Scophthalmus maximus (turbot): 118285275
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Entry
118285275 CDS
T09850
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118285275 (prdm1a)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118285275 (prdm1a)
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
zf-met
B129_C2H2-zf
zf-C2HE
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
118285275
NCBI-ProteinID:
XP_035464689
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Position
10:21869152..21882961
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AA seq
858 aa
AA seq
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MCGWDQSYTATSHSSAMLTSEGAHTMEQDDSHRGPKMASAATTAATGCSSARTEAMTDTD
VDMETEMEEADMTRWTEAEFEEKCTYIVKDTAWEAGPDGDAMMTTTTRAEASLPRNLALK
HPADSKEVVGVCSREYIPKGTRFGPLVGEIYTADSVPRDANRKYFWRIYAEREFHHFVDG
LDETRSNWMRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHY
PPSGEMMMQKLKQSLLEVKQQKVSSEERLVEASSPSPVAVTPTPPKREHSVLSILRGTNS
TSSSTKREPSRPLPTRPSCADSPERPLYPRALYPTFRAHPHVPEDFLCHKPGQLGYPATR
SPGNQSSATPSPSARSSPDSSPQGSPSGAVPSPASFYPTGLGSYPGYSPPSAPLSSSFYP
PGTPYSRYLLPHHYPLPGGGVPTVGGIFPRMYPLYSSLLPTHVPLLPSDTAGRRFLMPDH
IHPSSISAHRDFLLPGPTSAFSAATSLKDKAGPHHPYPGHPNLHEPAHVPSSGSPTAGTA
PPSERMPTKPTSALPGNASEQHSDEEAINLTKVKRGIGSAGYKALPYPLKKQNGKIKYEC
NVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCR
KRFSSTSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRDRPHKCLHCHRHYI
HLCSLRLHLKGYCLAASPGSGNPAVSSQAALEEVQRANEEIERFDVSEHAERLEQLQGGV
EVEAMLEKQVLGMLWREADLKSSHFHPLHKGVATELLSAGYGAYESPNETSVIKMRRSSP
MLPLPANVTVKQESEDHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagttacacggcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgactcgcaccgcggacccaagatggcctccgcc
gccaccactgccgccactggctgcagctcagccaggaccgaggcaatgacagacacagac
gttgacatggagacggagatggaggaggcagacatgactcgatggaccgaggcggagttt
gaggagaagtgcacatacattgtcaaagacacggcatgggaggctggcccagacggtgac
gccatgatgacgacgacaaccagagccgaggcgtcactgccccggaacctggccttaaag
cacccagctgacagcaaggaggtggtcggcgtgtgcagcagggagtacatccccaaagga
actcgcttcggtcccctggtgggcgaaatctacacagctgacagcgtccccagagacgcc
aaccgcaagtacttctggaggatctacgcggaaagggagttccatcacttcgtcgacggc
ctggatgagactcgctctaactggatgcggtacgtgaacccggcccactcggcggcggag
cagaatctggcagcgtgtcagaacggcatggagatttatttctacacggtgaagcccgtt
cctgccggcgctgagctgctcgtctggtactgccacgactttgcccgacgactccactac
ccgccgtcaggagagatgatgatgcagaaactcaagcaatctctcttggaggtcaagcag
cagaaagtgagcagtgaagagcgtttggtcgaagcctccagtccgtcccccgtcgcagtg
acacccaccccgcccaagagggaacacagcgtcctctccattctgcgtggcaccaacagc
acctcctcgtccacaaagagggagcccagccggccgcttcccacccgcccgagctgtgcc
gacagccctgagcgccccctgtacccccgcgccctctacccaactttcagggcccaccct
cacgtccctgaagacttcctttgccacaaacctggccagctcggttaccccgcaactcgt
tcccctggcaaccaatcctcggccacacctagcccgtcagcgaggagcagcccggacagc
agccctcaggggagtccctcgggtgcggtgccgtccccagcttctttctaccccactgga
ctgggctcctaccctggttactccccaccatcagcccccctttcctcatctttttaccct
ccaggaaccccctactcacgatacctactgccccatcactatcctctgcccggcggtggc
gtccccaccgtaggagggatctttcccaggatgtatcccctctacagcagcctcctgccc
actcacgtgcccctcctgccctccgacacagcagggaggcgcttcctgatgcctgatcac
atccacccctcctccatttctgcacacagagacttcctcctacccgggcccaccagtgct
ttctcagccgccacctcactgaaggacaaagccgggcctcaccatccttaccccgggcac
cctaacctacacgaaccagcccacgtcccctccagcggctccccaacagcaggcacagca
cctcccagcgagcggatgcctaccaagcctacctcagccctgccgggcaacgccagtgag
caacactccgacgaggaggccatcaacttgaccaaagtaaaacgaggcataggctcggcg
ggctacaaagcacttccatacccgctgaagaagcagaacggcaaaatcaagtacgagtgt
aacgtgtgcagcaagacctttgggcagctgtccaacctgaaggttcatcttcgtgtccac
agtggagagagaccctttaaatgtcagacctgtaacaaaggcttcacccagctggctcac
ctgcagaaacacttcctggtccacactggggagaagccgcatgaatgtcaggtttgccgc
aagcgcttcagcagcaccagcaacctgaaaacccaccttcgcctccactcaggcgagaag
ccttaccactgcaaactctgcccagccaagttcacccagtttgtccacctcaagctgcac
aagcgcctgcactcccgggaccgtccacacaaatgccttcactgccaccgccactacatc
cacctgtgcagcctgcggcttcacctgaagggctactgcctggcagccagccctggctct
ggcaatccggcggtgtctagtcaggctgccttggaggaggtgcaacgcgccaacgaagag
atcgagcgcttcgacgtcagcgagcatgccgagcggctggagcagctgcagggtggggtg
gaggtggaggccatgttggagaagcaggtcctggggatgctgtggagggaggcagacctc
aagtcctcccacttccatcccctccacaagggggtcgccactgagcttctgtctgcaggt
tacggcgcgtacgagtccccgaatgagacgtcggtcatcaagatgcggcgcagcagcccc
atgctgccacttcctgccaacgtcacagtcaagcaggagtcagaggatcacgcctaa
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