Scophthalmus maximus (turbot): 118284316
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Entry
118284316 CDS
T09850
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X4
KO
K04378
serum response factor
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118284316 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118284316 (srfb)
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
118284316 (srfb)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
118284316
NCBI-ProteinID:
XP_035463050
EnsemblRapid:
ENSSMAG00025014553
LinkDB
All DBs
Position
10:complement(10002376..10023821)
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AA seq
586 aa
AA seq
DB search
MLPSQVGSAPSGNGSASGRATTGHGSGVVGSGVRPVLVRAGQALPGVGGSAVGRQGERGA
IGMLGANGPGGPRGARPGNGAGVTSLQTAVQGNMLGLLGARFDPDRESAPLCSGSDNDSD
SADDDDPVGSLGDSRRGVKRERGEMEGAVTGQEVGVPTGGYGMVPGGVAGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMGDTKDTL
KPAFTVASLPGSTSQSTVPTTSTTMQVSSGPSFPVTNYLAPVSAGSNIGGNSTVLKAAGA
STGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQALAAAQQPQQGQQAV
FRFPAAVSLAGAGIPQQLQAIQVHNTQSSDNSSEISHTSTNSTATVSLPATIVTSSIPTS
VAGHMMYPSSHTVMYASTPGLTDGGLAVLNAFSQGTSAMQVSHAQAQDAGGVPQVFLTAP
PGTVQIPVSAVQLHPMVIGQQSSSSSSNLTELQVVNLDAAQSSKSD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggtcggatcggcaccatctggaaacgggtcggcttcgggcagggca
accacgggacacggttcgggggtcgtcgggagcggggtccgtcccgtgttggtccgagca
gggcaagctctaccgggggtcggcgggagcgccgtcgggcgacagggggaaagaggcgcc
atcgggatgctgggggctaatggtccagggggtcccaggggcgcacggccggggaacggg
gccggggtgacctctctacagaccgccgtccaggggaacatgctggggttgctcggagct
cgcttcgacccggacagggaaagcgcgccgctgtgcagcggctcggacaacgactcggac
tccgcggacgacgacgaccccgtgggttcactcggggacagccgcagaggggtgaagcgg
gagcgaggggagatggagggcgccgtgacgggacaggaggtgggagtaccgaccggaggc
tacggcatggtgcccggcggggtcgcgggggccaagcccggcaagaagacacgtggacgc
gtaaagatcaagatggaatttattgacaacaagttgagacgctacacgacgttcagcaag
aggaagacggggatcatgaagaaggcctatgagctctccaccctgacgggaacccaggtt
ctgttgcttgtggccagtgaaacgggtcacgtttacacttttgccacacgcaaactccag
ccaatgatcaccagtgaaacgggcaaagccctgatccaaacatgcctcaactcgccggac
tcgccaccgcgatccgacccctccacggaccagcgcatgagtgccaccggcttcgaggag
acggacctcacctaccaggtgtctgagtcggagagcatgggcgacacaaaggacacactg
aagccggcattcacggtagccagcctcccaggctctaccagccagtccactgtacccacc
acctccaccaccatgcaggtgagcagcggaccttcgtttcccgtcaccaactacctggca
cccgtctcggccggcagcaatatcggcggcaacagtaccgtcctcaaggccgccggcgcc
tccacgggggtcatgcagctgcccagtggcttcaccttcatgcccgcaggcacacctctc
ccccccggcacccccaccattcctctgagccagctgcagcagcactccctggccctccag
gggcagcatggtcaggccctggccgccgcccagcagccccagcagggacagcaggctgtc
ttccgcttccctgctgctgtctccctcgcaggagcaggcattccccagcagcttcaggcg
atccaggtccacaacacccagtccagcgacaacagctccgagatctcccacacctccaca
aactccaccgcaacggtgagtctcccagcaaccatcgtcacctcgtcaatccccacgtcc
gtggcgggtcacatgatgtacccgagctcccacacggtaatgtacgcctccacgccaggg
ctgaccgacggggggctagctgtgctcaacgccttctcccagggcacctcggccatgcag
gtgtcccacgcacaggctcaggacgcaggtggtgtccctcaggtgttcctcacagcacct
cccggcacggtgcagatccccgtctcagcggtgcagctacacccaatggtgattggtcag
cagtcgagcagcagcagcagtaacttgacggagctccaggtggtgaacctggacgcagca
cagagctcgaagagcgactga
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integrated database retrieval system
