Scophthalmus maximus (turbot): 118285142
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Entry
118285142 CDS
T09850
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04145
Phagosome
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118285142 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118285142 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118285142 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118285142 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118285142 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118285142 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118285142 (thbs3a)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Phagocytosis
Opsonins
118285142 (thbs3a)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118285142 (thbs3a)
Exosomal proteins of colorectal cancer cells
118285142 (thbs3a)
Exosomal proteins of bladder cancer cells
118285142 (thbs3a)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118285142 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
118285142
NCBI-ProteinID:
XP_035464438
LinkDB
All DBs
Position
10:complement(19675871..19688932)
Genome browser
AA seq
951 aa
AA seq
DB search
MGCSVPVLLSLLCVRLTTGVPDGPDAQVIDVLSLQDSRQSVAAVEKLSGGLSVLSDVYVV
STLRLPAKLGGVLLGLYSKQDNRKYLEVAIMGKINKVLVRYVRADGKLHTVNLQNANLAD
GRTHSIILRLGGLHRDNVNMELYVNCRLVDSSQGLPPLVPLPREVDMVEIRHGQKAYARL
QGAVESLRLALGGSVANAGVLTDCPFQGDSSAYNSVGGDVNSILGEHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCYKGVSCVDSLQYPGYSC
GPCPPGTSGNGTHCEDVDECELQPCFSPGACVNSPGGFSCRSCPPGLWGAPLVGTGLDYA
KTHRQECVDVDECVDLPDACVSNSVCINTMGSYKCGGCKPGFLGNQTSGCFPRKSCAALT
FNPCDTNAHCTMERNGEVTCRCNVGWAGNGNTCGMDTDIDGYPDRSLPCVDNDKHCKQDN
CVFTPNSGQEDADNDGIGDRCDEDADGDGIINVMDNCRLVPNRDQQNSDSDSFGDACDNC
PNVPNSDQRDTDGNGQGDACDQDVDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNQDTDGDGLQDTRDNCPDVPNSSQLDSDNDGLGDDCDHD
DDNDGVLDDHDNCRLIVNPNQKDSDMNGVGDVCENDFDNDAVMDLIDVCPESAEVTLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHINTV
TDDDYAGFIFGYQDSSSFYVVMWKQTQQTYWQSNPFKATAQPALQLKAVKSRTGPGEFLR
NALWHTGDTPGEVKLLWKDPRNVGWKDKTSYRWQLSHRPQVGYIRVKLFEGSDMVADSGV
VIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDSVPEDFQYHRKQVLMHIHV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagcgtcccggtgctgctgtcgctcctctgtgtccggctcacgacgggagtc
ccggacgggccggatgctcaagtgatcgacgtgttgagccttcaggactcgaggcagagc
gtcgcggcggtggagaagctgtctggcggtctgagcgtgctcagtgacgtgtatgtggtg
tcaacgttgcggctgccggcgaagctgggcggagtcctgctgggtctctacagcaaacag
gacaacaggaagtacctggaggtcgccatcatggggaagatcaataaagtcttggttcgt
tacgtccgagccgacgggaagctccacaccgtcaacctgcagaacgccaacctggccgac
ggccggacgcactccatcatcctgagacttggaggtcttcaccgcgacaacgtgaacatg
gagctctacgtcaactgccgactggtggattccagccagggcctgccgccattggttcct
ctgccccgagaggtggacatggtggagatcagacacggacagaaggcctacgcccgactc
cagggagcagtggagtccctcagactggctctagggggcagtgtggctaacgctggagtt
ctgaccgactgtccgttccaaggagactcctccgcctacaactcagtgggcggggacgtg
aactccatcctgggtgagcacaccaaggctctgattggtcagctcatcatcttcaaccag
atcctgggagagctgcgacaggacatcagagaacaggtgaaggagatgtccctgatcaga
aacaccatcctggagtgtcaggtttgtggtttccatgagccccggtcccgttgttctcct
aacccgtgttataaaggtgtgtcctgtgtggacagtcttcagtatcctggttacagctgt
ggaccgtgtcccccggggaccagtgggaacgggacgcactgtgaggacgtggatgagtgt
gagctgcagccatgtttctctcctggagcctgtgtaaactcacctggaggcttcagctgc
cggtcgtgtcctccaggcctgtggggggcgccactggtcgggacgggcctggactacgcc
aagacacacagacaggagtgtgtggacgtcgatgagtgtgtggacctgcccgacgcctgt
gtgtcaaactccgtctgcatcaacaccatgggttcctacaagtgtggcggctgtaaaccc
ggtttcctcggcaaccagacatcaggatgcttccccaggaagtcgtgtgctgcgttgacc
tttaacccctgtgacaccaacgcccactgcaccatggagaggaacggggaggtgacctgc
aggtgtaatgtgggctgggcaggtaacgggaacacgtgtggcatggacacggacatcgac
gggtaccccgaccgctcgctgccctgcgtggacaacgacaaacactgtaaacaggacaac
tgtgtgttcacccccaactctggtcaggaggacgccgacaacgacgggatcggagatcgt
tgtgacgaggacgcagacggagacggcatcataaacgtgatggacaactgccggctggtc
ccgaacagagaccagcagaactcggacagcgactcgtttggagacgcctgcgacaactgt
cccaacgtccccaacagcgaccagagagacacagatggcaacggacagggagacgcctgc
gaccaggatgtggacggagacgggattcccaacgttcttgacaactgtccaaaggttccg
aacccgatgcagacggacagagaccgggacggcgtgggagacgcctgtgacagttgtcct
gagctcagtaaccccatgcagacggacgtcgacaacgacctggtgggagacgtgtgtgac
accaaccaagacacggacggagacggtctccaggacaccagagacaactgtcctgacgtc
cccaacagttctcagctggactctgacaacgacggcctcggagacgactgtgaccatgac
gacgacaacgacggtgtcctcgacgaccacgacaactgtcgactcattgtcaaccccaac
cagaaagactccgacatgaatggcgtgggagacgtctgtgagaacgactttgataacgac
gccgtgatggatttgattgacgtgtgtccagagagcgccgaggtcacactgacggacttc
agagcctatcagacggttgtccttgacccggagggcgacgcccagatcgaccccaactgg
gtggtgctgaaccaggggatggagattgtccagacgatgaacagcgaccccggtctcgcc
gtgggctacaccgcgtttaacggcgtcgacttcgagggaacctttcacatcaacacggtg
acggacgacgactacgccggcttcatctttggttaccaggactcgtcgagtttctacgtg
gtgatgtggaagcagacgcagcagacgtactggcagtccaaccccttcaaggccacggcc
cagcccgccctgcagctcaaggcggtgaagtctcgaaccggaccaggtgagttcctgagg
aacgctctgtggcacactggagacacacctggagaggtgaagctgctctggaaggaccca
cggaacgtcggctggaaggacaaaacctcgtaccgctggcagctgagccaccggccgcag
gttgggtacatcagggtgaagctgttcgaggggagcgacatggtggccgactccggcgtc
gtgatcgacaccacgatgagaggaggccgactcggcgtcttctgcttctcccaggaaaac
atcatctggtccaacctgcgctacagatgtaatgactcggtgcctgaagacttccagtat
catcgtaaacaggttctgatgcacattcatgtctga
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