Scophthalmus maximus (turbot): 118283456
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Entry
118283456 CDS
T09850
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118283456 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118283456 (polr1b)
Enzymes [BR:
smau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118283456 (polr1b)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118283456 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
118283456
NCBI-ProteinID:
XP_035461324
UniProt:
A0A2U9CHL7
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All DBs
Position
10:complement(8846275..8853135)
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AA seq
1134 aa
AA seq
DB search
MDFSTKWTDLPKGPSLKNLTRGGFGVLKETQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFMAKNDRISLSFVESTINNPMVAKGNVCRDMRVFPAECRGRRCSYKGKLVADVSW
SVNGVPKGIIKQSLGQVPIMVKSQLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGLSMHCVREEHTAINMNLHYLDNGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVSEMLRIVMEEGCTTRSKV
LDYLGERFRVKMNLPEWHTDEQCANFLLNECICIHLKSDVEKFYLLCMMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERMAAWLVTVKMAFDKRGKKLSGGWGVENIIKIL
NMGTEVTKPFEYLLATGNLNSKSGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTSSTTSLPGLLCSLGVT
PVDGSPGQAFSDCYPVVLDGALVGWLETELVPVVVDSLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVHNLALGKEELIGTFEQLYINVGIMEDEIEQGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDGVVFGAKPGDPKVNERLDADGLPHIGSTIQYGDPFYSYMNLNTGQTFINYY
KSQEACVVDNIKICSNDGGSGHFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPTED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGEMLRAGGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVTQICIDCGSLLSPLL
EKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcaacaaagtggacagatctacccaaaggcccgagtctgaagaacctgacc
cggggagggttcggcgtcctgaaggagactcaacacgccgccgtccaggacctgaccaag
gctcacatcgagtcgttcgaccaggctgtcaccgacggactgagccgcgttgtacaggcc
atccctcccctggagttcatggcaaaaaatgacaggatcagcctttcgttcgtcgaatcc
accatcaacaacccaatggtcgccaagggcaacgtctgcagggacatgagggtgtttccg
gccgagtgcagggggcggagatgctcgtacaaaggaaagctggtggctgacgtcagctgg
tcggtcaatggagttcccaaaggcatcatcaaacagtccctgggtcaggtgccaatcatg
gtgaagtcccagctgtgcaacctccacggtatgtcccctaaggagcttgtcgaacaccat
gaagaagctgaggaaatgggagggtatttcattgtgaatggaattgagaaagttatccga
atgctgatcatgcctaggaggaactatcctattgccatgtcaagacctaagtggaagagt
cggggccagggctacactcaatatggcctttctatgcattgtgtaagggaagagcacacc
gccatcaacatgaacctacattatctagataatgggactgtgatgctgaacttcatctac
cagaaagagctcttcttcctcccgctaggctttgcactcaaggccttggtggacttcaca
gacttccagatttaccaggaactcatcaagggccgtgaggacaattccttctacaagagc
tgtgtatcagagatgctgcgtattgtcatggaggagggctgcaccacccgcagcaaggtg
ctcgactaccttggagagcgcttcagggttaaaatgaaccttcctgagtggcacacagac
gagcagtgtgcgaacttcctgctaaatgagtgcatctgtatccacctgaagtcagacgtg
gagaagttctaccttctctgtatgatgacaaggaagcttttcacgtttgccaagcaggag
tgcatggaggagaaccctgacagcatcatgtgtcaggaagtgctaactcctggccagctc
tacctcatgttcctgaaggagagaatggctgcctggttggtgactgtaaaaatggctttt
gacaagagaggcaaaaaactgagtggaggatggggtgtagaaaacataataaagatatta
aacatgggcactgaagtgaccaaaccctttgaatatctgctggccaccgggaacctcaat
tccaaatcaggtcttggcatgctgcagaacacaggactgtgtgtcgtcgccgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcagcgttcgccaag
atgaggaccacctctgttcgtaagctgctgcctgagtcatggggctttctgtgtcctgtc
cacaccccggatggagagccgtgcggcctcatgaatcacatgacagccagctgtgagatt
gtagcaccgacctcctccaccacatccctgcctggcctgctctgttctctcggtgttact
ccagtggatgggtctcctggtcaagccttctcagactgctaccctgtggtccttgatggg
gctctggtaggctggttggagacggaattagtcccagttgtggttgactcactgcgcagg
ttcaaggtattgcgagagaagaagatccctccctggaccgagattgtcctggttcccaaa
acaggcaaggccagcctgtacccaggcctgttcctcttcacaacaccctgtcggatggtg
cggcctgttcacaatttagctcttggaaaggaagagttaattggtaccttcgaacaactt
tatatcaatgtgggcatcatggaggatgagattgagcaaggagtcaccacacaccaggaa
ctgttccctcacagtatgctgagcgtggtggctaacttcatcccctactcagaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaaacagactatgggtttccccctg
cactcgttcatggatcgctccgataacaagctgtaccggctccagaccccacagagccca
ctggtcaggccctacatgtacgaccactacaacctggacaactaccctagtggcacaaac
gccattgtggccgtcatatcctacacaggctatgacatggaagatgcaatgattgtgaac
aagtcatcgtgggagagaggctttgcccacggaagcatctacaagactgagctggtggat
ctggcggacaaggtgaggggagaagacggcgtggtgtttggggccaagccaggtgatcca
aaggtgaatgaaagactggatgctgatggactccctcacattggatcaacaattcagtat
ggagaccctttctacagctacatgaacctcaacacgggtcagaccttcatcaactactac
aagagccaagaggcctgtgtggtcgacaatataaagatctgcagcaacgacggcggctca
ggccattttaaacgagtttgcattactgtgcgagtgccacgaaaccccaccatcggtgac
aagtttgccagtcgccacggtcagaagggcatcctgagccgcctgtggccgaccgaggac
atgcccttcacagagagcgggatgactcccgacattctctttaacccccacggcttcccc
tcccgcatgaccatcgggatgctgattgagagcatggccggcaagtccggcgccctgcac
ggcctgagccacgacgccacacccttcaccttctccgaggagaactccgcactggagtac
tttggtgaaatgctccgggccggtggctacaactactacggcacagagcggctctacagt
ggcctgagcggtctggagcttgaggctgacatttttatcggggtggtctactaccagcgg
ctacgtcacatggtctccgacaaatttcaagtgaggaccacgggagcgcgagacaaggtg
accaaccagcccgtgggagggaggaacatccagggaggcatccgattcggcgagatggag
cgagacgccctgctggcccacggctcgtccttcctgcttcacgatcgccttttcaactgc
tcagaccgatcggtaactcaaatttgcattgactgcggcagcctcctgtcccctctgtta
gagaaaccaccaccctactggtcggccatgcgccaccgcaagactgtgtgcacactgtgt
ggcaaaagtgactctattgactctgtgtctgtcccttatgtcttccgctactttgtagcc
gagctcgccgcaatgaacatcaaagtcaaattagatgtcaagtaa
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