Scophthalmus maximus (turbot): 118284645
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Entry
118284645 CDS
T09850
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118284645
Membrane trafficking [BR:
smau04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118284645
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
118284645
NCBI-ProteinID:
XP_035463411
LinkDB
All DBs
Position
10:complement(20276265..20310557)
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AA seq
1524 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGPWRPLDEEGKTCCSTSSSSPSSSSTLAGRGAVDPVTDL
AVIAKGLGEEVPEGFTCIERTLGGHSAELSAGLINNPHLFLCYRRGRDKPPVLDLGVLYE
GKEQPKQSWYVIETTPYSRSASLCAGSAPTTHRVFLTYRRALDSQGLHTLGVTDIALLLP
GKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYEASLISRYPEDDLEAFPL
PESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYESFPRELLSE
RQSVRLGLLSVVDRRPITSRSLQAKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPL
EKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASFLKLLQNLGPENA
CTLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPMP
FVVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSDDKKPLSWRSLPRRHGKTLFNTLTNLHK
TLEKICTPGQEEATLEFLLTDYDQIYRRQKQLELEIQEVFLRFMSCLLRGYRSFLLPITQ
APSDTTTDCSSLFNLQGFLKSRDRTQQKFYLQLTRTQMFTQFIEECSFVSDRHACLEFFD
ECVQKVDVEKPEDVKLIDLDETHGGEHTVFIMPPEEPQEPDGSECPAPYSYETFPTLRPE
LFDQPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYAAVPDMWSKCLLGHCYGLWF
IYLPTFVRAESAKVRALHAAYDVLKHMENRKVVLPDEVCYRILMQLCGQYGQPVLAVRVL
LEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIRRRQK
SGSVGSRGEAMMDADQRLRPHSSLIRQSSWSGLSESSSHESLTGPLVKSNSLNSMKTSVD
KVRLCKKAAPRNTATDGDAVSCKPPLGLRDASSAAAMPPAPPSGGALVRRSQVCLSNFYR
ECTESADSDPDCGCQLAERDGRPVGVRDPAVDENYNNVSTPSRGGLAGKLQQLLTPTRHR
VSVRRAASVDDRRRGRGGGGAGAGAGGGGGIGGGVSEQRQSRKAQVAETLLKAKDRLVNA
TSESSLSVGSDLDLTDMPSPAFPLRRSWDANQEVAGLEVLMSSCSLCRSCNSLVYDEEIM
AGWTSDDSNLNSSCPFCGASFVPFLNAEVCDLGPVSSAERGNWNVEDEVESAARPPGDHE
AFLRHQCNGLSEDSSSETSSYSENSRTTKGSSGGGAPQVTVAYLSPLVLRKELESLLENE
GEAVLAQPQFLDSHCIIFWNLVWYFQRLGLPSNLLQLVRASPLVGHFTQSDSSAVRVRLL
WDTLAPDTDQWPPLYVLWRIHSGVPMRSHSWRRHNHPFTLAFLEEVLRWVGMNEVHKAVT
LFLDTLAKQPGSPQTQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSGTLGRDELR
RKRAQPPSPKAVDCRRSFHPPLEC
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagctggtggactactttgtggtggcaggtctggaccct
gcgggcccctggaggcctctggatgaggagggtaagacctgctgctccacctcctcctcg
tccccctcctcctcctcgaccttggcgggccggggggcggtggatccggtcacggacctg
gcggtgatcgccaaggggctcggggaggaagtgccggagggcttcacctgcatcgagagg
actctgggcggacactcggccgagctgagcgccggcctcatcaacaaccctcacctgttc
ctgtgctaccgcagaggacgggacaagccgcccgtcctggacctgggggttctgtacgag
gggaaggagcagccgaagcagagctggtacgtcatcgagacgacgccctacagccgctcc
gccagcctgtgcgctggcagcgcccccacaactcaccgggtcttcctgacgtaccgccgg
gctctggactcccaggggctccacacgctgggcgtcaccgacatcgccctgctgctgcct
ggcaagggggaggtggcgccgcacacattctgccgtgtcgacaagaacctcaatacgggc
atgtggggtccagccctgtacgtgtgctacaagcgagctgtggccaaagccaatgccttg
gtgtacgaggccagtctgatcagccgctacccggaggacgacctggaggcgtttcctctg
cctgagtcggtgcccgtcttctgcctgccgatgggcgtcaccgtggagagctggcccctg
aacaccaagtaccagctacctgtcttctccaccttcgttctcacgtcggcctgtggcgac
aaggtttacggagcggccatccagttctacgagtcgttcccccgggagctgctgtcggag
cggcagagcgtgcggctcggcctcctcagcgtggtcgaccgccggcccatcaccagtcgc
agcctgcaggcgaagaagagcatctgcgtcctgtcccactggcccttcttcaccgtcttc
cagaagttcctcaccttcatctacagatactccatctccggacctcacgtcctgccgctg
gagaaacacatctccagcttcatgcacaacgtcccgtttccttccccccagcggccgcgc
atccttgtccagctctctccatacgacaacttgctgctctgtcagccggtctcgtctccg
cttcccctcagcggcgcgagcttcctgaagctgctgcagaaccttggtccagaaaacgcc
tgcacgctgctgctcgccgtcctcaccgaacacaagctgctgctccattcactccggccc
gacgtcctcacctcggtcagcgaggcgctcgtctcgatgagtttcccgctgcgctggctc
tgtccctacatcccgctgtgtccgctgcagatggcggacgtgctgctggcgcctatgccc
tttgttgtcggcgtccactccagctacttcgacctgtacgacccccccaccgacgtggtg
tgtgttgacctggacaccaacaccatcttccagtcagatgataagaagccgctgtcatgg
cgatcgttgcccaggagacacggcaagacgctgttcaacaccctgaccaacctccacaag
accctggagaagatttgcactcctggccaggaggaggctacgctggagttcctgctgacc
gattacgatcagatctaccggcgtcagaagcagctggagctggagatccaggaagtgttt
ctgcgcttcatgagctgcctgctgcgaggataccgctccttcctgctgcccatcactcag
gctccgtccgacaccaccaccgactgcagttccctgttcaacctgcagggcttcctgaag
tcccgggatcggacgcagcagaagttttacctccagctgacgaggacccagatgttcact
cagttcatcgaggagtgctccttcgtcagcgaccgccacgcctgcctggagttcttcgac
gagtgcgtccagaaggtggacgtggagaagccagaggacgtgaagctgatcgacctggac
gagactcacggcggagagcacacggtcttcatcatgcctcccgaagagccgcaggagccg
gacgggtccgagtgtcctgccccctacagttacgaaaccttccccaccttgaggccggag
ctgttcgaccagccgcaggaccagctccgggtcccggccaaaggcagcgcccccagcagc
cccgcccctcgccgcacaaaacaggagatcaagctggcccagaagcgagcgcagaagtac
gccgccgtcccggacatgtggtccaagtgtctgctgggtcactgctatggcctctggttc
atctacctgcccaccttcgtgcgggcggagagcgccaaggtccgcgccctacacgcggcc
tacgacgtcctcaaacacatggagaaccgcaaggtggtgctgcccgacgaggtgtgttac
cggatcctgatgcagttgtgcggtcagtacggccagcccgtgctcgctgttcgagtcctg
ctggagatgaaaaaggcgggaatcacaccgaacaccatcacctacggatactacaacaag
gcggtgctggagagcaagtggccctcgaccaatcagggcgggcgtctccgctgggccaag
ctgaggaacgtcctgctggccgtcgcccagttccgacagccaatcagacggcgtcagaag
agcggctcggtggggtcacggggagaagcgatgatggacgctgaccagaggctccgcccc
cactcctctctgattcgtcagtccagttggagcggcctgtccgagagctccagtcacgag
tctctgacgggtccgttggtgaaaagcaacagtctgaacagcatgaaaacatccgtcgac
aaggtcagactctgtaagaaggccgcaccacggaacaccgcgaccgacggcgacgcagtc
tcctgtaaacctccactgggactcagagacgcttcctctgcagccgctatgcctccagcg
ccgcccagcggtggtgctctggtgcggcggagtcaggtgtgcctctccaacttctacaga
gagtgcacggagtcggccgactcggacccggactgcggctgccagctggcggagagagac
ggcaggcccgtgggagtgcgggacccggccgtcgatgagaactacaacaacgtctctacc
ccgagccgaggaggtctggcggggaaactccagcagctcctcaccccgaccagacaccga
gtgtcggtgcggcgagccgccagtgtggatgaccgccggcggggccgaggagggggcggg
gctggggccggtgcaggagggggaggagggattggagggggagtgtctgagcaaagacag
tccagaaaagctcaggtggctgaaactctcctgaaggccaaggacaggctggtcaacgcc
acctcagagagttcgttgtctgtaggaagtgacttagacttgacggacatgcccagtcca
gcgtttcctctgcgcaggtcctgggacgccaatcaggaggtggcggggctggaggtgttg
atgtccagctgctctctttgtcgcagctgtaactcgttggtctatgacgaggagatcatg
gcgggctggacgtcggacgactcaaacctgaattcatcctgcccgttctgcggcgcctcc
ttcgtccccttcctgaacgctgaggtctgtgacctggggcctgtcagcagcgcggagcgc
ggcaactggaacgtggaggacgaggtggagagcgcggcgaggccccctggtgaccacgag
gccttcctgcggcaccagtgtaatggtctgagcgaagactccagctctgagaccagcagc
tactcggagaacagcagaacgaccaagggctcgtcagggggcggggctccccaggtgacg
gtggcgtacctgagccctctggtcctgaggaaggagctggagagtctgctggagaacgag
ggcgaggcggtgctggctcagccccagttcctggacagtcactgcatcatcttctggaac
ctggtctggtacttccagcgcctcggtctgcccagtaacctgctgcagctggtccgagcc
tcgccactggtcggccacttcacacagtcggatagctcagcggtgagggtgaggctcctg
tgggacaccctggcccccgacacagaccagtggccccccctctacgtcctctggaggatt
cacagtggcgtcccgatgaggagtcacagttggcggaggcacaaccacccgttcactctc
gccttcctggaggaggtgctgcgctgggtcggcatgaatgaggtgcacaaggccgtcacg
ctcttcctggacacgctggccaaacagccggggtcgccgcagacacagaggagtttgtac
agagagttcctcttcctcacactggcagcaatgggcaaagaccacgtggcggcgttcgat
aagaagtacaaggcggcgtactctcgactcagcggcactctgggtcgcgacgagctccgg
agaaagcgagctcaacctcccagccccaaagccgtcgactgccgacgcagcttccacccg
cccctcgaatgctga
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