Scophthalmus maximus (turbot): 118284758
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Entry
118284758 CDS
T09850
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118284758 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118284758 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
118284758 (pdlim5b)
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Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
118284758
NCBI-ProteinID:
XP_035463665
UniProt:
A0A8D2ZKR8
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Position
20:8946078..8982189
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AA seq
616 aa
AA seq
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MSSSYSVSLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVRAKMSVGDLILSINGISTD
SMTHLEAQNKIKACTDNLSLILQRPSSAPKEGVPKDEPQEIIKPVPITHPAPSTAYTKPP
SQSSPAYNKTARPFGGAGGVLAASSPAAPRVASIPSESSAFTPAAPSQPPQPPFLLKSSH
PAPNSTPANSVPRPGPARSTFTSPSASSCSSNSSSPARVTAPSSQPTAPQPSVYNTPFNL
YSNANACEVAMGQRRGLLESQGLSENFNGKPVVEVEDHASPLSDSSKKRLMEDTEDWHPR
TGTSQSRSFRILAQLTGTENEQAPENNGKNEAVDKAAPAVHTSPAPKTYSKSAGAPRNGN
GVPTSAFKSPAAQNRPSYQPGGSPAGLGFPKGGAAPSFGKVTSPAPRGPDRPTPQPHPED
LNSLVQRAEHIPAGMRTPMCGKCNTVIRGPFLVAMGMSWHPEEFNCAHCHSSLADRGFVE
ERGQVYCECCYEQFFAPTCSRCNQKILGEVMNALKQTWHVSCFVCTACQQPIRGNTFHME
DGQPYCEQDFYNLFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCTVCSASLEGQGFFS
KKDKPLCKKHAHTVNL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtctccctggctggccctgccccctggggcttcagactgcaa
ggtgggaaggacttctgtctgcccctcaccatctctcggctgactgatggaggcaaggcg
gtccgagccaagatgagtgtcggagacctcatcctttccatcaatggcatttccaccgac
agcatgactcacctagaggcccagaacaagattaaggcctgtacagacaacctcagcctc
attctacaaagaccctccagtgcccctaaagagggagtgcctaaggacgagcctcaggaa
atcataaagcctgtcccaatcactcaccccgccccgagcaccgcatacaccaagcctccg
agtcagtccagtcctgcgtacaacaagacagctcggccgttcggcggggccggcggtgtg
cttgcagcttcctccccagccgcccccagggtggcctccattccctccgaatcctccgct
tttacgccagctgccccttctcagccaccgcagcctccatttctgctgaagtccagccac
cctgctccaaactcgactccggccaactcagttcccaggcccggccctgctcgctcaacc
ttcacctccccatctgcctcttcctgctcatctaactcctcctccccagccagagtgaca
gccccctcctcccaacccactgccccacagccctccgtctataacacacctttcaacctc
tactctaatgccaacgcttgtgaggtggcgatgggacagaggcgaggtcttttggagagc
cagggcctgtcagagaacttcaacgggaaacctgtcgtagaggttgaggatcatgcgtcc
ccgctgagcgattccagcaagaagcgtctgatggaggacacggaggactggcacccgcgg
accggcacctcccagtcccgctccttccgtatcctggcccagctcactggcactgagaac
gagcaagctccagagaacaatggaaagaatgaggcggttgacaaagccgctcccgctgtg
cacacgtcgcctgcaccaaagacatattccaaatctgcaggagcacccaggaatggcaac
ggcgtacccacttccgcattcaagagccctgcagcccagaacaggccgtcgtaccagcct
gggggttcaccagctggtttaggttttccaaagggcggagcagctccttcgtttggcaaa
gtcaccagtcctgctcccagaggtcccgaccgccccaccccacagccccacccggaggac
ctcaactctctggtgcagcgggccgagcacatcccagccggtatgcgcaccccgatgtgc
ggcaagtgcaacactgtcataagaggcccgttccttgtggccatgggcatgtcgtggcac
cccgaggagttcaactgcgctcactgccactcgtccctggcagaccggggatttgtggaa
gagaggggccaggtgtactgcgagtgctgctacgagcagttcttcgcccccacctgctcc
cgctgcaaccagaagattctgggggaggtcatgaatgccctgaagcagacctggcatgtg
tcttgtttcgtctgcaccgcctgccaacagccaatcaggggcaacacgtttcacatggag
gatggacagccatactgcgaacaagacttctataacctgtttgggaccaactgccacggc
tgcgacttccccatcgaggcgggcgacaagttcctggaggccctgggattcacctggcac
gacacctgcttcgtgtgcacagtctgctccgccagtctggagggtcagggatttttctcc
aaaaaagacaagcccctgtgcaagaaacatgcccatactgtcaacctctga
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