Scophthalmus maximus (turbot): 118285191
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Entry
118285191 CDS
T09850
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smau01100
Metabolic pathways
Module
smau_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118285191 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smau01003
]
118285191 (csgalnact1a)
Enzymes [BR:
smau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
118285191 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118285191 (csgalnact1a)
Glycosyltransferases [BR:
smau01003
]
Glycan extension
O-Glycan
118285191 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Sec8_N
ATG14
PEP-utilisers_N
DUF5320
Motif
Other DBs
NCBI-GeneID:
118285191
NCBI-ProteinID:
XP_035464558
UniProt:
A0A8D3A484
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Position
20:12440973..12470635
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AA seq
595 aa
AA seq
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MLNAAMLRRGLLTWVSRVGGVLVLFCCSLSLLYVMTCSPPHSDDPPLSHALPRAGSNHPS
QGGTRPGMGAGAGGTGGAGVGPAQSGRSPGVQSYQVLLQEREEQHRHHISSLKKEIAQLK
EALQERSQQLKGVQESLKRGAGGPAEGQEAGLGSQGGGLGDIQGAKSPQADLQEFLRSQM
SKAEVTAGIRLPSEYAVVAFESFTLQRVYQLEMGLTRHPEEKPVRRDKREELGEVLETAM
HSLNAPSSPKDSRGAAEKSQSSKVYAPSDFIEGITRTEKDKGTLYELTFRGESSNEFRRL
VLFRPFGPLMKVKNERVDTSDVPINIVVPLSRRTDKFKQFMQNFREVCVRQDGRVHLTVV
YFGREQMSEVRSTLENTSREVNFKNYTLLQLDEEFSRGRGLDVGARAWTGGNVLLFFCDV
DIYFTADFLNSCRLNTQPGKKVFYPVLFSQYNPTLIYGSLEHIPTVEQQLVIKKDTGFWR
DFGFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYVHSNLLVVRAPSRGLFHLWHEK
HCADELPPDQYRMCMQSKAMNEASHGQLGMLFFRQEIEAHLRKQKQQHNSSPKKT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatgcagcaatgttgcgccgtggactacttacctgggtgtcccgtgttggggga
gtgctggtgctcttctgctgctccctgtctctgctctatgtgatgacctgcagccctccg
cactccgatgacccgccgctgagtcatgcattaccccgtgctggatccaatcaccccagc
caggggggcacacggccggggatgggagcaggggctggggggacaggaggcgccggagtt
gggcccgctcaaagcggcagatcgccgggtgtccagtcataccaggtgctcctccaagag
cgcgaggagcagcaccgccaccacatctcctccctgaaaaaagagatagctcagctgaag
gaggctctgcaggagcgcagccagcagctgaaaggagtgcaggagagcctgaagagaggg
gccgggggcccggcagagggacaggaagccgggcttgggtcccagggaggtggtctcggg
gacattcaaggggccaagagcccgcaggctgatctccaggagttcctgaggagccagatg
tcaaaggcggaggtgaccgccggcatcaggctgcccagtgagtacgcggtggtggcgttt
gagagtttcaccctgcagagggtctaccagctggagatgggcctgacgcgtcaccctgag
gagaagccggtgaggagggacaagagagaggagctgggggaggtgctggagacggcgatg
cacagcctcaacgcaccttcatcgccgaaggacagcaggggagcggcagaaaagagtcag
agtagcaaagtttacgcaccatctgacttcatagaaggcatcactcgtacagagaaggac
aaagggacgctgtacgagctgaccttcagaggggagtcgagtaatgaattcagacgactg
gtcctgttccggccctttggaccgctgatgaaggtgaagaacgagagggtggacacgtcc
gacgtcccgatcaacatcgtcgtcccgctgtccaggcgcacggacaagttcaaacagttc
atgcagaacttcagggaagtctgtgtgcgtcaggacggccgggtccatctgacagtggtg
tatttcgggagagagcagatgagcgaggtccgcagcactctggagaacacgtccagggaa
gtcaattttaagaactacactctgctgcagctggacgaggagttttctcggggacgaggt
ctagacgtcggggcccgagcctggacgggaggcaacgtgctgctcttcttctgcgacgtg
gacatctacttcaccgcggacttcctcaacagctgccgactcaacacacagcccggtaaa
aaggttttctacccggtgttattcagccagtacaaccccactctgatctatggaagcctt
gaacacatcccaactgtggagcagcagctggtgatcaagaaagacacggggttctggagg
gatttcggcttcggcatgacctgccagtacaggtccgacttcatcaacataggaggtttt
gacatcgacatcaaaggctggggcggcgaggacgtccacctctacaggaagtacgtccac
agcaacctcctagtggtgcgagcgccgtcgcgaggcctgttccacctgtggcacgagaag
cactgcgccgacgagctcccgccggaccagtatcgcatgtgcatgcagtcgaaggccatg
aacgaggcctcgcacggccagctggggatgctgttcttcaggcaagagatcgaggctcac
ctccgcaaacagaaacagcagcacaactccagccccaagaaaacttga
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