Scophthalmus maximus (turbot): 118284950
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Entry
118284950 CDS
T09850
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118284950 (cacna1bb)
04020 Calcium signaling pathway
118284950 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118284950 (cacna1bb)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118284950 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
118284950
NCBI-ProteinID:
XP_035464085
LinkDB
All DBs
Position
20:2634057..2738500
Genome browser
AA seq
2563 aa
AA seq
DB search
MKRAVPHNSRWAETRSRVVYAVCSATFASWRLLTLGAGYEDTWAKSPDRKPRTGQRAEEK
GEEAEDQEEGEPSWRSADSNAGHKYDTVVHLDGGRRGGVHQLVWKHDTLHSIPWPHRMAR
FAEDLPSRYGAGGGAGGGGGGGGGGGRGGPGAGRGGARGGGVGGVGGAPGGQRMYKQSMA
QRARTMAIYNPNPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCI
VLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMD
FVVVLTGILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLL
FFAIVMFAIIGVEFYMGKFHTTCFRIDTGEKAAGNWPCGLEPPARTCPNGTQCREYWTGP
NFGITNFDNILFAVLTVFQCITMEGWVEILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNL
VLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEK
SPLDGAWYKRKQNLPVLKRGKVKKGKNDLIGAEEGEDPFADISSVAPPGSPFGRASVKSG
GGGGKMDSSSYFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTR
ALYTAEIVFLGLFLTEMSMKMYGLGVRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASF
GISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFG
GQFNFEEETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVL
TLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPISAANI
SIAAFVKQNREALSRRSSINSIQSPSFTVFSSPARRILSKEQQRSMKSMSVWEQRTNQLR
KHTLRASSEALFNELDPEERLRVSSALHLHPDMKTHLDRPLVVEARNGDKPSRPPEGGGR
EEAGDDGVHAHARKHHRHRDRNGESSDGRGGRHHAHHSRSRDHNADGAQTGEGRLERSRS
REGAPGHRHHHHHHQAGSPEEEGEEEATNGVHAGDERGNLHHHSHRPQKEGNGMMANGAQ
GERKGRGGGGGGGGGGGDSNGERKGRCSRMVRAQSTLDGDDCRRNRNGARGHRDRQPDAE
DNGLASSPLQLMRSSPSLGEKQEDADNQKNSTRASQAGLNSNAIHIPVTITAPPGDTTII
PMNSIDCDNFQISDEKKDLEEEEEAANGPRQILPYSSMFVFGQTNPVRRLCHYVVNLRYF
EMCILMVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPG
SYFRDLWNILDFIVVSGALVAFACSSLMGSQQSVARGTKGKDINTIKSLRVLRVLRPLKT
IKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKD
CRGQFLSYDRDDVAAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATYED
QGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACID
FAINAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYAIMSLIALNTVVLMMKFYGAPDLYES
MLKYLNILFTALFTLECVLKVIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKMI
NLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFG
NIELNEDTAINHHNNFQTFFQALTLLFRSATGEAWHEIMLACLSNRPCDRLSGTAGKECG
SDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAA
CGRICYQDMYKLLRFISPPLGLGKKCPNRVAYKRLVRMNMPIADDNTVQFTSTLMALIRT
ALEIKLASGVLAQRLCDADLKREISRVWPNLSQKTVDLLVTPHKYNELTVGKVYAAFMIF
DFYKQNRAKRLQQQNPAGGHQSKLGTLFRPVLPLTHLQHVEPPACSPKQPLPPQPQADAK
PEAPPTSATITTAAAPINRDTIVNQRSAIKHSQSGDVSQATQRPTGRRKLQRGQSEDVTY
STRPQELVELKQVENISDSEEYPSLEGHSRAASLPRLNAEYYRIHPRHAPGTHLAPIVDL
SPIRRSASSLTPHHHHRQEAAGLREYDLERPGPAQDRAHHHHHHHRCHRRRDKDKDKKQK
SLDRAGSVQPSSTVDSFTDPSAEGLSRERARERDRSRPHERRHHSSAGEKQRYYSCERYG
SREQCHARSAGPSRSTSPGDGPDAVLLKHHGSSVVKAGAVPLPSGTSTPGRGRRQLPQTP
LTPRPAVAYKTANSSAVPPGAGSSTATGHQTRFSRGLSEHDRLFGDHGESPTPVARISSD
PNLNRQQRDASQRALLEETEDFQDAVSSHGGGGGGGRAARTTASTTASASHATAAAPVTA
QGRAAAAAAVPNGYHFTLGVHSGSGPGGRGAGSLREREEEDWC
NT seq
7692 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcggttcctcacaactccagatgggcagagacgcgatccagagtggtttac
gcggtgtgctcagccaccttcgcctcctggaggctgctcaccctgggggcggggtacgag
gacacctgggcaaagtcgcctgacaggaagccccgcaccgggcagcgggctgaggagaag
ggggaggaggccgaagaccaggaggaaggagagccatcgtggagatccgctgactccaac
gccggacacaagtatgacacagttgttcacctggacggaggacggagaggtggagtccat
cagctcgtctggaagcacgacaccctccacagcatcccatggccccacagaatggctcgc
ttcgccgaggacctgcccagtcgctatggagcaggaggaggcgcgggcggcggcggagga
ggaggaggaggaggaggcagaggtggaccgggcgccgggagagggggagcccggggcggc
ggcgtcggcggcgtcggcggcgctccgggcggccagaggatgtacaagcagtcgatggcc
cagcgagcccggacgatggccatttacaacccgaaccccgtcaaacagaactgcttcacc
gtcaaccgctcgctcttcatcttccgcgaggacaacctcatcaggaagtacgcgaagagg
ataaccgagtggcctccgtttgaatacatgatcctggccacgatcatcgccaactgcatc
gtcctggccctggagcagcatctccccgccagcgacaagacgcccatgtcggaacgcctg
gatgacacagagccctactttattggaatattctgtttcgaggccgccattaagatcatc
gccctgggcttcgccttccacaaaggctcctacctccgcaatggctggaatgtaatggac
tttgtggtcgtcctcacgggaatcttggccacggtgggttcagactttgacctgaggacg
ctgcgggcggtccgcgtgctgagacccctgaaacttgtgtcgggaatccccagtctccag
gtggtgttgaagtccatcatgaaagccatggttcccctgctgcagatcggcctgctgctc
ttcttcgccatcgtcatgttcgccatcatcggggtggagttctacatgggcaagttccac
accacctgcttcaggatcgacacgggtgagaaagcagccggcaactggccttgcggtctg
gagccgccggccaggacgtgtcccaacgggacccagtgcagggagtactggaccggaccc
aacttcggcatcaccaacttcgacaacatcctgtttgcggtgctcaccgtgttccagtgc
atcaccatggagggctgggtggaaatcctctacagcaccaacgacgtggcaggaaacacc
tggaactggctctacttcatccccctcatcatcatcgggtccttcttcatgctcaacctg
gtgctcggtgtcctatcaggagaatttgccaaagagagagagcgcgtggagaagaggcag
gagttcctgaagctccggcggcagcagcagatcgagagagagctcaccgggtacctggag
tggatctgcaaagcggaggaggtgttgctggaggaggaggatgagatcgcagaggagaag
tccccgctggacggtgcgtggtacaagaggaaacagaacctgccagttctgaaacgaggc
aaagtcaagaaaggtaaaaacgacctgatcggcgccgaggagggggaggatccgttcgcc
gacatctcctccgtcgcgccccccggctctccgttcggccgagccagcgtgaaaagcggc
ggcggcggcggcaagatggacagctcgtcgtacttccgccgcaaggagaagaggacccgc
ttcttcatccgacgcatggtgaaggcccagagcttctactggatcgtcctgtgtctggtg
ggactcaacacgctgtgcgtggccatcgtccactacgaccagcccgactggctcacgagg
gccctctacacggcagagatcgtgttcctgggcctgttcctgacggagatgagcatgaag
atgtacggcctcggagtgcggaattatttccattcgtcctttaactgcttcgattttggg
gtgatcgtggggagcatcttcgaggtgatctgggacatgatcaaaccgggggcgtcgttc
gggatcagcgtgctgagagcgctgcggctgctccggatattcaaagtcaccaaatactgg
aactcgctgaggaacctggtggtctccctcctgaattcgatgaagtccatcatcagcctg
ctcttcctcctcttcctcttcatcgtggtcttcgccctgctgggcatgcagctctttgga
ggacagtttaactttgaagaagagacgccgacaaccaactttgataccttcccagcagcc
atcctcactgtgttccagattctgaccggcgaggactggaacgccgtgatgtaccacggg
atcgagtctcagggaggcgtccgccgcggcatgttctcctccgtctacttcatcgtcctc
acgctcttcggaaactacactctcctgaatgtcttcttggccatcgccgtcgataacctg
gccaacgcacaggagctgacgaaggacgaagaggagcaggaggaggcggccaacaagaag
ctggccctgcagaaggcgctggaggtgaaggaggtcagccccatatcggcggccaacatc
tccatcgccgcttttgtaaagcaaaatcgagaggctctctctcgcaggtcgtccatcaac
agcattcagtcaccgagttttactgtcttctcctcccccgcccggcgaatcttgagtaag
gagcagcagcggtcgatgaagagcatgtcggtgtgggagcagaggaccaaccagctgagg
aaacacaccctgagggcgagcagcgaggcgctgttcaacgagctggaccccgaggagcgc
ctgcgcgtgtcctccgccctccacctgcaccccgacatgaagacccacctggaccggccg
ctcgtggtggaggccaggaacggcgacaagcccagcaggcctcccgaagggggcgggcgg
gaggaggcgggggacgacggcgtccacgcgcacgccaggaagcatcaccgccaccgcgac
cgaaacggggagagcagcgacggcaggggagggcggcaccatgcccatcacagcaggagc
cgagatcacaacgccgacggcgcccagacgggggaggggaggctggagaggagccgcagc
cgcgagggcgcgccggggcacaggcaccaccaccaccaccaccaggcgggctcccccgag
gaggagggggaggaggaggcgaccaatggcgtgcacgcgggagacgagaggggaaatctg
catcaccattcccaccgtccgcagaaagaggggaacgggatgatggcgaacggcgcacag
ggagagcgcaaggggaggggagggggagggggaggaggaggaggggggggggatagtaac
ggggagaggaagggacgctgctctcgcatggtccgagctcagtccaccctggatggagac
gactgtaggaggaacagaaatggagccaggggccacagggacaggcagccagacgccgag
gacaacggcctcgcctccagtcctctgcagctgatgcgcagcagcccgagcctcggggag
aagcaggaggacgccgacaaccagaagaactccaccagggcgagccaggcgggcctcaac
agcaacgccatccacatccccgtcaccatcaccgccccgcccggggacaccaccatcata
cccatgaacagcatcgactgtgacaacttccaaatcagcgacgagaagaaggatctggag
gaggaggaggaggcggctaatgggccgcggcagatcctgccctacagctccatgttcgtc
ttcggacaaaccaatccggtgcggcggctgtgtcactacgtggtcaacctgcgctacttt
gaaatgtgcatcctgatggtcatcaccatgagcagcatcgctctggcggccgaggacccc
gtgcaggccaacgcgccgcgcaacaacgttttgaagtatctggattatgtcttcactgga
gtcttcacatttgagatggtgatcaagatgattgacttggggctgctgctgcaccccggc
tcttatttccgcgacctgtggaacatcctggacttcatcgtggtcagtggagccctggtg
gcctttgcctgctcgagcctgatgggatctcaacaaagcgtggccagagggaccaaaggg
aaggacatcaacaccatcaagtccctccgggtgctgcgggtcctgaggccactcaagacc
atcaaacgtctgcccaagctgaaggccgtgttcgactgcgtcgtgaactccctgaagaac
gtcctcaacatcctcatcgtctacatgctcttcatgttcatcttcgccgtcatcgccgtg
cagctcttcaagggcaaattcttctactgcaccgacgagtccaaggggctggagaaggac
tgcaggggtcagtttctgtcctacgacagagacgacgtggcagctcagccccgggagtgg
aagaagtacgagttccactacgacaacgtgctctgggccttcctgacgctcttcaccgtg
tccaccggggagggctggccactggtcctgaaacactctgtggacgccacgtacgaggac
cagggcccgagccccggcttccgcatggagacgtccatcttctacgtggtctacttcgtg
gtgttccccttcttcttcgtcaacatcttcgtggctttgatcatcatcaccttccaggag
cagggcgacaaggccatgtccgagtgcagcctggagaagaacgagagagcctgcatcgac
tttgccatcaacgccaagccgctgacgaggtacatgccgcagaacaagcagtcgttccag
tacaagatgtggaagttcgtggtgtcgccgccgttcgagtacgccatcatgtcgctgatc
gccctcaacaccgtcgtgctgatgatgaagttctacggagccccagacctgtacgagtcc
atgctgaaatacctgaacatcctcttcacggccctcttcaccctggagtgcgtcctcaag
gtcatcgccttcggccctctgaactacctgaaggcagcgtggaacgtgttcgactttgtg
acggtgctcgggagcatcacggacatcctggtcacggagatcaagacggacaagatgatc
aacctgagctttctgcgactcttccgagcggctcgcctcatcaagctgctgcggcagggc
tacaccatccgcatcctgctgtggaccttcgttcagtccttcaaggctctgccgtacgtc
tgcctgctcatcgccatgctcttcttcatctacgccatcattggaatgcaggtgtttgga
aacatcgagctgaacgaggacacggcgatcaaccaccacaacaacttccagaccttcttc
caggccttgacgcttctcttcaggagcgcgacgggcgaggcgtggcacgagatcatgctg
gcgtgcctcagcaaccggccgtgcgatcgtctctcgggaaccgcggggaaggagtgtgga
agtgacttcgcctacttctactttgtctccttcatcttcctctgctccttcctgatgttg
aacctcttcgtcgccgtcatcatggacaacttcgagtacctgacgcgggacgcctccatt
ctggggcctcatcacctggatgagttcatccgcgtgtgggcggagtacgaccccgccgcc
tgcgggaggatttgctatcaggacatgtacaaattgttacgctttatctcccctcctctg
ggtctggggaagaagtgtcctaacagggtggcttataagcggctggtgaggatgaacatg
cccatcgcggacgacaacacggtccagttcacctccacgctcatggccctgatccgcacg
gccctggagatcaaactggcgtccggggtcctggcgcagcgtttgtgcgacgccgacctg
aagcgggagatcagcagagtctggcccaacctgtcgcagaagaccgtcgacctgctggtg
acgccgcacaagtacaacgagctgactgtggggaaagtctacgcagctttcatgatcttc
gacttctacaagcaaaatcgtgccaagagactccagcagcagaacccggccggaggacac
cagagtaaactggggacgctgttccgtcccgtgctgccgctcacgcacctgcagcacgtg
gagccgccggcctgcagccccaagcagcccctcccaccccagccgcaggcggacgccaag
ccagaggccccgcccaccagcgccaccatcaccacagccgccgccccgataaacagggac
acgatagtaaaccagagaagtgccatcaaacactcccagtccggagacgtctcccaggca
acgcagaggcccacgggtcggaggaagctccagaggggccagtcggaggacgtgacgtac
tccaccagacctcaggagttggttgaactgaaacaggtggagaacatttccgactcggag
gaatatcccagtctggagggccactcccgggccgcctccctcccccggctcaatgctgag
tactaccggatccaccctcgccacgcccctgggacccacctggcaccgatcgtcgacctc
agtcctataagacgctcggcgtcctcgctgacgccgcaccaccaccaccgccaggaggcg
gccgggctgagggagtacgacctggagcggcccggcccggcccaggacagagcccaccac
caccaccaccaccaccgctgccaccgacgcagggacaaggacaaggacaagaagcagaag
tcgctggacagagctggatcagtgcagccgtccagcaccgtcgattcgttcaccgacccg
tcagccgaaggtttgtcccgggagcgagcgagggagcgcgaccgcagccggcctcacgag
cggaggcaccactcctcggccggggagaagcagcgctactactcgtgcgagcgctacggc
agcagggagcagtgtcacgccaggtcggccgggcccagcaggtccacgtcgcccggcgac
gggccggacgccgttctgctcaaacaccatggtagcagtgtggtcaaggccggcgccgtg
ccgctcccctctggcacgagcacgccgggccgcggccgcaggcagctgccgcagacgccc
ctcacccctcgccccgccgtggcctacaagaccgccaactcctcagctgtcccgcccggc
gccggcagcagcaccgcgacgggacaccagactcgcttcagccgtggcctttcggagcac
gaccgcttattcggggaccacggcgagtccccgacgccggtcgcccgcatcagctcggac
cctaatttgaaccggcagcagcgggacgcttctcaacgggccctcctcgaggagacggag
gacttccaggacgctgtgagcagccacggaggaggaggaggaggaggccgcgccgccaga
accaccgcctcaaccactgcctctgcttcacacgcaactgcggcggcgcccgtcacagcg
cagggccgagcggcggcggcggcggcggtgccgaacgggtaccacttcaccctcggggtc
cactctgggtctgggcccgggggcaggggagcaggaagtctcagggagagggaggaggag
gactggtgctaa
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integrated database retrieval system
