Scophthalmus maximus (turbot): 118283647
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Entry
118283647 CDS
T09850
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118283647 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118283647 (ercc6)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118283647 (ercc6)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118283647 (ercc6)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118283647 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Pneumovirus_M2
DegQ
Motif
Other DBs
NCBI-GeneID:
118283647
NCBI-ProteinID:
XP_035461787
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All DBs
Position
10:14275116..14290897
Genome browser
AA seq
1456 aa
AA seq
DB search
MPVEGSEDHVPSSLSSPASAALTPGGTEDDGAAGGGSAVCAFPENSQGSEAAAAYPANTG
PEEGNSAGKKSGALLQIDRQRIRAAFASSGADELEGLGVAVYDQDVLEQGVLQQVDEAIQ
EASQAAAKAEAEKEYQSVLDDVRSVTSSLKHINKIIEQLSPYAASSKDISRKVESVKRQK
ENKEKQLKKVRAKQKRLQAILGGEDTQRVEAELLAEDDGEEAGPSTLGSMLMPAQETEWE
ELIRTGHMTPFGTRIPQKEVKKEPRKLMLAEDSAFDQYLTDQAKLATERKRVPLLKKKRQ
SGLSPDKQAGVKTNRTVSPKDKKLKKRIRKLQISALKVHPKARPKAVPQLPKSKRKHQTE
GEESQSDGSEYLPTDETIDPDQEDREAMEEGFGEDDDDEDEDYELKPYKRKTEGRARKKA
KKKEDSGEEYCPESSEEEEDGEKNGKLKTFKDDGDVDYYRQRIRRWKRQRLREREEKRER
GEELTDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQ
VISFLAGLSYSKLRTRGCNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETG
SFTSSKERLIPEIASCHGILITSYSAVRNLQDALQRYDWHYIILDEGHKIRNPNAGVTTA
CKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGMLPVFMEQFSVPITMGGYSNASP
VQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEDQRQVYQGFLD
SKEVYQILNGDMQVFSGLIALRKMCNHPDLFSGGPRILRGIPEDQLTEEEQFGFWKRSGK
LIVVESLLRLWFKQSHRVLLFSQSRQMLHILEVFVRENNYSYLKMDGTTPIASRQPLVAR
YNEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIY
RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSDPDGAQGTETSA
IFAGTGSDVKAPKKHDRLRPPHMLNRGRHAHKHSSANQNETGADNRHSSTNFPALRDGNT
SVCIKNSPGKINIPTDSQSTNHSVVDVKPNISTNTQHTEEKSRDCDAAEPAGNNSTSSHR
HRRKDSALTSPQKHREKRKHCDSADSDKRAHRKRKHSQGARFEGQRISHLVKKRSFNKAE
NEDNETEDEKKSDDYVLAKLFKKSGIHSVMQHDTIMEASNPDYVLVEAEANRVAKDALKA
LKVSRQQCRLPYNRPPPPPARKRFGQKKNSLLVAPSVQSVPTPSKCKDAAIVQKSLSKKP
GAGAHFSGEGAEGNSNSTPLSSSSLLVKMKARNHLSMPSGQREEAGEDEDGSGAPVRGSP
PPPPTEHDELLVDVRNFIAFQATVDGQATTQEVLGYFKPRLTKQQAPVFRELLRSVCDFH
RTSGQDGIWKLKEHFR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgaaggttcagaggaccacgtgccctcctctctctccagcccggccagtgcc
gcgctcaccccgggagggacagaggatgatggggctgcaggagggggatcagcggtctgc
gctttccccgaaaacagtcagggctccgaggcggctgcagcctatcctgccaacactgga
cccgaggagggcaacagcgccggcaagaagtccggagccttgttgcagatcgaccggcag
cgcatccgagcagcgtttgccagctctggggcagatgaactcgagggcctcggcgtggcc
gtgtatgaccaggacgtccttgagcaaggtgtcctgcagcaagtggacgaggcgattcag
gaggccagtcaggctgctgccaaagcagaggctgagaaggagtaccagtctgtgctcgat
gatgtcaggtccgttacatcctctctgaaacatatcaacaagattatcgagcagctgtct
ccctatgctgcttccagcaaagatatcagtcggaaggtcgaatcggtcaaacggcagaaa
gaaaataaggagaaacagctgaagaaagtcagagccaaacagaaacgacttcaggccatt
ctgggaggagaggatacccaaagggttgaagctgagcttttggcagaagatgatggagag
gaagccgggccgtccacactgggcagcatgctcatgccagctcaggagactgaatgggag
gagcttatccggacaggtcacatgaccccatttggaacccgaatccctcagaaagaggtg
aagaaggagcctcggaaactgatgcttgcggaggattcggcctttgaccagtacttgaca
gaccaggccaagttggctactgagaggaagagagtccctcttctaaaaaagaagagacag
tccggactcagccctgacaagcaagccggggtgaaaaccaacagaactgtttcccctaag
gataaaaaactaaagaagcgcatacgaaagctgcagatatctgctctgaaggtccatcct
aaggctcggcctaaggctgtgccccaactccctaaatcaaagaggaagcatcaaaccgag
ggagaggagagccaaagcgatgggtcagagtatctgcccactgatgagaccatagatcct
gaccaagaggacagagaagccatggaggagggctttggggaggatgatgatgatgaggat
gaagactatgagctgaaaccatacaagagaaaaactgaagggagagcgaggaagaaagca
aagaaaaaggaggacagtggggaagagtactgccctgagagttcagaggaagaggaggat
ggggaaaaaaatggaaaactgaaaacatttaaagatgatggagatgtggactactacaga
cagcggataaggagatggaagcgacaacgtcttcgagaaagagaggagaagagggagcga
ggtgaggagctgacggatgacagtgatgcagagtttgatgaaggcttcaaagtgcctggt
ttcctctggaaaaaactctacaagtaccagcagacaggtgtgcgctggctgtgggaactc
cactgtcagcaggcgggcggcatcctgggagacgagatgggattgggtaaaaccatccag
gtcatcagctttctggctggactgagctacagcaaactgaggaccagaggatgcaactat
aggtacgttggtctgggtcctacagtcattgtgtgcccagctacagtcatgcaccagtgg
gtgaaggagtttcacacctggtggcctcctttccgagtggctgttctgcatgaaactggc
tccttcaccagcagcaaggaaaggctcattccagaaatagcatcatgtcacggtatcttg
ataacctcctattcagctgttaggaatctgcaggacgccttgcagcgatacgattggcac
tacattatactggacgagggccacaagatcaggaatccaaatgctggggttacgaccgcc
tgcaagcagtttcgtactccccacaggttcatcctgtcaggttctcccatgcagaacaat
ttgaaggagctgtggtctctgtttgactttgtcttccccgggaaactgggcatgttacct
gtgttcatggagcagttctctgtgccaatcaccatggggggatacagcaatgcctcacct
gtacaggtccagacagcgtttaagtgtgcatgtgtgctgagggacaccataaatccttac
ctgctcagaaggatgaaggcagacgtcaaggccaacctctccttacctgacaaaaatgaa
caggttctgttttgcaaattaacagaggaccagcggcaggtgtaccagggcttcctggat
tccaaagaggtctaccagatactaaacggggacatgcaggtattttcaggtttgatagcg
ctccgtaaaatgtgtaaccacccggaccttttctctggcggccctcggatactgagggga
atcccagaggaccagctaaccgaggaggaacagtttggcttttggaagcgctcgggcaag
ctgatagtggtggagtcactgctgcgtctctggttcaaacagagccacagagtcctgctc
ttcagtcagtctagacagatgttgcacatcttggaggtgtttgtgagggagaataactac
tcctacctgaaaatggacggcactaccccgatagcttcccgacagccgctcgtcgctcgg
tacaacgaggacaaatccatttttatcttcttgttgaccactaaagtcggaggtctggga
gtcaatctgactggagccaacagagtcatcatctatgacccagactggaaccccagtact
gacacacaggcacgggagcgagcgtggaggatcggtcagaagcagcaagtgaccatctac
agactgctgaccgcagggaccatcgaggagaaaatctaccacaggcaaatcttcaaacag
tttctgaccaatcgtgttctgaaggaccccaaacagagacgcttcttcaagtccaacgac
atctatgagctattcaccctgtctgaccctgatggagctcagggaacagagaccagcgcc
atatttgcaggtacaggctctgatgtcaaggcacctaagaaacacgatagactaaggcca
ccgcacatgctgaaccgtggcagacacgcacataaacactcctcagcaaaccagaacgaa
accggcgcagacaaccgacactcctcaacaaattttcctgcattaagggatggaaatacc
tccgtgtgcattaaaaactctccgggtaaaattaacatcccgacggacagtcaaagcacc
aatcacagcgttgtggacgtaaagccaaatatttcaacaaatacgcagcacacagaagaa
aagagcagagactgtgacgcagccgagccagcggggaacaactcaaccagctcacaccga
cacagacgcaaagactctgccctgacgagcccacagaaacacagggagaagaggaagcac
tgcgactcggccgactcggacaaacgcgcgcacaggaaacgcaaacactcccaaggtgct
cggttcgaaggccagcgcatctctcacttagtgaagaaaaggtccttcaacaaagcggag
aatgaagacaacgagacggaggacgagaagaaatccgacgattatgtcttggcaaagctc
ttcaagaaatccggtatccacagtgtgatgcagcatgacaccatcatggaggcgtccaac
ccggactatgttcttgtggaggctgaagccaaccgagtggccaaagatgccctgaaggcc
ctgaaggtttctcgccagcagtgcagactgccttataatagaccccctcctccgcccgca
aggaaacggtttggacaaaagaagaattcgctcctggttgcaccctcagttcaatctgtc
cctactccgagcaaatgcaaggatgctgctattgttcagaagtctttgtcaaagaagcct
ggcgcaggggctcactttagcggggagggggccgaaggtaactcaaactccaccccgctc
tcttcctcctccctgctggtcaagatgaaagcccgcaaccacctcagcatgccctcgggc
caaagggaagaagcgggggaagacgaggacggctccggagctccagtgaggggctctccc
ccgccaccgcccaccgagcacgacgagctgctggtggacgtgcgcaacttcatcgccttc
caggcgaccgtggatggacaggccaccacccaggaagtgctgggctatttcaaaccaaga
ctaaccaagcagcaggcgcccgtcttcagagagctgctcaggagcgtctgcgacttccac
aggacgtctggtcaggacggcatctggaaactgaaggagcactttcgctga
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