KEGG   Scophthalmus maximus (turbot): 118284011
Entry
118284011         CDS       T09850                                 
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04141  Protein processing in endoplasmic reticulum
smau04210  Apoptosis
smau04217  Necroptosis
smau04218  Cellular senescence
smau04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118284011 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118284011 (capn1)
   04217 Necroptosis
    118284011 (capn1)
   04218 Cellular senescence
    118284011 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    118284011 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:smau01002]
    118284011 (capn1)
Enzymes [BR:smau01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     118284011 (capn1)
Peptidases and inhibitors [BR:smau01002]
 Cysteine peptidases
  Family C2: calpain family
   118284011 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 118284011
NCBI-ProteinID: XP_035462443
UniProt: A0A8D3DEI5
LinkDB
Position
12:6944657..6963482
AA seq 706 aa
MVEEPIYATGMAARLRSQWDRDEGLGQNHNAVKFLGQDYESLRAKHQGSGRLFEDSMFAC
AASSLGFNELGPRSSKTSGVRWLRPTEFCKRPEFIVDGATRTDICQGALGDCWLLAAIGS
LTLNTELLHRVVPHGQSFQQGYAGIFHFQFWQFGEWLEVVIDDRLPVKDGKLLFVHSAEG
TEFWSALLEKAYAKLNGCYEALSGGSTCEGFEDFTGGVTEMFELRKAPSDLHSIIKRAID
RGSLLGCSIDITSTRDMEAVTFKKLVKGHAYSVTAVDEVVYRGNMTKLVRIRNPWGEVEW
TGAWSDDSREWDSVDRSVRARLQNRSEDGEFWMSFSDFLREFTRLEICNLTADALENSQL
KKWSSSLYQGEWRRGSTAGGCRNFPATFWLNPQFKIALQHPDAPGQSECSFLVALMQKDR
RKKRQEGKDMETIGFALYEVPKEFVGRSGVHLKKEFFLTHASSARSELFINLREVSSRLR
LPAGEYIIVPSTFEAHKEGDFVLRVFSEKPADSEELDDEVEAKLPTETQLDESQIDAGFK
NLFRQLAGPDMEISVTELQTILNRIISKHKDLKTDGFTKEACRSMINLMDTDGSGKLGLS
EFHVLWEKIKRYLTVFRQFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILRYTEDDM
AIDFDNFVTCLVRLETMFQTFKTLDTDADGQISLTFFQWITLTMFA
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggtggaggagcccatttacgccacgggcatggccgccaggctgcggagccagtgggat
cgcgacgagggcctggggcagaaccacaacgccgtgaagttcctggggcaggattatgag
tctctgagggccaagcaccagggcagcgggcggctgtttgaggacagcatgttcgcgtgt
gccgcgtcctccctgggattcaatgagctcgggccgagatcctccaagacctccggagtc
cgctggctgagacccacggaattctgcaagcgtcccgagttcatcgtcgacggagccact
cgcacggacatctgccagggagctctgggggactgctggctgctggcggccatcggctcg
ctgaccctaaacaccgagctcctccacagggtggtccctcacggtcagagcttccagcag
ggatacgccggcatctttcacttccagttctggcagttcggcgagtggctggaggtggtg
atcgacgaccggctgccggtgaaggacgggaagctgctgtttgtccactcggcggagggc
accgagttctggagcgcgctgctggaaaaggcctacgccaaactaaacggctgctacgaa
gcgctgtcgggcggcagcacgtgcgagggcttcgaggacttcaccggcggcgtgacggag
atgttcgagctgcggaaagccccctccgacctccacagcatcatcaagcgggccatagac
cgggggtcgctgctgggctgctccattgacatcaccagcacccgagacatggaggccgtc
acgttcaagaagctggtgaaaggacacgcctactccgtgaccgccgtggacgaggtggtg
tacagaggaaacatgaccaagctggtgcgcatcaggaacccctggggggaggtggagtgg
acgggcgcgtggagcgacgactccagagagtgggacagtgtggatcgctccgtcagggcc
cggctacagaaccgcagcgaggacggggaattctggatgtcgttcagcgacttcctgcgc
gagttcacccgcctggagatctgcaacctgacggccgacgcgctggagaacagccagctg
aagaagtggagctcctcgctctaccagggcgagtggaggaggggcagcaccgccggcggc
tgccgcaacttcccagcgaccttctggctcaacccgcagttcaagatcgcgctgcagcac
ccggacgcgcccggccaatcggagtgcagcttcctggtcgccctcatgcagaaggaccgc
aggaagaagcggcaggagggcaaggacatggagaccatcgggttcgccctctacgaggtt
ccgaaggagtttgtgggcaggtccggcgtccacctgaagaaggagttcttcctcacgcac
gcctccagcgcccgctcggagctcttcatcaacctgagggaggtcagctcgcggctgcgg
ctgccggcgggcgagtacatcatcgtgccctccaccttcgaggcgcacaaggagggcgac
ttcgtcctcagggtgttctccgagaagccggccgactccgaggagcttgatgacgaggtc
gaggcgaagcttccgactgagactcagctggacgagagccagatcgacgcgggcttcaag
aatctcttcaggcagctggcggggccggacatggagatcagtgtcacggagctgcagaca
attctgaacaggatcatcagcaaacacaaagacctgaagacggacggcttcacgaaggag
gcctgccgcagcatgataaacctcatggacacggacggcagtggaaagctgggcctgagc
gagttccatgtcctctgggaaaagattaagcgatacctgaccgtattccggcagtttgac
ttggacaaatcgggcaccatgagctcctacgagatgaggatggcccttgaatccgcaggt
ttcaagctgaccaaccacctgttccagctgatcatcctgcgctacacggaggacgacatg
gccatcgactttgacaactttgtcacctgcctggtccgactggagaccatgttccaaacc
ttcaagactctggacacggacgccgacggtcaaatatccctcaccttcttccagtggatc
accctgaccatgtttgcctag

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