Scophthalmus maximus (turbot): 118283570
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Entry
118283570 CDS
T09850
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118283570 (btaf1)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118283570 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_2
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_MROH2B_C
HEAT_GCN1_C
HEAT_GCN1
HEAT_EZ
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
118283570
NCBI-ProteinID:
XP_035461587
LinkDB
All DBs
Position
10:8605575..8624172
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AA seq
1854 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPSPKPKEESCEDLSPEDSSCDRLSFYNFDISRLLKHGASLLGS
AGAEFELQDDKAGEMDPKERLARQRKLLQKKLGLDIGATIGMDTEELFNDEDLDDNCQLS
GLRAHGSKVTAGSSSRNHVPIHAAELIDSEFCPGMSNRQRNKAKRMAKLVAKQRSRDVDP
NEKSNDSFEGEPEEKRRKTTNVIIDQPATENKVLIDNVPDNSSLSEETHEWPLESFCEEL
CNDVFNPSWEIRHGAGTGLREILKSQGAGGGKLVGSTAEQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAITVGLQDLDDDVRAVAASSLIPVVEGLVQLLPSKVP
YIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLYTLLYKADQSCAMWINPILQDMLRHIFQSCILESNEEILELIQKVWMEL
LSQAPQQYVVAASCPWMGAWLCLMMQASQIPIDLNMLLEVKARSKDKAGAKARLGSNQVK
ETVQEYIAGAETVTDDSVTRDYVVVRARLMAAKLLGALCRCICHPQLNASSQEIRPAESL
GQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQVVSSMVQPRLLAILSEQLYYDEIAIP
FTRMQNECKQLTALLADSQIDLQDRLNCSVFTIDQASELVTTVFTESTAGLSVTSKPWQA
LDSKRQQAQATVVETNAEWQQLHLRVHMFTACAVINLQVLPDKLNPLVRPLMEAIKREEN
TLIQGYTAAFISKLLQQCAGRSPCPNPKIIKNLCASACVDSSVTPSSACPVPPTQENAKG
GGLEKDCMHHMVNKTRGIITLYRHQRAAFAVTSKRGPAPKAPKPPSTELPPGSTISTDND
ESRKPFLIQRRGAEFSLTTVARHFSEDLTKSLPYLWENTVGPLRTAVTENQCIDRQVQLE
RGDAAAQDLVNSLQVLEVIAGAMAPELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVL
SKLAMLETMNSFLERVLPWLAAIEDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVLG
RMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQLLDSRKL
ENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHCLRA
QEYAKTKAADCSPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERMRLQHLV
KKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVILSG
TPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALH
RQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSSLQVQLYEDFAKSRAKASVEDSISVSST
EEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTLQHPEYKRITEQLACQNSNLRDIQHAP
KLSALKQLLLDCGLGGGGGSEGGPEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPNVTY
LRLDGSVPAGHRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL
QAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQDNASLQSMGTDQL
LNLFSLDKDEKGEQTASTSGKDSMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcgagacttgatcgtttgttcatcctgctcgacaccggaacaacaccggta
accagaaaggcggcagcccagcagcttggagaagtggtcaaactccacccgcatgaactc
aacaaccttctttcaaaagtcttgacatacctaaggagtcccaactgggacactcgaata
gcagcaggccaagctgttgaggccattgtgaagaatattcctgagtgggacccgtccccc
aaacccaaagaagagtcttgcgaagacttgtctccagaggactcctcttgtgaccggttg
agtttctacaacttcgacatctctcgtctactcaaacatggggcctctctgctgggatct
gctggggcggagtttgagctgcaggatgacaaagctggagagatggaccctaaggaaaga
cttgctcgccagaggaagcttcttcagaagaagttgggtctggacattggtgccactatc
ggaatggacacagaggagctattcaatgacgaggaccttgacgataactgtcaactaagt
ggacttagagcccatggaagcaaagtcacagctggatccagctcccgcaaccacgttccc
attcatgctgctgagttgattgactcagagttctgtccaggcatgagcaatcgtcagagg
aataaggctaagaggatggctaaactagtggcaaaacaacgatccagagacgtggatcca
aatgaaaagagtaatgacagttttgagggtgaacctgaagaaaagcgaaggaaaaccacc
aatgtcattattgatcaaccggcaacagagaataaagtcttaatcgacaacgttccagac
aactccagtctttcagaagagacacatgagtggcctctggagagcttctgtgaagagctc
tgcaatgatgtcttcaatccttcgtgggagattcgtcacggtgctggtacaggtcttaga
gaaatcctcaagtcccaaggcgctgggggtggaaagttggtgggaagcactgcagaacag
atgttgcgacagcatcaggagtggatagaggacctggtcatccgcttactctgcgtcttc
gctctggaccgctttggtgattttgtatcagatgaggtggtggctcctgtcagggagaca
tgtgcccagactcttggtgtggcccttcgccacatgaatgaaactggtgtttccatgacg
gtggacgttctgctgaagctgcttaaagaagaccagtgggaggtccgtcatggaggcctg
ctcggcatcaagtatgccctggctgtccggcaggacttgatctctgtgttactgccccgg
gtgctccctgccatcactgtcggcctacaggaccttgacgatgatgtcagagctgtggcg
gcttcatccctcatccctgtggtggaaggcttggtacagctactgcccagtaaggtgccc
tatatagtgaacacactatgggatgcacttctagacctggacgacctcactgcttccacc
aacagcatcatgacattgctgtcctcactgctcacctacccacaagtccgacagtgcagc
atgcagcagtcattaactgtcctggttcctcgtgtttggccgttcttgagacacactata
tcatcagtgagacgtgcagcactggaaactctttacactctgttgtataaagctgaccag
agctgtgcaatgtggatcaaccccatcctacaagatatgctccggcacatcttccagtcc
tgcatactggagagcaatgaagaaatccttgaactgatccaaaaggtgtggatggagctg
ctgtctcaggccccccagcagtatgtggttgcagccagctgtccgtggatgggtgcctgg
ctctgtctcatgatgcaggcctcacagattcctatagacctgaacatgctgctggaagtg
aaagctcgatccaaggacaaggctggtgcaaaggctcgactggggtccaatcaggtgaag
gaaacggtccaggagtatatcgcaggggctgagactgtgacggacgactctgtgacgagg
gactacgtcgtggttcgagctcgcctcatggctgccaaattgctgggggctctgtgtagg
tgtatctgtcaccctcagctcaatgcttcatctcaggagatccgaccagccgagtctttg
ggccagctgttgctcttccacctcaactccaagtctgccctgcagcgcatagctgtggct
ctggtgctttgcgagtgggctgcactgcagaaggattgccaggtggtgtcatccatggtg
caacctcgtcttctggccattctgtctgagcagttgtactacgatgaaatcgccatcccc
ttcacacgcatgcaaaatgagtgcaagcagctcaccgctttgctggccgattctcaaata
gatcttcaagaccgcctcaactgtagcgttttcaccattgaccaagctagtgaactggtt
accaccgtctttacagagtcaacagcaggtctgagcgtgacgtctaagccgtggcaggcg
ctggacagtaagcggcagcaggctcaggcgacagtggtggagaccaacgcggaatggcag
cagctgcatctgcgcgtccacatgttcacagcatgcgctgtcatcaacctgcaagtgctt
cctgacaagcttaacccactggtccggcctttgatggaggcaatcaagcgggaggaaaac
accctgattcagggttacacagctgcttttatatccaagctgttgcagcagtgtgctgga
cgctcgccttgccccaaccccaagatcatcaaaaacctctgtgcctcggcctgcgtggac
tcgtcagtcacaccatcgtccgcctgccccgtgccccccacacaggaaaatgccaaaggt
ggtgggttggaaaaagactgcatgcatcacatggtcaacaaaacccgcggcatcatcaca
ctatatcgtcaccaaagagcagcatttgctgtcactagtaagagggggcccgctcctaaa
gccccgaagcccccctcaacagagcttcctcctggcagcaccatcagcaccgataatgat
gagagcaggaagccatttcttattcagagaagaggggcagagttctcccttacaactgtt
gccaggcacttcagtgaagacctcaccaagtctcttccttacctctgggagaacaccgtg
ggaccgttgaggacagcggtgacggaaaatcaatgcatcgacagacaggtccagctggag
aggggagacgctgcagcccaggatttggtcaactctctgcaagttctggaggtcatcgct
ggggccatggctcctgaactgaaaccgttgttactggagcacctaccgcatctgttcacc
tgcctgcagcacccatacacagcggtgcgtcacatggccgcgcgctgtgtgggcgtgctc
agtaagctggcaatgctggagaccatgaacagtttccttgagcgcgtcctcccatggtta
gctgccattgaagactgcaccaaacaggagggagccatcgaggctttagcctgtgtcatg
gagcagctggatgtggacatcgtaccgtacattgtgctgctggttgtaccagttctgggc
cgtatgagcgaccccagtgacagcattcgttttatggccacgcagtgctttgccacactc
atccggcttcttccgctagaggcgggtataccagaccctccagccatgtctgcagatctt
atccgccagaaagccagagaacgccacttcctggagcaactgttggatagcagaaagttg
gagaactataagatccctgtgcccattaaggctgagctcaggaagtaccagcaggacggc
gtgaactggctctccttcctgaacaaatacaagctgcacgggatcctgtgtgatgacatg
ggtctcgggaagacgctgcagtccatctgcattctggcaggagatcactgcctcagggca
caagaatatgccaagacaaaggccgcagactgcagccccctgccctccctggtggtctgt
cctcccacactcactggccactgggtggatgaagtgggcaagttctgcagcagagaatac
ctcaacccactgcactacacagggcctcctacagaacggatgcggttgcaacaccttgtg
aagaaacacaatctagttgtagcctcttatgatgttgtacgtaatgacatcgactttttt
agaaatatcaaattcaattactgtattcttgacgagggtcatgtcatcaagaacgggaaa
accaaactttccaaagccattaagcagttggcggccaacttccgggtcatcttgtcagga
acacccattcagaacaacgtactcgagctctggtcgttgtttgacttcctcatgccgggg
ttcctcggaacagagcggcagtttgctgcgcgctacggtaaacccatcttggccagccgc
gacgccaaaagttcctcgcgggaacaggaggcaggtgtcctggcgatggaggccctacat
cgccaggtgctccccttccttctgaggaggatgaaggaggacgtcctccaggaccttcct
cctaaaatcatacaggattattactgcaacttgagctctttacaggttcagctgtacgaa
gactttgccaagtctcgagccaaggccagtgtggaggacagcatctctgtgtcttccaca
gaagaggaggagaagcccaagctgaaggccacgggccacgtcttccaggccctgcagtac
ctgcggaagctttgtaaccaccccagcttggtcttgaccctgcagcatccagagtacaaa
cgcatcaccgagcagctggcgtgtcagaactccaacctgcgggacattcagcacgcgccc
aaactctccgctctcaaacaattgttgctggactgtggtcttggtggtggcgggggatcg
gagggaggtcctgaggccgtggtggcccagcatcgcgtgctcatattctgtcagctgaag
agcatgctggacattgtggagcacgacctgctgaaacccaaactgcccaacgtcacctac
ctgaggctggacggcagcgtgccggctggccatcgccacgccatcgtctccaggtttaac
aatgacccttccatcgacgtgctgctgctcaccacccacgtcggtgggcttggtctgaac
ctgacgggagctgacactgtggtgtttgttgaacatgactggaaccccatgagggacctg
caagccatggaccgtgctcataggataggacagaaacgggtcgtgaacgtgtacaggctg
atcacacggggcacgctggaggagaagataatgggtctgcagaaattcaagatgagcatc
gccaacacggtcatcagccaagacaacgccagcctgcagagtatgggcaccgaccagctc
ctcaacctcttcagtcttgacaaggatgagaagggtgagcagacggcgtcgacctcgggt
aaggactccatgaagtcggtgctggacggcttgggagagttatgggaccagcagcagtac
gacacagagtacaacctggacagcttcatgcactcgctgcagtag
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