagcag
gccctccgctgggcgaacaaccctggattggacgacagaggagtaggtcaggcagcaatc
agaggaatggttggagaggggaggaggctggcgggaggcttgttaggcccatatcgtcag
gatatgatcggacgctgcgaccgaacagagggcctaatggcatctttggcagacatggcc
ggcaggggagaggccgaggctcctcatgcacgagctacagccgcacagctacaggacagc
ctcaaggacctgaggcaacacatgcaggaggtgatgacccaggaggtatctgatgtgttc
agtgacaccaccacccccatcaaactgctggctgtggctgccactgcccctcctgatgcc
cccaacagggaggaggtttttgatgagcgtgcagggaactttgaggcccacgctggtcgg
ctgggggcgaccgcggagaaggctgctgccgtgggagcagccaataagacgacagtggag
gggatacacgccgcagtgaaacacgccagggagctcacaccacaggtgacctctgctgct
cggatcttgttgaagaatcctgggaacaaagcagcgtacgagcactttgacaccatgaag
aaccagtggattgacaacgtggaaagactcaccggtctggtggacgaggccatcgacacc
aaatctctgctagatgcttccgaggaggccataaagaaagacatcgacaagtgccgagtt
gccatggcaaacgttcagccccaaatgctagttgccggagcaacaagcatagcaagacgg
gccaatcgggtcctgctggtggccaagagggaagtggagaactccgaagatccgcggttc
agagacactgtgaaacacgcgtcagacatcctctcgcacaccatctcacccatggtgatg
gacgccaaggcagtggctgggaacatacaagataaacctctgcagaaggcctacttggac
tcgtgtctgaggatcctggctgcagtgggaaaagtgagagaagctttccaacctcaggaa
cccgatttccctcctccacctccggacctggaccagctccatgtcagtgatgagaaggcg
ccacccaagccccccttgccagagggtgaggtgcctccgccgcggccccctcctccagag
gaaaaggacgaggagttcccggagcagaaggccggggaggtgctcagcgagcccatgatg
gtggccgccaggcagctgcacgacgaggctcgcaagtggtccagcaagcctgaggatgag
gaggcagtagaggagagggaggtagatgatgaagatgagtttactgatggtgaggatgac
tatgagccagagctgctgatgatgccctccaaccaacctgtcaaccaacccattctggca
gctgcccaagctctccaccaggaggcgcgcaagtggtccagcaagggcaacgacatcatt
gcggccgccaagcggatggccctgctgatggctgaaatgtctcggctggtgcgcggcgga
agcgggaacaagcgggcgctgattcagtgtgccaaggacatcgccaaggcctcggacgag
gtgacaagactggccaaagaagtggccaagcagtgcactgacagacgcatcagaacgaat
ctgctgcaggtgtgtgagcgcatcccaaccataagcactcagctgaagatcctctctacg
gtcaaagccaccatgctgggacggacgaacatcagtgaagaggagtcagagcaggccaca
gagatgttggtccataacgcccagaatctgatgcagtcagtgaaggagaccgtcagggaa
gcggaggcagcctccatcaagatccgcacggactcgggatgcacccttcgctgggtgcgc
aagaccccttggtaccaatga
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