Scophthalmus maximus (turbot): 118283647
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Entry
118283647 CDS
T09850
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118283647 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118283647 (ercc6)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118283647 (ercc6)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118283647 (ercc6)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118283647 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Pneumovirus_M2
DegQ
Motif
Other DBs
NCBI-GeneID:
118283647
NCBI-ProteinID:
XP_035461787
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All DBs
Position
10:14275116..14290897
Genome browser
AA seq
1456 aa
AA seq
DB search
MPVEGSEDHVPSSLSSPASAALTPGGTEDDGAAGGGSAVCAFPENSQGSEAAAAYPANTG
PEEGNSAGKKSGALLQIDRQRIRAAFASSGADELEGLGVAVYDQDVLEQGVLQQVDEAIQ
EASQAAAKAEAEKEYQSVLDDVRSVTSSLKHINKIIEQLSPYAASSKDISRKVESVKRQK
ENKEKQLKKVRAKQKRLQAILGGEDTQRVEAELLAEDDGEEAGPSTLGSMLMPAQETEWE
ELIRTGHMTPFGTRIPQKEVKKEPRKLMLAEDSAFDQYLTDQAKLATERKRVPLLKKKRQ
SGLSPDKQAGVKTNRTVSPKDKKLKKRIRKLQISALKVHPKARPKAVPQLPKSKRKHQTE
GEESQSDGSEYLPTDETIDPDQEDREAMEEGFGEDDDDEDEDYELKPYKRKTEGRARKKA
KKKEDSGEEYCPESSEEEEDGEKNGKLKTFKDDGDVDYYRQRIRRWKRQRLREREEKRER
GEELTDDSDAEFDEGFKVPGFLWKKLYKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQ
VISFLAGLSYSKLRTRGCNYRYVGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETG
SFTSSKERLIPEIASCHGILITSYSAVRNLQDALQRYDWHYIILDEGHKIRNPNAGVTTA
CKQFRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGMLPVFMEQFSVPITMGGYSNASP
VQVQTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCKLTEDQRQVYQGFLD
SKEVYQILNGDMQVFSGLIALRKMCNHPDLFSGGPRILRGIPEDQLTEEEQFGFWKRSGK
LIVVESLLRLWFKQSHRVLLFSQSRQMLHILEVFVRENNYSYLKMDGTTPIASRQPLVAR
YNEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIY
RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSDPDGAQGTETSA
IFAGTGSDVKAPKKHDRLRPPHMLNRGRHAHKHSSANQNETGADNRHSSTNFPALRDGNT
SVCIKNSPGKINIPTDSQSTNHSVVDVKPNISTNTQHTEEKSRDCDAAEPAGNNSTSSHR
HRRKDSALTSPQKHREKRKHCDSADSDKRAHRKRKHSQGARFEGQRISHLVKKRSFNKAE
NEDNETEDEKKSDDYVLAKLFKKSGIHSVMQHDTIMEASNPDYVLVEAEANRVAKDALKA
LKVSRQQCRLPYNRPPPPPARKRFGQKKNSLLVAPSVQSVPTPSKCKDAAIVQKSLSKKP
GAGAHFSGEGAEGNSNSTPLSSSSLLVKMKARNHLSMPSGQREEAGEDEDGSGAPVRGSP
PPPPTEHDELLVDVRNFIAFQATVDGQATTQEVLGYFKPRLTKQQAPVFRELLRSVCDFH
RTSGQDGIWKLKEHFR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgaaggttcagaggaccacgtgccctcctctctctccagcccggccagtgcc
gcgctcaccccgggagggacagaggatgatggggctgcaggagggggatcagcggtctgc
gctttccccgaaaacagtcagggctccgaggcggctgcagcctatcctgccaacactgga
cccgaggagggcaacagcgccggcaagaagtccggagccttgttgcagatcgaccggcag
cgcatccgagcagcgtttgccagctctggggcagatgaactcgagggcctcggcgtggcc
gtgtatgaccaggacgtccttgagcaaggtgtcctgcagcaagtggacgaggcgattcag
gaggccagtcaggctgctgccaaagcagaggctgagaaggagtaccagtctgtgctcgat
gatgtcaggtccgttacatcctctctgaaacatatcaacaagattatcgagcagctgtct
ccctatgctgcttccagcaaagatatcagtcggaaggtcgaatcggtcaaacggcagaaa
gaaaataaggagaaacagctgaagaaagtcagagccaaacagaaacgacttcaggccatt
ctgggaggagaggatacccaaagggttgaagctgagcttttggcagaagatgatggagag
gaagccgggccgtccacactgggcagcatgctcatgccagctcaggagactgaatgggag
gagcttatccggacaggtcacatgaccccatttggaacccgaatccctcagaaagaggtg
aagaaggagcctcggaaactgatgcttgcggaggattcggcctttgaccagtacttgaca
gaccaggccaagttggctactgagaggaagagagtccctcttctaaaaaagaagagacag
tccggactcagccctgacaagcaagccggggtgaaaaccaacagaactgtttcccctaag
gataaaaaactaaagaagcgcatacgaaagctgcagatatctgctctgaaggtccatcct
aaggctcggcctaaggctgtgccccaactccctaaatcaaagaggaagcatcaaaccgag
ggagaggagagccaaagcgatgggtcagagtatctgcccactgatgagaccatagatcct
gaccaagaggacagagaagccatggaggagggctttggggaggatgatgatgatgaggat
gaagactatgagctgaaaccatacaagagaaaaactgaagggagagcgaggaagaaagca
aagaaaaaggaggacagtggggaagagtactgccctgagagttcagaggaagaggaggat
ggggaaaaaaatggaaaactgaaaacatttaaagatgatggagatgtggactactacaga
cagcggataaggagatggaagcgacaacgtcttcgagaaagagaggagaagagggagcga
ggtgaggagctgacggatgacagtgatgcagagtttgatgaaggcttcaaagtgcctggt
ttcctctggaaaaaactctacaagtaccagcagacaggtgtgcgctggctgtgggaactc
cactgtcagcaggcgggcggcatcctgggagacgagatgggattgggtaaaaccatccag
gtcatcagctttctggctggactgagctacagcaaactgaggaccagaggatgcaactat
aggtacgttggtctgggtcctacagtcattgtgtgcccagctacagtcatgcaccagtgg
gtgaaggagtttcacacctggtggcctcctttccgagtggctgttctgcatgaaactggc
tccttcaccagcagcaaggaaaggctcattccagaaatagcatcatgtcacggtatcttg
ataacctcctattcagctgttaggaatctgcaggacgccttgcagcgatacgattggcac
tacattatactggacgagggccacaagatcaggaatccaaatgctggggttacgaccgcc
tgcaagcagtttcgtactccccacaggttcatcctgtcaggttctcccatgcagaacaat
ttgaaggagctgtggtctctgtttgactttgtcttccccgggaaactgggcatgttacct
gtgttcatggagcagttctctgtgccaatcaccatggggggatacagcaatgcctcacct
gtacaggtccagacagcgtttaagtgtgcatgtgtgctgagggacaccataaatccttac
ctgctcagaaggatgaaggcagacgtcaaggccaacctctccttacctgacaaaaatgaa
caggttctgttttgcaaattaacagaggaccagcggcaggtgtaccagggcttcctggat
tccaaagaggtctaccagatactaaacggggacatgcaggtattttcaggtttgatagcg
ctccgtaaaatgtgtaaccacccggaccttttctctggcggccctcggatactgagggga
atcccagaggaccagctaaccgaggaggaacagtttggcttttggaagcgctcgggcaag
ctgatagtggtggagtcactgctgcgtctctggttcaaacagagccacagagtcctgctc
ttcagtcagtctagacagatgttgcacatcttggaggtgtttgtgagggagaataactac
tcctacctgaaaatggacggcactaccccgatagcttcccgacagccgctcgtcgctcgg
tacaacgaggacaaatccatttttatcttcttgttgaccactaaagtcggaggtctggga
gtcaatctgactggagccaacagagtcatcatctatgacccagactggaaccccagtact
gacacacaggcacgggagcgagcgtggaggatcggtcagaagcagcaagtgaccatctac
agactgctgaccgcagggaccatcgaggagaaaatctaccacaggcaaatcttcaaacag
tttctgaccaatcgtgttctgaaggaccccaaacagagacgcttcttcaagtccaacgac
atctatgagctattcaccctgtctgaccctgatggagctcagggaacagagaccagcgcc
atatttgcaggtacaggctctgatgtcaaggcacctaagaaacacgatagactaaggcca
ccgcacatgctgaaccgtggcagacacgcacataaacactcctcagcaaaccagaacgaa
accggcgcagacaaccgacactcctcaacaaattttcctgcattaagggatggaaatacc
tccgtgtgcattaaaaactctccgggtaaaattaacatcccgacggacagtcaaagcacc
aatcacagcgttgtggacgtaaagccaaatatttcaacaaatacgcagcacacagaagaa
aagagcagagactgtgacgcagccgagccagcggggaacaactcaaccagctcacaccga
cacagacgcaaagactctgccctgacgagcccacagaaacacagggagaagaggaagcac
tgcgactcggccgactcggacaaacgcgcgcacaggaaacgcaaacactcccaaggtgct
cggttcgaaggccagcgcatctctcacttagtgaagaaaaggtccttcaacaaagcggag
aatgaagacaacgagacggaggacgagaagaaatccgacgattatgtcttggcaaagctc
ttcaagaaatccggtatccacagtgtgatgcagcatgacaccatcatggaggcgtccaac
ccggactatgttcttgtggaggctgaagccaaccgagtggccaaagatgccctgaaggcc
ctgaaggtttctcgccagcagtgcagactgccttataatagaccccctcctccgcccgca
aggaaacggtttggacaaaagaagaattcgctcctggttgcaccctcagttcaatctgtc
cctactccgagcaaatgcaaggatgctgctattgttcagaagtctttgtcaaagaagcct
ggcgcaggggctcactttagcggggagggggccgaaggtaactcaaactccaccccgctc
tcttcctcctccctgctggtcaagatgaaagcccgcaaccacctcagcatgccctcgggc
caaagggaagaagcgggggaagacgaggacggctccggagctccagtgaggggctctccc
ccgccaccgcccaccgagcacgacgagctgctggtggacgtgcgcaacttcatcgccttc
caggcgaccgtggatggacaggccaccacccaggaagtgctgggctatttcaaaccaaga
ctaaccaagcagcaggcgcccgtcttcagagagctgctcaggagcgtctgcgacttccac
aggacgtctggtcaggacggcatctggaaactgaaggagcactttcgctga
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integrated database retrieval system
