Scophthalmus maximus (turbot): 118284655
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Entry
118284655 CDS
T09850
Symbol
zgc:113232
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
Organism
smau
Scophthalmus maximus (turbot)
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118284655
NCBI-ProteinID:
XP_035463444
EnsemblRapid:
ENSSMAG00025011108
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Position
10:complement(20713986..20729902)
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AA seq
654 aa
AA seq
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MGASSDTASLVSGLVVFTLCVVVSRCQDEFSGHHSAEDHTYEGSLVDHYDVVASPPPEYP
PEPTRRSHEEGDHDPHGRSRVTMITEDAFPYATTTESHYAKEDTETMQVPYEFPAAGPDT
DSSGEEGPTDCDCQPGEPGFAGFAGPKGSRGLQGKSGEPGTQGREGYKGTKGVRGRGGDA
GPVGDVGPEGDDGASGFSGAMGEHGLPGDLGQHGELGLKGDVGMEGPRGGVGAPGETGPR
GDAGPPGPKGGKGSKGSGGDKGKEGPQGRDGQKGQTGAPGFPGDVGDRGYMGYPGQPGGF
GPGGPKGSEGHGGLPGSDGDPGEDGPIGVPGLMGEPGEFGVKGSKGDRGVAGPRGRVGAV
GAEGGQGDAGVPGKPGPKGLQAQPGAKGETGPDGDKGAAGRKGVKGGKGQTGRVGGHGDK
GQRGPKGAVGRDGVPGPVGSPGIPGTRGERGPVGEAGVKGRAGAKGVPGPSGPGLSDQQV
LQLCRGVVTAQISQYASSIRAKCSQGCPINNRTLIGPPGVRGQMGSPGKPGKAGKAGAKG
ARGVQGDRGLEGQKGEQGDRAQKGPKGAAGDPGKGLPGPDGPQGLTGLPGHPAEPKNGME
GPRGPRGFPGQVGPPGTVGIAGVPGICEARDCSIHAPVTRKEQGLVKGPVSSKI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggagcctccagcgacacggcctctctcgtctccgggctcgtcgtgttcacgctgtgt
gtcgtcgtctctcgttgccaggacgaattctccggacaccactcagctgaagatcacacc
tacgaaggatctttggtcgaccactatgacgtcgtcgcctcccctccaccagagtatcct
ccggagccgacccgccgcagccacgaggagggggaccacgaccctcacggccgcagccgg
gtcaccatgatcacagaggacgccttcccttacgccaccaccaccgagtcccactacgcc
aaggaggacacggagaccatgcaggtcccgtatgagttccccgctgcaggaccggacacg
gactcctcgggggaggaggggccgacagactgcgactgtcaacctggagaacctggcttc
gctggcttcgccggaccaaagggatcccgaggcctgcagggtaagagcggtgagccaggg
actcaaggcagagagggttataaaggaaccaaaggggttcgtggaagaggaggagacgcc
ggaccagtgggcgacgttgggcccgagggagacgacggagcctctggtttctctggagcc
atgggagaacacggacttccaggagacctgggccagcatggagagctgggtctgaagggc
gacgtcggcatggagggaccccgcggaggagtcggcgctcccggtgagactggccctcgt
ggtgatgctgggcctccaggaccgaagggaggtaaaggttccaaggggtctggaggtgac
aaaggaaaagagggtccacagggtcgagacggacagaagggtcagaccggagcacccggg
tttccaggggacgtcggcgacagaggctacatgggttaccccggacagccgggaggcttc
ggacccggcggaccaaagggcagcgaaggtcacggcggcctgccaggcagtgacggtgac
cccggagaagatggtcccataggagtcccggggctgatgggagagcctggagaatttggt
gtcaaggggagcaaaggggatcgaggtgtggccggtcctcgaggcagagtgggcgctgtg
ggagctgaaggaggacagggagacgctggagtgccagggaaacccgggccgaagggcctg
caggcccagccgggggccaaaggtgagacgggacctgatggtgacaagggagcagcagga
aggaaaggcgttaaaggaggaaaaggtcaaacgggacgcgttggcggccacggggacaaa
ggacagcgtggaccaaaaggtgcggtcggtcgcgacggcgtccccggccccgtgggctcg
cccggcatcccagggaccagaggagagcgcggcccggtcggagaggcgggtgtgaagggc
cgagcgggagcgaagggagtcccaggtccctctggtcctggtctgagcgaccagcaggtc
ctgcagctgtgtcgcggcgtggtgacggcccagatctcccagtacgcctcctccatccgg
gccaagtgctcccagggctgccccattaacaaccggacgctcatcgggcccccgggagtc
cgcgggcaaatgggatcgcccggcaaacccggtaaagccggaaaagctggagcaaaagga
gccagaggtgttcagggcgacagaggcctggagggacagaagggcgagcagggtgacaga
gctcaaaagggacccaaaggcgccgcaggtgatcccggtaaaggcctgccaggaccagac
ggaccacaaggcctcacaggtttgccgggtcacccagcagaacctaaaaacggcatggag
ggtccccggggtcctcgcggcttccctggtcaggtgggcccacccggcacggtcgggatc
gcaggcgtgccaggaatttgcgaggcgcgggactgcagcattcacgcgccggtgacgcgc
aaagagcagggtctcgtgaaaggacccgtcagttcaaaaatctga
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