Scophthalmus maximus (turbot): 118284941
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Entry
118284941 CDS
T09850
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118284941 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118284941 (grin1a)
04082 Neuroactive ligand signaling
118284941 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118284941 (grin1a)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118284941 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
118284941
NCBI-ProteinID:
XP_035464059
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Position
20:complement(3052646..3085604)
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AA seq
968 aa
AA seq
DB search
MRLLLLAALLSCSCARAGCEPKVVNIGAVLSQKRYEQVFKDAVTQANLVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKTRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMPDGTCHEEITLNGVLIKKVICTGPNETIPGNTSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKETSGSQVVTGTPSL
PSSSLETQDDRKSGRAEPDPKKKASFRSISTNLASSIKRRRSSKDTQFPPTDITGQLNLS
DPSVSTVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcctcctgctcgcggcgctcctctcgtgctcctgcgcgcgggccggctgcgag
ccgaaggtcgtgaacatcggcgccgtgctgagccagaagaggtacgagcaggtgttcaaa
gacgccgtgacccaggcgaacctggtgtacggccgcgacaagttcaagctgaccgccatc
tccgtcacgcacaagcccaacgccatccagatggccctgtccgtgtgcgaggacctcatc
tccagccaggtctacgccatcctggtgagtcaccctccccagtccaatgaccacctcacc
ccgacgcccgtctcctacaccgcgggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactcagacaagagtatccacctgtccttcctgcggacagtcccgccc
tactcccaccaggcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtgagcgacgaccacgaggggcgggccgctcagaagaggctcgagaccctg
ctggaggagagagagacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggcccgcgtcatcatactgtcggcc
agtgaggaagacgctgctgcggtgtacaaggcggcccgcttcctcaacatgacgggctcg
ggctacgtgtggctggtgggcgagcgggagatgtcgggtaaagcgctgagcgaggcgcca
gacggtctgatcggcctccagctcatcaacgggaagaacgagtcggcccacatcaacgac
gcggttgccgtggtggctcagtccatccaggagctgtttgagaaggagaatatcacggag
cctccgagaggatgcgtgggcaacaccaacatttggaaaacggggccccttttcaaacgg
gtgctcatgtcgtccaaatacccagagggcctcacggggcgcgtggaattcaatgacgac
ggtgacaggaagtacgcccactacagcatactcaactaccagaagactcgactcattcaa
gtcggcatatacaacggaacacaggtggtgatgaacaatcagcggaagatcatctggccg
ggaggagagactgagaaaccacagggcttccagatgtctactcgattaaagatagtgacg
atacaccaggagccgttcgtgtacgtgaagcccactatgccggacggaacgtgccacgag
gagattacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacacttcaggtcgcccaatcgtaccccagtgttgctacggattctgcatc
gacctcctgatcaagctagctatgaccatgaacttcacctacgaggtgcacctggtggct
gatgggaagtttggaactcaggagagggtgaacaacagtaacaagaaagagtggaacggc
atgatgggagagctcctggggggcctggccgacatgattgtcgccccgctgactataaac
aacgagcgagcccagtatatcgagttctcgaaaccctttaagtatcagggcctcaccatc
ctcgttaaaaaggaaatccctcgcagtacactggactcgttcatgcagccgttccagagc
acgctgtggctgctggtgggtctatcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtgaacagtgaagaagaagaggaggacgcc
ctcaccttatcgtctgccatgtggttctcctggggagtgttgctgaactctggaatagga
gaaggtgcgccgcgcagcttctcagcgagaatcctgggtatggtgtgggccggctttgct
atgatcattgtggcctcttacactgccaatctggctgccttccttgtgttggaccggcct
gaggagcgcatcaccggtatcaatgacccaaggctgagaaacccatcagacaagttcatc
tacgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggctatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgctcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcat
gagaacggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgaaaacatggcaggggtcttcatgctggtt
gccggagggattgcagcggggatcttccttatcttcatcgaaatcgcctacaaacgacat
aaagacgcccgcaggaagcagatgcagctggcctttgcggccgtcaacgtttggaggaag
aacctgcaggacagtaaggagacctctggaagtcaagtggtgaccgggaccccctcatta
ccctcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgacccc
aaaaagaaagcctcttttaggtccatcagtaccaacctggcctccagcatcaagagacgt
aggtcctccaaagacacgcaattcccacccactgacatcacgggccaactcaacttgtct
gacccgtctgtcagcactgtggtgtaa
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