Scophthalmus maximus (turbot): 118284654
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Entry
118284654 CDS
T09850
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118284654 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118284654 (cnot10)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118284654 (cnot10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_12
TPR_16
TPR_8
TPR_7
ANAPC3
ARM_TT21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
118284654
NCBI-ProteinID:
XP_035463440
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All DBs
Position
10:20820393..20833360
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AA seq
743 aa
AA seq
DB search
MAENAEQDEAKHDGSMSPGVTDQEKEMATRAYEAFSAGKYDESLKHLEALQELNKEDYKI
AMNKAVVEFYKSDQSTTGTLKQTLMTIKNQVHTSAEDVDGLDDVENSLLYYNQAIIHYHM
RQYSEAIAIGEKLYQFLEPFERFAQAVCFLLVDLYLLTFQPEKALHLLAVLDKLSVQGGS
SKNGKGEVRYLADRTNNSSNKDGANQKAEFMAMIEAAKSKMHQYKVRAYIQMKSSKACKR
EIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPIKTGECVRCMFWN
NLGCIHFAMGKHNLGIFYFKKALQENDHTCAQLGDGNNGQAKKFTGIPMCALLANKRYEL
LHNCGIQLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCIAAIKGGSEQESKGLPCK
KGIVQSIVGQGYHRKIVLASQSTQNTIYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQ
PDAKTENGSKSFSQSASTESGSENSDACSGKGPEADKFLSAAPSSPLRKQEVENLRCSIL
ACSAYVALALGDNLMALNHAEKLLHQTKVSGSLKFLGHLYAAEALISLDRISDAIAHLNP
ENVSDVSMGVLSSEQDQGSEKGDEPVESSGKQTPLCYPSSVTSARAMMLFNLGSAYCLRS
EYDKARKCLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPTAVQRVS
PDSRKKQAPSFQPPSSFTQVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacgcagaacaagacgaggcgaaacacgacggctcaatgtccccaggagtg
acggaccaagagaaagaaatggcgaccagagcatatgaagctttttcggccggcaagtac
gacgagtctctcaaacacctcgaggcgctgcaggagctcaacaaagaagactacaagatc
gccatgaacaaagccgttgttgagttttataaaagcgaccagtcgacaacagggactctg
aagcagacactaatgacgataaagaaccaggtccacacatcggcggaagacgtcgacgga
ttggacgacgtcgaaaacagtttgctttactataatcaagccatcatccactatcacatg
cgacagtactctgaggccattgccatcggagagaagctctaccaatttctggaaccgttt
gagaggtttgctcaggccgtgtgcttcctgctggtggacctgtacctgctcaccttccag
ccggagaaggccctccacctgctggccgtgctggacaaactctctgtgcaaggcggcagc
agcaagaatggcaaaggagaggtacggtacctcgctgacagaacgaacaacagttcaaac
aaagacggagccaaccagaaagcagaattcatggccatgatagaggcggccaaatcaaag
atgcaccagtacaaagtcagagcctacattcagatgaagtcttccaaggcctgtaaaagg
gagatcaagtcggtgatgaacacagcggggaactctgcgccctcactcttcctcaagagt
aactttgagtacctgcgaggaaactaccgcaaagcagtgaagctgctgaacagctccaac
atcgcggaacatcccggccccatcaagacaggtgaatgtgttcggtgtatgttctggaac
aatctgggctgcattcactttgcgatggggaaacacaacctgggcattttctacttcaag
aaggcactgcaagagaacgaccacacctgcgcacagctgggagacggcaacaacggccaa
gctaagaagttcacggggattccgatgtgcgctctacttgccaacaagcgctacgagctg
ctccacaactgtggcatccagctgctgcacatcggccggcctctggcggcgttcgagtgt
ctgatggaggcggtgcaggtttaccattccaaccctcggctgtggctgcggctcgcagaa
tgctgcatcgccgccatcaaagggggctcggagcaggagagtaaaggtttaccttgtaaa
aaaggaatcgttcagtctatcgtcgggcagggttaccaccgcaagatcgtgctggcgtca
cagtcgacccaaaataccatctacagtgagggccagtcggcagcgatcccagtggccagt
atggagtttgcagccatctgcctgaggaacgcgttgctgctgctgcctgaacaccagcag
ccggacgccaagacagagaacggctccaagagcttcagtcagtcggcgagcacagagagt
ggcagcgagaacagtgacgcctgcagtgggaaaggtccggaggctgataagttcttgtct
gcagctccatcgtctcctctcagaaaacaggaggtagaaaatctcaggtgctccatcctg
gcctgcagcgcctacgtggcactggcattgggagacaacctgatggcactaaaccacgct
gagaagctgctccatcaaactaaggtgtctggatctcttaagttcctgggtcatctctac
gctgctgaagccctcatctcattggacaggatctccgacgccatcgctcacctcaaccca
gagaatgtcagcgacgtgtcgatgggcgtgctgagcagcgaacaagaccaagggtctgag
aaaggagatgagcctgtcgagtcatcagggaagcagactcccctgtgttaccccagcagt
gtgacgtcagcacgggccatgatgctcttcaacctgggcagtgcctactgcctgaggagc
gagtacgacaaggcccgcaagtgcctgcatcaggctgcatctatggtgaacaccaaggag
attccacctgaagcgatccttctgggagtctacctggagctacagaacggaaacacccaa
ctggctttgcagatcatcaagaggaaccagctgctgcccacggcggtgcagagggtctcg
ccagactcgcgcaagaaacaggctccgtccttccaaccgccatcatccttcacacaggtt
caacgcaaatga
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