Scophthalmus maximus (turbot): 118285083
Help
Entry
118285083 CDS
T09850
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118285083 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118285083 (setd1ba)
Enzymes [BR:
smau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
118285083 (setd1ba)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118285083 (setd1ba)
HMT complexes
COMPASS/SET1 complex
118285083 (setd1ba)
COMPASS/SET1 complex (yeast)
118285083 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
118285083
NCBI-ProteinID:
XP_035464313
LinkDB
All DBs
Position
20:8555654..8573244
Genome browser
AA seq
1826 aa
AA seq
DB search
MSKPGERNRFNEDHGRKQSSSLANGMDSHPVCGSAEKRSHHWRSYKLIIDPALKKGPHKL
YRYDGQTFNMPNPGIPPVDIVRDPRIGRLWTKYKETDLPVPKFKIDECYIGPVPPKEVTF
ARLNDNIREGFLTDMCKKFGDIEQVEILYNPKNKKHLGIAKVVFENVKAAKVAVQSLHNT
SVMGNIIHVELDPKGENRLRYFQLLMNGSYTPKTLPVGGEDARDVSPRSLAEAILACEPI
RRLSESSAGSTVPPSSSTTPLSLETGYSSLRQDTPQSQGTPHTPRQTSTPYSQDSNYSSR
QSTPAYQSSRPESSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRSTTSEQAPFKQHQAT
PPEPPPSTPPYTYTAPPPATPNFYQAPLPPAFPPSEPTFHHPAQREGEYLRPPQPPLAAA
TDFLPTKERPETPPIPEPPPEPEAHPATPPPPQTPERCPSPASPTLDLERNSLDSRIEML
LKEKRTKLLPFLEERDSDTEVRMEGSPISSSSSQLSPIPPYTSGSQGGPQNSRPQSTGLE
DISPTPLPDSEDEEPIPGTASLVKRMSSPVHEKMSNSDLKDGHFRCHTPTDNMEMSHQSS
GEDMEISDDEMPGSPIASGECGKGIVVNSAVSPMQTIPMPPPGFPPLPHQASYAITQHHL
AAHSAAAGHPAHLAGHPGVPHHMLAHMGPYPHGMMPLVQMELMNCLRWEQWSTVPMSFQM
QQQMLSRIAQTRGPYPYPHFMDSGASGPFAGPYQPVSLGAAPSAGNAGAPEQQQQQQQQW
QHPIIPKFNPTVPPPGYESKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRA
FDDWWEKKERSAKASLTPVKGAEGKEEDRPKPKETMGSSLLENWNKGEGLGYEGMGLGIG
LRGAIRLPSFKVKRKDPPEAVAAGDSKRARPSTPVDDELEDEDRDRDPAELPLDDSKMDA
DGMAAKRRHSRPLELDSEGEEEGDTSGKEEEFLSDREDEPDETEATDRLSSDKESGDEED
DDEDSSSESASSDSSDEEAESSTSSKDSSDSSAESADSSEHELSSEEEDDIEMGVKDAEV
DVKEAKASLSSSSSASSSSDEEDGEAEARPPSPPAGLVPDKEEKRSKDMLSSKSKRRPPS
PKEEPMDVKPSSPKGVAEREIGEDNIPVVKSEPQERVASLRPPTPTGAAPESDQESKAKG
KTEPEEVACIPSRLAPPTPDSNTSVPKPASASLMHLPLPPHPVVEGRSLLHPPPGPLPDL
PQRPRLPTDEDIPRTPGRDLMDRARGLGKSQSTDTVPNTPGSDAPLTGSSMLLSSPHIPG
SPFSYPAQSPVLSAGVPRTPGRDLTFTPVFPDPTALTLNRKASSESLDDRPVFKEPPISA
LPNQALSAGAEHSASVPEDLPAGLNVDVPLPSDTATSKRKPGRPKAKKIPATSAADESLE
LSSESTPQTNDTHLEDVDVQTVSAKSPDNPSLDFREEEAAPRTVLPAEDGFVSYEDEAPV
VVKPARRARRCWEELLLNSLSPVTTPPRPYFKRRSNFEEVTILYDIWNEGIDEEDIRLLQ
ITYDKMLQQDNGNDWLNDTLWVNHPSTHVPGVKKKRRDDGMRDHMTGCARSEGYYKIDKK
DKIKYLQSTRLLSEEPPVDTQGMSIPAQVHASTRAGSERRSEQRRLLSSFACDSDLLKFN
QLKFRKKRIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEEEGIGS
SYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSRQPINVNEEIT
YDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgggggagcgaaacaggtttaacgaagaccatggcagaaagcagagttca
agtctggcgaacggcatggacagtcatcccgtctgcggctcggcggagaagcggagtcac
cactggagaagttacaagttgatcatcgacccggcgctgaagaaggggccgcacaagctc
taccgctacgatggacagacgttcaacatgcccaaccccgggattccaccggtggatatt
gttcgagacccgaggatcggccgcctctggactaagtacaaagagacggatctaccggtg
ccgaagtttaagatcgacgagtgctacatcgggcccgtgcccccgaaggaggtgacgttc
gcgcggctcaacgacaacatcagggaagggttcctcacggacatgtgcaagaagttcggc
gacatcgagcaggtggagatcctctacaacccgaagaacaagaagcacctgggcatcgcc
aaagtggtgttcgagaacgtgaaagcggccaaagtggccgtgcagtcgctccacaacacg
tccgtcatgggaaacatcatccacgtggagctggacccgaaaggtgagaatcgcctgagg
tacttccagctcctgatgaatggcagctacactcccaagaccctgcccgtaggcggagag
gatgccagggacgtttcccctcgtagcctggcagaggccatattggcctgcgagcccatc
cgcaggttgtccgagagcagcgccggatcgacggtgccacccagcagctccaccactcct
ctctctctagagacgggctactccagcctaaggcaggacacgccgcagtcccagggaacc
cctcataccccacgccagacaagtacgccctactctcaggactccaactactccagtcgt
cagtccacgcctgcttaccagtccagccggcctgagagctccggaggatacaaatcccgg
agacacgagagtaagttccaggacgcgtacaatcgcagaccggagaggccgcaataccgc
agcaacatgtaccggagtacgacatctgaacaagctcccttcaaacagcaccaagccacc
ccacctgaacctccaccctccacccccccttacacttacacagcgcctccccctgctacg
ccaaacttctaccaggctcccctgcctcctgcattccccccgtcggagcctaccttccat
cacccagcccaaagggagggtgagtacctccgaccacctcagccgccactggcagctgcc
actgactttttgcccaccaaggagagacctgaaacccctccgattcccgagcccccacca
gagcctgaggcacatcccgccacccctcctcctcctcaaacaccagaacgctgcccttca
cctgcctcccccacgctggatctagagcgcaatagcctggactcccgcattgagatgctc
ctcaaagagaaaaggacaaaactgctgcctttcctggaggagcgagattcagacaccgag
gtgcgaatggagggaagtccgatttcctcctcgtcctctcagctatccccaattcccccg
tacacgagtggctctcagggtggcccacaaaactcccgtccccagagcacgggcttggag
gatatcagtccgacgccgctgccagactccgaggatgaggagccgattcccggaactgcc
tctctggtcaagagaatgagttctcctgtccacgagaagatgagcaacagtgacctcaag
gatggacactttcgatgccacactcccactgataacatggagatgagtcatcagtcgtcg
ggagaagacatggaaatctccgacgacgagatgcccgggagtccgatcgccagcggggag
tgtggcaagggcattgtcgtcaactctgcggtgtccccgatgcagaccattcccatgcct
ccccccggcttcccccctctgccgcaccaagccagctatgcgatcacgcagcaccacctg
gccgctcactctgctgccgcgggacatcccgctcacctggccggtcatcctggagtgcct
caccacatgcttgcacacatgggcccctacccacatggcatgatgccactggtgcaaatg
gagctaatgaactgcttgcggtgggagcagtggagcacggttcccatgtcgttccagatg
cagcagcagatgctgagtcgcatcgctcagacgagagggccctacccatacccacatttt
atggacagtggtgcatcagggccgtttgccgggccgtaccaacccgtgtcccttggtgct
gcgccctcggccggcaatgcgggggcacccgaacaacaacaacaacaacaacaacaatgg
cagcatcccattataccaaagttcaaccctactgttcctcctcctggatatgagagtaaa
aaagaggatccgcacaaggccactgttgatggtgtgctgctggtcatcgtcaaggagctg
aaggccatcatgaagagggacctcaaccgcaagatggtggaggtggtggcgttcagagcc
ttcgacgactggtgggagaagaaggaacgttcggcaaaggcatccttgactccggtaaag
ggtgcggaggggaaagaggaagacagacccaaacccaaagagacgatgggttcaagtctg
ctggagaactggaacaagggcgagggactgggctatgagggaatggggctgggaatcggt
ttgcgaggcgccatccgcctaccctccttcaaggtgaaaaggaaagacccaccggaggcc
gtggcagcaggcgacagtaaacgggcccgtccctccactccagtagacgacgagctggag
gatgaagaccgggatcgagacccagctgagctccccttggacgattcgaaaatggacgca
gatggcatggctgcaaagcgacggcactcgcggccgctcgagctggacagtgaaggagag
gaggagggggacacctcagggaaggaggaggagtttctgtccgacagggaggacgaaccc
gatgagacagaggccacagaccggctgtcgtcagacaaagagagtggcgacgaggaggat
gatgatgaagactcgtccagtgagagcgcttcctccgattcatctgatgaagaagccgag
agttccacttcctccaaggacagctctgactcctcggcagagagcgccgactcgtccgag
cacgagttgagctcagaagaggaggatgatatcgagatgggagtgaaagacgccgaggtt
gatgtcaaagaggccaaggcgtccttgtcttcttcatcctcagcatcttcatcttccgat
gaagaggacggggaggcagaggcaaggccaccaagcccacctgcaggactggtcccagat
aaagaggagaaaaggagcaaggatatgctgagcagcaagtccaaacgaagacctcccagt
cctaaggaggagccaatggacgtgaagccctcatcacctaaaggcgtcgcagagcgagaa
atcggagaggataacattcctgtagtgaagtctgaacctcaggagcgtgtggcgagcctt
cggccgcccactcccacaggcgccgcccccgaaagtgaccaggagtcaaaagccaaaggt
aaaacagagcccgaggaagtagcctgcatccccagtcgattagccccacccaccccagac
tcaaacacttctgtccccaaacccgcctccgcatctttaatgcacctccctcttcctcct
caccctgtggtagaaggtcgctccctccttcatccgccccctggtcccttacctgacctc
ccacagcggcccaggctccccacagacgaggatatcccccggacaccgggtagggacctg
atggaccgtgcccggggtctggggaagtcccagagcacggacacggtgcccaacacaccc
ggtagtgatgccccacttacaggcagtagtatgttgcttagctcgcctcacatccccggt
agccccttctcctatcctgctcagtccccggtcctcagtgctggagtcccccgcactcca
ggaagagacttaaccttcacccctgtcttccccgaccccacagcactaactcttaataga
aaagcatcctctgagagcctggatgatagacccgtttttaaggagccgcccattagtgca
ctacctaaccaagccctgtcagctggcgcagagcactcagctagtgtccctgaagatctg
ccagccggtctcaatgtagacgtccctttgccatcagacaccgctacatccaagaggaaa
cccggacgacccaaagccaaaaagatcccagccacctctgcggccgacgagtccctcgag
ctctcgtcggagtccacccctcagaccaacgacacgcatctggaagatgtcgacgtgcaa
acggtgtccgccaagtcgccagacaacccaagcctggacttccgggaagaagaagcggcg
cctcggacggtcctgcccgccgaagacggcttcgtgtcctacgaggacgaggcgcccgtg
gtcgtgaagcccgctcggagggcgcggcgatgttgggaagagctgctgctgaacagcctg
tcccccgtcaccacgcctccccggccgtacttcaagcggcgcagcaactttgaggaggtg
accatcctgtacgacatctggaacgagggcatagacgaagaggacattcggctcctgcag
atcacctatgacaagatgctccagcaggacaacggcaatgactggctcaacgacacactc
tgggtcaatcacccttctacccacgttcccggggtgaaaaagaagaggagagacgacgga
atgagggatcacatgaccggctgcgcccgaagcgaaggctattacaagatcgacaagaaa
gacaagatcaagtacctccagagcacacggctgctgtcggaggagccgcccgtcgacaca
cagggtatgagtatacctgcgcaggtccacgcctccaccagagctggctcggagcggcgg
tcagagcagcggcgcttgctgtcctctttcgcatgcgacagtgacctgctgaagttcaac
cagctgaagttccgtaagaagaggatcagattctgcaagtcgcacatccacgactggggt
ctgtttgccatggagcccatcgccgccgatgaaatggtgatcgagtatgtcggtcagaac
atcagacaggtgattgccgacatgcgggagaagcgctacgaggaggagggcatcggcagc
agctacatgttccgcgtcgaccacgacacaatcatagatgctacgaagtgcggcaacttc
gcccgtttcatcaaccacagctgcaaccccaactgttatgcgaaggtcatcaccgtggag
tctcagaagaagatcgtgatctactcccggcagccgatcaacgtcaacgaggagatcacg
tacgactacaagttccccatcgaggacgagaagatcccctgtttgtgcggggcagagaac
tgtagaggaacactgaattaa
DBGET
integrated database retrieval system
