Scophthalmus maximus (turbot): 118285329
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Entry
118285329 CDS
T09850
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118285329 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118285329 (dcc)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
DCC/UNC5 family
118285329 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Ig_Rha78A_N
Fn3_VIN3
fn3_SORL1
Interfer-bind
C2-set_2
C2-set_3
Ig_5
Ig_4
Sp38
Protocadherin
EphA2_TM
V-set_CD47
Ig_PDGFR_d4
Arylsulfotran_N
GH101_dom-5
FAM176
Orf78
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
118285329
NCBI-ProteinID:
XP_035464803
LinkDB
All DBs
Position
20:1158337..1313738
Genome browser
AA seq
1512 aa
AA seq
DB search
MELVSLGCRIAGGWEEVLVLRRRRRRRRTGGLHLLLPVMLCWLLAAHSAAHASDASTSSS
SSSSGLGGFVDFTFTQEPQDTVTVRGGVLQLDCQAQCDVATGPVAITWRKDGVLLSAVVD
DRRRQLTNGSLLVQNVVHSRHHRPDEGEYQCLATVDGLGSIVSRTAKVTVAGPLKVVVPT
ESVSSYLGDTALLRCEVSGDPTPVIRWQKNREDLPTNLDPDSRLAALPSGSLQVSRVQPP
DSATYRCLADNPGSTRTGTDGELRVLPEPGVSRNLQFLQRPSRVAALLGTDAVLECSASG
YPTPSVQWTRGDEQIQSWNKKYSLLAGSNLIIRSVTDDDSGVYSCAAANKNQNITAQAEL
SVLVPPQFLNYPTNTLAYESTDIELECAVTGNPPPTVRWTKNGEEVIPSDYFQIVDGSNL
QILGLVKSDEGFYQCVAENSAGSSQAMAQLLLREPVSPSPGVVLPSAPRDLVPVLVSSRF
VRLSWRPPEESGGAVQTYGVYYSQDAVERERSVNVSEPESLELTVSNLKPEESYSFRVVA
YNDVGPGESSAPLRITTKPDLQVPSRVESLRADALSPTSVQVSWEPPVQPNGPLLGYRLL
WSESPTGKEQSVEVNGLNYKMEGLNKFTEYTVRVLAINRYGPGTATEPVGVTTQSDVPSA
APQNITLEVVLSRSIKVSWQPPLRSGQNGVITAYKIKYRKTGRRGDQEAIEPNNFWYLFT
GLEKGSQYSFQVAAMTANGTGPASDWFTAETPENDLDESQVPDQPSSLHVRPLPNSIIMS
WTPPLSPSILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGE
GVPLYESAVTRSLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVALSSDSVRV
SWADNSMTKNQKSSEVRYYSVKWKTSYSTSGKYKSADTTALSHTVTGLKPNTMYEFAVMV
TKGRKSSTWSMTAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANGRITGYIL
YYTLDKNMPIDDWVMEAISGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSEPVHFRTA
KVEHPDKMANDQGRGGEHTYWPSDNNLIDKSSINESPIGQMRPPHGSATPQKNSNLLVII
VVSVGAVTVVVVVIVALICTRRSSAQQRKKRASHGASKRKGSQKDLRPPDLWIHHEEMEM
KNMEKAPSVAPSGRNSPTQSCQDLPQVAHSQSGSQIGSKSSHSVDGDEASSSISTLERSL
AARRGTRGKMMIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCSFTHNKFSLRPMPF
PSLTVDRGYTPAMSSDASVNPLLQQQPPPQQAPPLLPGSSASLVEHGPGVGPVPGAPAAV
VASAEEAQAASGRTIPTACVRPSHPLRSFTNPLLPPPMGTIDPKVYTSMMPQSSASLPKP
QVKTASLGQAGKARSPLLPVSVPTAPDLPEEGGTKSAEDSAANVYEQDDLSEQMASLEGL
MKQLNAITGSAF
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggagctggtgtcgcttggatgtaggatcgctggaggctgggaggaggtcctggtgctg
aggaggaggaggaggaggaggaggaccggaggactccacctgctgctgccggtgatgctc
tgctggctgctggcggcgcacagcgctgcgcacgcctcggacgcctccacatcttcctcc
tcgtcgtcgtctggtctcggagggttcgtggacttcaccttcacgcaggagcctcaggac
acggtgacggtgcgaggcggcgtgctgcagctcgactgccaggctcagtgcgacgtggcg
acgggacctgtcgccatcacgtggcgcaaggacggcgtgctgctgagcgccgtggtggac
gaccggcggcggcagctgaccaacggctcgctgctggtgcagaacgtggtgcactcgcgg
caccaccggcccgacgagggggagtaccagtgcctcgccacagtggacgggctgggcagc
atcgtgagtcggaccgccaaggtcacagtggccggtccactgaaggtggtcgtccccacc
gagtccgtgtcctcgtacctgggcgacacggccctgctgcgctgcgaggtgtccggcgac
ccgacgcccgtcatccgctggcagaagaaccgggaggacctgcccaccaacttggacccg
gactcccgcctggcggcgctgccgtccggctcgctgcaggtcagccgcgtccagccgccg
gactccgccacgtaccgctgcctggccgacaaccccggcagcaccaggacggggacggac
ggcgagctccgcgtgctcccagaacccggcgtgagcaggaacctccagttcctccagcgt
ccgtcccgagtggcggctctgctgggaaccgacgccgtgctggagtgttccgcctccggt
tacccgactcccagcgtccagtggacgagaggcgacgagcagatccagagctggaacaag
aagtactccctgctggcgggcagtaacctgatcatccgcagcgtcaccgacgacgactcc
ggcgtctacagctgcgcggccgccaacaagaaccagaacatcacggcccaggcggagctc
agtgtgctggttcctcctcagttcctcaactacccgaccaacacgttggcctacgagtcg
accgacatcgagctggagtgcgccgtgacggggaacccgccgccgaccgtccgctggacc
aagaacggagaggaagtcattcccagcgactacttccagatcgtggacggcagcaacctg
cagatcctgggtctggtgaagtcagacgaaggattctatcagtgcgtcgctgagaactca
gccggcagctcgcaggcgatggctcagctgctgctccgagagccagtgtcccccagccca
ggcgttgtcctcccctctgccccccgcgacctggtccctgtcctagtgtccagtcgattt
gtccgactcagctggcgccccccggaggagagcggaggagctgtgcagacctacggcgtt
tattactcccaggacgcagtcgagagggagcggtcagtgaacgtgtcggagcccgagtcg
ttggagttgacggtgtccaacctgaagcccgaggagagctacagcttcagggtcgtcgcc
tacaacgacgtgggccccggcgagagctccgcccccctgaggatcaccaccaagcccgac
ctccaggttcccagcagggtggagtccctccgagccgacgctctgtcccccacctcggtc
caggtgagctgggagcctccggtccaacccaacggccccctgctgggctacaggctgctg
tggagcgagagcccgaccggcaaggagcagagtgtggaagtgaacggcctgaactacaaa
atggaggggctcaacaagttcacggagtacacggtgcgggttctggccatcaaccgctac
ggaccgggcacggccaccgagccggtcggcgtcaccacccaatcagacgttcccagtgcg
gctcctcagaacatcaccttggaggtcgtcctgtcccggagcatcaaggtttcgtggcag
ccgcctctgcgcagcggccagaacggcgtcatcaccgcctacaagatcaagtacaggaag
acaggtcgccgtggagaccaggaggccatcgagcccaacaacttctggtacctgttcaca
ggtctggagaaaggcagtcagtacagtttccaggtagcagccatgacggccaatggaaca
ggtccagccagcgactggttcaccgctgagacgccggagaacgacctggacgagagtcag
gttcccgaccagcccagctctctgcacgtcaggccgctgcccaacagcatcatcatgtcc
tggactccgcccctcagccccagcatcctggtccgcggctacatcatcggctacggggtg
gggagcccctacgccgagacggtccgggtggacagcaagcagagatactactccattgaa
aacctggaacctagttcgcactacgtgatttccctgaaggcgttcaacaacgccggagag
ggcgttcccctgtacgagagcgccgtcactcgatccctgacagaccccatagacccatcc
gaggacgaccttttccacctctttgataaataccccactcccatgccagacaccagcact
cccatgatccccccggtgggggtccaggccgtggccctgtcctcggactcggttcgcgtc
tcctgggccgacaactccatgaccaagaaccagaagtcgtctgaggtgcggtactactcc
gtcaagtggaagaccagctactccaccagcgggaagtacaagtccgcagacaccacggct
ctcagccacaccgtcaccggcctaaagcccaacaccatgtacgagtttgccgtcatggtg
accaaaggccgcaagtccagcacgtggagcatgacggcacacgccacgacgtacgaagca
gctcctagctccgcccccaaagacctgacggtgatcagtcgcgagggacgaccccgcgcc
attttaatcagctggcagccgccgatggaggccaacggacgaatcacaggctacatcctg
tactacacgctggataagaacatgcccatagacgactgggtgatggaggcgatcagcggc
gaccggctgacgcaccaggtcgtggatctgaacctggacacggtttattacttcaggatt
caggccaagaacgccaagggggtcgggccgctgtccgagcccgtccacttcaggaccgcc
aaagtggaacatccggacaagatggctaatgatcaaggtcgagggggagaacacacctac
tggccgtctgacaacaacctgatcgacaagagcagcatcaacgagtctcccatcggtcag
atgcgtccgccccacggcagcgccacgccgcagaagaacagcaacctgctggtcatcatc
gtggtctcggtgggagccgtcacggtggtcgtggtcgtcatcgtggcgctcatctgcacc
cgccgctcctcggcccagcagaggaagaagcgagcgagccacggcgccagcaagaggaag
ggcagccagaaggacctgcggccccccgacctgtggatccaccacgaggagatggagatg
aagaacatggagaaggcgccgagcgtcgccccgtccggacgcaactcgcccacgcagtcg
tgccaggacctgccgcaggtcgctcacagccaatcggggagccagatcggcagcaagagc
agccactcagtggacggcgacgaggcgtccagcagcatctccactctggagcgctccctg
gctgccaggaggggaacgcgaggcaaaatgatgattcctatggactcgcagccgagcaac
acaccggtggtcagtgccatcccggtgccggctctggactcctctcagtatcccgggatt
ctgccgtcgccctcctgcagcttcacgcacaacaagttcagcctgagaccgatgccgttc
cccagcctgacggtggacagaggatacactccagcgatgtcatcggacgcctccgtcaac
cctctcctccagcagcagcctccgccacagcaggccccgcccctcctccccggctcctcc
gcctcgctcgtggagcacggcccgggggtcggcccggtcccgggcgctcccgcagctgtg
gtcgcctccgccgaggaggcccaggcggcgagcggtcgcaccatccccacggcctgcgtg
cggcccagccacccgctgcggagcttcaccaacccgctgctgcctccgcccatgggcacc
atcgaccccaaggtctacacctccatgatgccgcagtccagtgcgagcctcccgaagccc
caggtgaagacggcgtctctgggtcaggccggcaaggctcgctcccccctgctgcccgtc
tccgtccccacggcgcccgacctaccggaggagggaggaacaaagtccgccgaggactcg
gccgccaacgtgtacgagcaggacgacctgtcggagcagatggccagtctagaaggactg
atgaagcagctcaacgccatcaccggctccgccttctaa
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