Scophthalmus maximus (turbot): 118285196
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Entry
118285196 CDS
T09850
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118285196 (vldlr)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118285196 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
118285196
NCBI-ProteinID:
XP_035464565
LinkDB
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Position
20:complement(2024132..2051154)
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AA seq
869 aa
AA seq
DB search
MVRSAPGVPLLLLPVLTCLLRYSATVHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCSD
GSDENSCVKKTCAELDFVCQNGQCVPKRWHCDGEPDCEDGSDESLQICHMRTCRVNEFSC
GAGSTQCIPNFWKCDGENDCDSGEDEVNCGNVTCAPNEFTCASGRCISRNFVCNGEDDCG
DGSDEVECAPSSCGPSEFQCGNSTCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCS
SSEMQCRSGECIHKKWRCDGDPDCKDGSDEANCPVRTCGSDQFKCDDGNCIMGSRQCNGL
RDCADGSDEVNCKNSMLTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECSVN
ECLLNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYK
CECHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNAVALDADF
DQQMIFWADLGQKAIYSTVMDKRGDVGAHSKVIDNVQTPVGVAVDWIYKNLYWSDLGTKT
ISVSNFNGTKQKVLFSRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVA
TDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKILQSSDFLAHPFALTVFEDR
VFWTDGENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCSERGENGGCS
YMCLPAPQINKHSPKYSCVCPEGQELAADGLRCRPEHSTNAPSKDDGKAVTQPPPEANVS
TSIQLNSTARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEDD
LNIDITRHGANVGHTYPAISIVSQDDDLS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggtccggtccgccccgggagtcccgctgctgctgctgccggtgctaacatgcctcctc
cggtacagcgctaccgtccacggcacgaagacggaatgtgaggccagccagtttcagtgt
gggaacggccgctgcatcccgtccgtgtggcagtgtgacggagacgaggactgcagcgac
ggcagcgacgagaactcctgtgttaagaagacgtgtgccgagttggactttgtgtgtcag
aacggccagtgtgtcccgaagaggtggcactgcgatggggagccggactgcgaggacggg
tcggacgagagtctacaaatctgccacatgaggacgtgtcgcgtgaacgagttcagctgc
ggagccgggtccacccagtgtatccccaacttctggaagtgtgacggagagaacgactgt
gacagtggagaggacgaggtcaactgtggtaacgtcacctgtgccccgaatgagttcacg
tgtgccagcggtcgctgcatctcgcgcaacttcgtgtgcaatggcgaggacgactgcggc
gatggctcggacgaggtggagtgcgcgccgtcctcctgcggccccagcgagttccagtgc
ggcaactccacgtgcatcccggcgagctgggtgtgcgacgacgacgtcgactgccaggac
cagtcggacgagtctccgtctcgttgcggccgccacccgacaccgccggccaagtgctcg
tccagcgagatgcagtgtcgctccggagagtgtatccacaagaagtggaggtgcgacgga
gaccctgactgcaaggacggcagtgacgaggccaactgtcctgttcgcacctgtggatca
gatcagttcaagtgcgatgatggaaactgcatcatgggcagtcgacagtgtaacggactc
agagactgcgccgatggatccgatgaagtcaactgcaaaaacagtatgttgactcagtgt
aacggaccggagaagttcaagtgtcgcagcggcgagtgtatcgagatgagcaaagtgtgc
aacaaggcccgagactgtcccgactggagcgacgagccaatcaaggagtgcagcgtgaac
gagtgtctcctgaacaatggcggctgctcgcacatctgcaaagacatggtgatcggcttc
gagtgcgactgcacacctggactgcagctcatcgaccacaagacctgcggagacatcaac
gagtgtctgaacccgggcatctgcagtcagatctgcatcaacctgaagggaggatacaag
tgcgagtgccacaacggctaccagatggacccgaccaccggagtgtgtaaggctgtcggt
aaggagccctgcctgatcttcaccaaccgccgagacatccgacgtctgggcctggagagg
aaggagtacactcagatcgtggagcagcagaggaacgccgtggctctggacgcggacttt
gaccagcagatgatcttctgggccgatctgggccagaaggccatctacagcaccgtgatg
gacaagcggggcgacgtcggcgcccacagcaaagtgatcgacaacgtccagacgccggtg
ggcgtcgccgtggactggatctacaagaacctgtactggtccgacctcggcaccaaaacc
atctccgtgtccaacttcaacggcaccaagcagaaggttctgttcagccgaggcctcaaa
gaaccggcttccatcgccgtggatccgctgtcagggtttctgtactggtccgactggggc
gagccagccaagattgagaagtctggtatgaacggagtggacagacaggttctggtggcg
acagacattcagtggcctaatggaatcactctggatctgatcaaaggccggttgtactgg
gtcgactcaaagctgcacatgctctgtagcgtcgacctgaacggggacaacaggaagaag
atcctccagtcctccgacttcctggctcatcccttcgctctcaccgtgttcgaggatcga
gttttctggacggacggtgagaacgaggcgatctacggcgccaacaagttcaccggctcc
gacgtggtgacgctcgccagcaacctgaacgacccgcaggacatcatcgtctaccacgag
ctgatccagctgtcaggaaccaactggtgcagtgagcgaggagagaacggcggctgcagc
tacatgtgtctgccggcgccgcagatcaacaagcactcgcccaaatactcatgcgtgtgt
ccggagggacaggagctggctgccgacggcctccgctgccgacccgaacattctaccaac
gctccctcaaaggatgatgggaaggctgtaacacagccgcccccagaagccaacgtgagc
acgtcgatccagttgaactccacagccagaggctcggctgctgcctgggccatcctgccc
gtcttgctgctggcgatggcggcggcgggcgggtacctgatgtggagaaactggcagctg
aagaaccagaagagcatgaacttcgacaaccccgtctacctaaagaccacggaggacgac
ctcaacatcgacatcacccggcacggcgccaacgtgggccacacctaccctgcgatctcc
atcgtgagccaagacgacgacttgtcctga
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