Scophthalmus maximus (turbot): 118283424
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Entry
118283424 CDS
T09850
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118283424 (ddx43)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118283424 (ddx43)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118283424 (ddx43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
ResIII
KH_PNO1_2nd
KH-I_KHDC4-BBP
KH_2
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
118283424
NCBI-ProteinID:
XP_035461228
LinkDB
All DBs
Position
10:complement(4396655..4405891)
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AA seq
731 aa
AA seq
DB search
MSDWEDEYDAGGVAIYKPATKAAPTQWKPPCDVDRACFGVRAGARLGGSRDGRDDPGSGG
YRSWRRGGGGGCGGGGGGGGGGGGGGGDGRPYPPSADRGGRGPQRTFAGEKSDSCPPVTL
SVENASIGRIIGRGGTKIRELEESTGARIKINKGDYEGEVLLFGSSDAQQKAKDMIEDLV
ADGNSRFRNGAGRVGDYRPEGDGGVKNGSVWSADQLQASSVAPASGSIDWNSIRENRGKY
EELKWQDLPPMKKKFYMEAESVSMLTAEEVCEWRKENNNIFVDDLKEEGEKRPVPNPCRT
FLEAFELYPEIMENIERVGFVKPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFI
HMDGQLVPRAERNGPGMLVLTPTRELALQIETECSKYRYKGYKSICIYGGGDRRGQINLV
KGGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQ
TVMTSATWPTGVRRLSKSYLKNPMMAYVGTLDLAAVDTVEQTVLIVQEEEKKAYVFDFIR
NMLPLDKVLIFVGKKIVADDLSSDMCLQGMAVQSLHGDREQCDREEALKDFKDSRVRILV
ATDLASRGLDVHDITHVFNYDFPRNIEEYVHRVGRTGRAGRSGAAITLVTRENWRMAAEL
IPILERAGQEVPQELVLMAERYEKHKREKDLGNPRGGPGRGGGGGGGGGGGWGRRDGGGR
GSRDQDHNWGF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgggaggatgagtacgacgcgggcggagtagcgatctataaacccgccacg
aaagcagctccgactcagtggaaaccaccgtgtgatgtggaccgcgcatgtttcggtgtg
agagctggagccagactcggaggctcgagagacgggagagatgacccgggcagcggcggg
tacagaagttggagaaggggcggaggcggcggctgcggcggaggaggaggaggaggagga
ggtggaggcggaggaggcggcgatggtcgcccttatcccccaagcgcggaccgcggaggc
cgggggccacaacggacattcgccggtgaaaagtcggactcttgcccgcccgtgactctc
tccgtggaaaatgcctcaatagggagaataataggtcgtggaggaaccaaaatccgtgaa
cttgaagagagcacaggtgcaagaatcaagataaacaagggggattatgaaggtgaggtg
ctcctcttcggctcctctgatgcccagcagaaggccaaggacatgattgaagacttggtg
gctgatggcaactctagatttcgcaatggggctggcagggtgggagactacagaccagaa
ggtgatggaggagtgaagaacggctccgtctggtccgctgaccaattgcaggcttccagt
gtcgccccggccagtggatccatagactggaacagcatccgggagaacagggggaagtac
gaagagctcaagtggcaggacctcccacccatgaagaagaagttttacatggaggcagag
agtgtatccatgctcaccgcagaggaagtctgtgaatggaggaaagagaataacaatatt
tttgtggacgacctgaaggaggaaggggagaagcggcccgtccccaatccctgccgcact
tttctggaggccttcgagctttatccagagatcatggaaaatattgagcgagttggcttt
gtcaaaccaacccccatccagtctcaggcttggccagtgttgctgagcggcgaggacctg
atagcgatcgctcagacaggaacagggaaaaccttggcctacctgctgccagggttcatc
cacatggacggacagcttgtaccgcgggctgagcgcaatggtccaggcatgttggtgctg
actcccaccagagagctggccctgcagattgagaccgagtgcagcaaataccgatacaag
ggctacaaaagtatctgtatctatggcggaggggacaggagaggccagatcaacctggtg
aagggtggcgtggacatcgtcatcgcgacaccgggccgactgaatgatctgcagatgaac
gagctcatcaatcttcgctccatcacctacttggtgctggacgaggccgaccgtatgctc
gacatgggctttgaacctcagatcatgaagatcctcctggacatccggccagaccgacag
accgtcatgaccagtgccacctggcccaccggtgtgaggcgactgtccaaatcctaccta
aagaatcccatgatggcttacgtgggcaccctggacttagcggcggttgacacggtggag
caaacggtgctgatcgtccaagaagaagagaaaaaggcctacgtgtttgacttcatcagg
aacatgttgcccctggataaagtcctcatcttcgtcggcaagaagattgtggcggacgac
ttgtccagtgacatgtgtctgcagggcatggctgtgcagagtctccatggcgaccgtgag
cagtgtgaccgcgaggaagccctcaaggacttcaaagatagtcgagttcgtatcctggtc
gccacggacctggcgtcccgagggttggatgtccacgacataacgcacgtctttaactac
gactttccgcgtaacatagaggagtacgtccaccgcgtgggccgcactggcagagcggga
cgctcaggtgctgctatcaccctggtaacaagggagaactggaggatggccgctgagctg
attcctatcctggagcgagcgggacaggaagtcccccaggagctggtgcttatggctgag
agatacgagaagcacaagagggagaaggacttgggcaatccaagaggaggaccgggacga
gggggaggaggaggaggaggaggaggaggaggatgggggaggagagatggtggagggaga
ggaagcagggatcaagaccacaactggggattctga
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integrated database retrieval system
