Scophthalmus maximus (turbot): 118284643
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Entry
118284643 CDS
T09850
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118284643 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Cadherin related
118284643 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
EGF
hEGF
Cadherin_pro
He_PIG
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
118284643
NCBI-ProteinID:
XP_035463406
LinkDB
All DBs
Position
10:20508393..20615685
Genome browser
AA seq
2941 aa
AA seq
DB search
MTGAVNGPVPPHLLLLLLLLLLLLVSPVRLSARPGHPARCFGQIAENSPAGTPVDGVTLP
LETGGCPGADFGASLLGDYASDFKLVHRRGHRDHRGGHLGLVSTKALDREFIAMYELRVQ
LPPPCPGTPTAIQVEVSDRNDNIPRFTGGNVTVDVDELTPLGAEVARFDAKDSDAERNGR
VTFYASPESHLLHVVPLSGQVRLVGSLRGHRRVTLRLFVRDGGDVTLIGEPVFLRVDVRR
HGQRRRPRALSEELTYTVTVPDHVRVGDLVFTVPDQRFEQRWFEVMSEAHSPVQIERDSG
RLYLARDLWEPADVTVKIQNRRGDEWYLCRLTLSMPSQANLRWAMFPSPYLAAVGPDATP
GSVVYRLSARQRDGTQGQAQFLLLDSGDECFELDRRSGEIRTTGRPLTPSKEYLLRVQAA
DEHGRKGASATVAVLAGYRPPQFTNATYSLNVAENTPVGRAVAVVQAVSFQRKSLSYMLL
VNPGNLFSINQESGALGLTRGVDHESGHNLHTLQARASEPDTGLSSVAEVVVQITDENDC
TPEFLHAIYTRDNVPESVAPGTSLLQVLARDCDSGVNSELSYFVHGGGDFDITSGGVVSP
ACRLDYERPNHAYEFVVVAVDAGSPPRTGTASVRVRVSNSNDEAPVFSQSVYRTFLSEDA
GPDTLVAIVHANDPDGDGVSYAITGGNEDSNFLLDNQKGIIKLRRSPPPRLRGPQYVLNI
TATDDNASGGPHPLSSSTQVIVGINDINNNKPVFQECQNYSLNAAVLENQPPGTLVLRVQ
AHDADMGVNGEVRYGIMHRDGVSSGFDIDADTGVITTTVSFDRERQREFTLSVTATDQAE
EPLIGICQITVLVADQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNAAITY
SLSNQRPAYLHINPSTGWIYVNHPISQTSRISRQIVASDGGNRSSSVELTVIITNVHNQP
PHWEQTEYWVTVPENTVRDAQIVTVKATSPLGDPRVTYNLEEGQVPETNMPVRFYIKPKR
ADGSASILVAENLDYEATRFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTY
EATVPEGAEVGASVAQVSATDLDSGQHGMVHYVILRDESGDSQLFSIDSRSGVIATRASF
DREQKASYLIEVQSQDGSESARPGQQGQPNTDTAYVRIFVTDVNDNAPAFARPVYEVSVA
EDEEVGFVLITVTANDEDEGANAKLRYQITSGNAMGTFDVEPEVGTIYVAQPLDYETERR
YELRLVASDGKWENETLVVVHVVNRNDEAPVFGQTEYHAAVTEELTQLPVFILEVSATDP
DQEADQTAVRYSLHGQGAGGEFTIDERTGRIYAQRRLDREERPAWRFLVLATDEGGAGLT
GFADVLLEVQDVNDNAPFFPCPALQVDGCFVGQVPENSAADTSVMEMRAMDLDDPNEGKN
AMLTYSILKNVRNEINLNLFSINATTGTIYTVLRSLDREAEDRYLVVVEARDGGGLAGTG
TATIMVSDVNDHPPIFTQRVYTAQVTEDLEVNSEVLVVSATDGDEGENAVVTFSIVGGDD
DRKFLVETDKVNRRGVIKLKKKVDFEKPRERTFNLTLKAEDADFFSLAFCLVQVEDYNDH
APVFFPQFYESPAMSEDVPVGTIITQVTATDLDSGQNGRFSYRIFKESDPYGQFLVDQSG
WVVVADSLDREKISQHRIMVLATDAGSPPLTGTAIVMVTVLDVNDNGPEFEVPYEPVVWE
NMAAPQAVRMNATSFLLHATDRDTSTNGAPFSIRLLMLTSDATNFNLTDFRNGSAAITAL
RTFDRERQKEYRLPILMIDSGSPPMSSTGTLTVVIGDRNDHPHSPGHTDFIVYSFEGILP
TTVLGQVPSPDLDDWSEKSYRFEGKPSRLFSLNQSSGQLSVREATPPGSYRLQVRVSDRT
WPDVTSTVRVDVAELQQEALRNAASVRLSNLTVEEFFGSIRGEESPFSRLGRALAELVQT
SAEKVQIFSVGDAGRRGEKELNVWFAARGSPYYKAEKLHGYVAANKARLEATLGVSISQV
GVDNCPHTDCSLSGGCNSRVSFSQAPAALSSGNTSLVSLQATSTAQCGCRGREAVHLPCS
AYPTNPCLNGGTCQDGALGYRCQCPPMFDGPECQQTKHSFGGQGYAWFPPIMPCFQSHIS
LEFLAESANGLLLYNGPVGPAHSEEQEDFIAIELRNGVPALSINHGSGTLTLQLPPTSTA
TDRHWHRLDVISDGKAVQLILDQCGGVAVNELEGVGGDAQEVDESGCRAAGETPGNQRYL
NVFQPLQLGGLKETSPHRRYRSFTGCIRNLVVDSQVYDLASPGESVDSAPGCRLTDGVCV
TAAGPSCGVHASCLADWGSFSCECRPGYTGHKCDGVVPEFSFDSGSVVRYQLRGGGSSRR
TNIQLLLRTRAASGTLLSVTSREANEYMVLEITDGHLSVRADLGAGAGALQLPGQRVDIG
QWVLVSLSRHDNLFALRLEQGGGSREVQARLGSRRELVVHPASVTVGNGPNAGDDADFQG
CLRDVRFNGQVLPLDGRSRDLVSVLERRGVTPGCSSDACGGRPCRSPLLCIDLWRKHQCR
CPAGQVTVTEESGQQRCEPSPCGVSSCRNGGTCQPLSPDSYRCRCQEGFRGQRCELGQVK
GHRLAALSPSSILAISMCLLVFFAVLVAVTVWNQKGSRNKFRKRGVYHIPAEHASWEDIR
ENILNYNEEGGGEQDQNGYDITELKRPLCSSLSQSSSCTTAPLIKSSPGSQEEVHPSGSS
CSSGAPYLSIPHHNHHLHHQQQRAAAGYTGDATYANYAAHVGGDMEASEAGSYAARPGSR
SRVDFKSYVARIIWEADNDGEALPPDAYHVWCVEGEGSSAGSLSSLGSAASRANVDAGRG
GNEEEEDEDDGGFVCDRLSRWGPKFGALSEMYDRPRLGLSYQDAMIYIQRSHSHDPLPQH
H
NT seq
8826 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagctgtgaacggaccggtgcccccgcacctcctcctcctcctcctcctcctc
ctcctgctgctcgtctcaccggtgcgtctttccgcgcggcccgggcatccagcgcgctgc
ttcggccaaatagcggagaactctccggccgggacgccggtggacggggtgacgctgcct
ctggaaaccggcggctgccccggtgcggacttcggtgccagcctgctgggggattacgcg
tcggattttaagctcgttcaccgccgcggacaccgggaccaccgggggggacatctgggt
ctggtctccaccaaagcgctggaccgggagtttatagcgatgtacgagctgcgggtgcag
ctgccgccgccgtgtccggggacaccgaccgccattcaggtggaggtgtctgacaggaac
gacaacatcccccggttcaccggcgggaacgtgacggttgacgtggacgagctgacgccg
ctcggtgccgaggtggcccgctttgacgcgaaggacagcgacgcggagcggaacggacgc
gtcaccttttacgcgtcgccggagtctcacctgctgcacgtggttcccctgagcggccag
gtgaggctggtcgggtccctccgggggcaccgccgggtgaccctgcggctcttcgtgagg
gacggcggggacgtgacgctgatcggtgagccggtgttcctgcgcgtcgacgtccggcgc
cacgggcagcggcgaaggccccgcgctctgtccgaggagctgacctacacggtgaccgtc
ccggaccacgtccgagtcggggacctggtgttcacggtgccggaccagaggttcgagcag
cggtggttcgaggtgatgtcggaggcgcactcgccggtccagatcgagcgggactcaggg
cgcctgtacctggcgcgcgacctgtgggagcccgccgacgtgacggtgaagatccagaac
cgccgaggtgacgagtggtacctgtgcaggctgacgctgagcatgcccagtcaggccaac
ctgcggtgggccatgttcccctcgccctacctggccgccgtgggtcccgacgccacgccg
ggctcagtggtgtaccgcctgtcggcacggcaacgggacgggacgcagggacaggcgcag
ttcctcctactggacagtggtgacgagtgcttcgagttggaccggcgttccggcgagatc
cgcaccacgggacgacctctgacccccagcaaggagtacctgctgcgggtgcaggcggcc
gacgaacacggacgcaagggcgcctcggccaccgtggccgtcctggccggctaccggccg
ccgcagttcaccaacgccacctacagcctgaacgtggcggagaacacgcccgtgggtcga
gccgttgccgtggtgcaggccgtgtccttccagaggaagagtctatcctacatgctgctg
gtgaatcccgggaatctgttcagcatcaaccaggagagcggcgcgctcggcctcacgcgc
ggcgtggaccacgagagcggacacaacctccacacgttgcaggcccgcgcctccgaaccc
gacacgggcctcagcagcgtggcagaggttgtcgtgcaaataacggacgagaacgactgc
acgcccgagttcctccacgcgatctacaccagagacaacgtacctgagagtgtcgcacct
ggaacctccctgctgcaagttctggcccgcgactgtgactccggcgtgaactccgagctc
tcctacttcgtccacggcggcggcgactttgacatcacgtcgggaggcgtggtcagcccc
gcctgccgcctggactacgagcggcccaatcacgcctacgagttcgtggtggtggccgtg
gacgcgggctcgccgccccgcacgggcaccgcctccgtccgcgtccgggtgtccaacagc
aacgacgaggcgcccgtcttctcgcagagcgtttacagaaccttcctcagcgaggacgca
ggtcccgacacactggtcgccatcgtccacgccaacgaccccgacggagacggcgtctcc
tacgccatcaccggcggcaacgaggacagcaacttcctgctggacaaccagaaaggcatc
atcaagctgcggcggagtcctcctcccaggctgcgggggcctcagtacgtcctcaacatc
accgccacggacgacaacgcgtccggcggaccgcacccgctcagcagctccacccaggtc
atcgtgggaatcaacgacatcaacaacaacaagccggttttccaggagtgtcagaactac
agtctgaacgctgccgtcctggagaaccagcccccggggacgttggtgctgcgcgtccag
gcccacgacgcggacatgggggtcaacggagaggtcagatatggcatcatgcaccgagac
ggagtctcgtccggattcgacatcgatgccgacactggcgtgatcaccacgacagtgagc
ttcgatcgcgagcgccagagggagttcacgctgtcggtgacagccacagatcaggccgag
gagccgctcatcgggatctgtcagatcaccgtgctcgtcgccgaccagaacgacaacgac
cccaaattcgaaaacagccgctaccagtatttcctgcgagaggacactccggtcgggact
agtttcctgcgagcagcggcgcacgacgacgaccaggggagcaacgcggccatcacctac
tcgctgtccaatcagaggccagcgtacctgcacatcaaccccagcactgggtggatttac
gtcaaccaccccatctcacagacgtccaggatcagccggcagatcgtggcctcggacggg
gggaaccgcagcagctccgtggagctgaccgtcatcatcaccaacgtgcacaaccagccg
ccgcactgggagcagaccgagtactgggtcaccgtgccggagaacaccgtccgagacgcc
cagatcgtgaccgtcaaggcgacgtcgccgctcggtgacccccgggtgacctacaacctg
gaggagggtcaggtgccggagaccaacatgccggtgcggttctacatcaagcccaagcgg
gcggacggctcggcgtccatcctggtggccgagaacctcgactacgaggcgacgcgcttc
ttcacgctccgcgtgcgggtgcagaacgtcgccgccgtgccgctcgcctccttcaccacc
gtctacgtcaacgtgacggacgtgaacgacaacgttcctttcttcctgtcgtccacgtac
gaggccacggtgcccgagggagccgaggtcggcgcgtcggtggctcaggtgtcggccaca
gatctggactctggtcagcacgggatggtccactacgtgatcctccgggacgagagcggc
gactcgcagctcttcagcatcgactcgcgcagcggcgtcatcgccacccgcgcctcgttc
gaccgcgagcagaaagcttcgtacctgatcgaggtgcagtcgcaggacggctccgagtcg
gcgcggccgggccaacagggacagcccaacaccgacacggcgtacgtcaggatcttcgtc
accgacgtcaacgacaacgcgccggcgttcgcccggccggtgtacgaggtgagcgtggcg
gaggacgaggaggtcggcttcgtcctcatcaccgtcaccgccaacgacgaggatgaaggt
gccaacgccaagctgcgttatcagatcacttcgggcaacgccatgggcaccttcgacgtg
gagcccgaggtgggcaccatctacgtggcccagccgctggactacgagacggagcggcgc
tacgagctgcggctcgtcgcctccgacgggaagtgggagaacgagacgctggtggtggtg
catgtggtcaaccgcaacgacgaggcgcccgtcttcggccagaccgagtaccatgccgcc
gtgacggaggagctcacccagctgccggttttcatcctggaggtgtccgccacagatcca
gaccaagaagccgaccaaaccgcagttcgttactctctccatggccaaggcgccggtggt
gaattcacaatcgacgagcgcacgggaagaatctatgcccaacggcgtctggaccgcgag
gaacgtccggcctggagattcctcgtcctcgccacagacgagggaggcgctgggctcaca
ggattcgccgacgtgctgttggaagtccaagatgtcaacgacaacgcgcccttcttcccg
tgtcccgcactgcaagtagatggatgttttgtcgggcaagtgcccgagaactccgccgcc
gacacatccgtcatggagatgcgtgccatggacctggacgaccccaacgagggcaagaac
gctatgctgacttacagcatcctcaagaacgtccgcaatgagatcaatctcaacctgttc
tccatcaacgccaccacggggaccatctacacggtgctgcgttccctggaccgagaggcg
gaggaccggtatctggtggtggtggaggccagggatggcggggggttagcggggacaggg
acagctaccatcatggtttcagatgtcaacgatcacccacctatcttcactcagagggtc
tacaccgctcaggtgacggaggacctggaggtgaacagcgaggttctcgtagtttctgcc
acggacggagatgagggcgaaaacgctgttgtaaccttcagcatcgttggaggtgacgac
gacaggaagttcttggtggagacggacaaagtcaacagacgtggtgtgataaaactgaag
aagaaggtcgactttgagaaaccccgtgaaaggacgtttaatctgaccctgaaggccgag
gacgcggatttcttcagtctggccttctgtctcgttcaggtggaagactacaacgaccac
gcccccgtcttctttccacagttctacgagtcgccggccatgtccgaagacgtacctgtg
gggactattatcactcaggttaccgccactgacctagactcaggccaaaatggacgtttc
tcttacagaattttcaaggagtctgacccttacggccagttcctggtggaccagtccggt
tgggtggtcgtggccgattcgctggacagggagaaaatctcacagcacaggatcatggtc
ctcgccacagatgctgggagtccgcccttgaccggcactgccatcgtgatggtgactgta
ctcgatgtcaacgacaatgggccggagttcgaggttccctatgaacctgttgtctgggag
aacatggcggcaccgcaggcggtgcgaatgaacgcaacttccttcctcctgcacgccacc
gaccgcgacacctccaccaacggcgcgccgttctccatacggctcctcatgctcacctcg
gacgccaccaacttcaatttgaccgactttcggaacggcagcgctgccatcacggccctg
cggaccttcgatcgtgagcggcagaaagagtaccgcctcccgattctcatgattgacagc
ggctctcccccaatgagctccaccggcacgctgacagtcgtcattggggacaggaacgac
cacccccactctccgggacacacggacttcatcgtgtacagttttgagggtatcctcccg
acgacggtgctcggacaggttccgtcccccgacctcgacgactggagtgagaagtcgtac
cggttcgagggcaaaccatccaggttgtttagtctgaaccagagctcgggtcagctgagc
gtcagggaggccacgcctccgggctcgtaccgcctgcaggtgcgcgtgtccgaccgcacc
tggcccgacgtgacctccacggtccgggtcgacgtcgcagagctgcagcaggaggccctg
cggaacgccgcctccgtccgcctgtccaacctgacagtggaggagttcttcggcagcatc
cgaggcgaggagagtcctttttcccgtctgggtcgagcgttggcggaactcgtgcagacg
tcagcggagaaggtgcagatcttctctgtgggcgacgccggccgacggggcgagaaggag
ctgaacgtctggtttgccgctcgcggctcgccgtactacaaggcggagaagctgcacggc
tacgtggcggcaaacaaagccaggctggaggccacgttgggcgtgtccatctcccaggtg
ggcgttgacaactgtccgcacacggactgcagtctgtccggaggctgcaacagccgggtc
tcattcagccaggccccggcggctctcagctccggtaacacctccctggtgtcactgcag
gccacgtccacggcacagtgcggctgccggggccgagaggccgtccacctgccctgctcc
gcttaccccaccaacccctgcctgaacgggggcacctgccaggacggtgcactgggatac
cggtgtcagtgtcctcccatgttcgacggccccgagtgccagcagaccaagcacagcttc
ggcggccaaggctacgcctggttccctcccatcatgccttgtttccagagccacatctct
ctggagttcctggccgagtcggccaatgggctgctcctctacaacggacctgtcggcccc
gcccactccgaggagcaggaggacttcatcgccatagagctgaggaacggggttccagct
ctgagcataaaccacggatcgggaacgctgacgctgcagctccctcccacgtccaccgcc
accgaccgccactggcatcggctcgacgtcatcagtgacgggaaggccgtccagctgatt
ctggaccagtgtgggggggtggcggtgaacgagctggagggcgtcggaggtgacgctcag
gaggtggacgagtctggctgcagagctgcaggagagacgcccggcaaccagaggtatctg
aacgtgttccagcctctccagttgggcgggttgaaggaaacgtcccctcacagacgttac
cgcagtttcaccggctgcatccgcaacctggtggtggacagtcaggtgtacgacctggcg
tctccgggtgagagtgtggacagcgccccgggctgcaggctcacagacggggtgtgtgtg
acggcggcgggcccctcctgcggcgtacacgcctcctgcctcgccgactggggctccttc
agctgcgagtgccgcccgggatacaccggacacaagtgtgacggcgtcgtcccagagttt
tccttcgactcgggcagcgtcgtgcgataccagctcagaggaggcggcagctcgcgtcgc
accaacatccagctgctcctgcggaccagagcagcctcgggcaccctgctctccgtgacg
tcccgggaagccaacgagtacatggtcctggagattacggacggtcacctctctgttcgc
gccgacctcggcgccggcgccggcgccctgcagctccccggtcagcgggtggacatcggg
cagtgggtgctggtcagcctcagccgccacgacaacctgtttgccctgcggctggagcag
ggcggggggtcgcgggaggtccaggcccggctggggagccggagggagctcgtggtccac
ccggcaagcgtgacggtcggcaacggaccaaacgccggagacgacgccgacttccagggc
tgcctgcgggacgtccgtttcaacggtcaggtcctccctctggacgggcggagccgggac
ctggtgtcggtgctggagaggcggggcgtcaccccgggctgctccagcgacgcctgcggc
ggccgaccctgccgcagcccgctgctctgcatcgacctgtggaggaaacaccagtgcagg
tgtcccgccggtcaggtgaccgtcaccgaggagtcgggtcagcagcgctgcgagccgtcg
ccctgcggagtctcttcctgccgcaacggcggcacctgccagccgctgtcgccggacagc
taccggtgccgctgtcaggaggggttcaggggtcagcgctgcgagctggggcaggtcaaa
ggtcaccggctggccgccctcagtcccagctccatcctggccatcagcatgtgtctgctc
gtcttcttcgcggtgctggtggcggtgacggtgtggaaccagaaaggcagtcgcaacaag
ttcaggaagcgcggcgtttaccacatccccgctgaacacgcgagctgggaggacatccga
gaaaatatcctgaactacaacgaggagggaggtggcgagcaggaccagaacgggtatgac
atcacggagctgaagcgcccactgtgctccagtctgtcccagtcctcgtcctgcaccacc
gccccgctcatcaagtcctcgcccggctcccaggaggaggttcacccgtccggctcctcc
tgcagctcaggcgccccctacctcagcatcccgcaccacaaccaccacctacaccaccag
cagcagcgcgccgctgccggctacaccggcgacgccacctacgccaactacgccgctcac
gtgggcggcgacatggaggcgagcgaggcgggcagctacgccgctcggccggggtcacgc
tcccgcgtggacttcaagagctacgtggcgcgaatcatctgggaggcggacaacgacggc
gaggcgctgccgccggatgcctaccatgtctggtgcgtggagggtgagggctcctcggcg
ggaagcctcagctcgctggggtcggccgcgtcgcgcgcaaacgtggacgcaggccgcggc
ggcaatgaggaggaggaagacgaggacgacggagggttcgtttgcgacaggctgtcgcga
tggggcccgaagttcggagctctgagcgagatgtacgaccggccgcgtctcggcctctcg
taccaggacgccatgatctacatacagaggagccacagtcacgacccgctgccccaacac
cactag
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