Scophthalmus maximus (turbot): 118285410
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Entry
118285410 CDS
T09850
Symbol
bcan
Name
(RefSeq) brevican core protein isoform X1
KO
K06795
brevican
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smau00535
]
118285410 (bcan)
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118285410 (bcan)
04091 Lectins [BR:
smau04091
]
118285410 (bcan)
Proteoglycans [BR:
smau00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
118285410 (bcan)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
118285410 (bcan)
Lectins [BR:
smau04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
118285410 (bcan)
BRITE hierarchy
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
YecM
ig
EGF_2
Motif
Other DBs
NCBI-GeneID:
118285410
NCBI-ProteinID:
XP_035464940
EnsemblRapid:
ENSSMAG00025001784
LinkDB
All DBs
Position
10:complement(22507709..22529586)
Genome browser
AA seq
1296 aa
AA seq
DB search
MKMKLVVPLPVLLCAICLLVLPSSSTPHHDSDDSKLLHVTILTTPPVLAVLGGSLTLPCL
VSLAHPPPSPSTNGRHAVLSLPRVKWSVLTNGHEAEILVARGDRVRVSEAYKDRATLLNY
AFSPADLTLRLESLRQNDTGFYRCEVQQGLEDADDMAQVKVKGVVFHYRDASSRYAFTFA
QAREACKEVGAEIATPEQLLAAYHSGYEQCDAGWLSDHSVRYPIQMPREGCFGDMDGLPG
VRNYGLLEPDELYDTYCYVEDNEGEVFHGSAPQRFTFWEAKTFCLSHGAELATTAQLYAA
WNDGLNHCSPGWLVDGSVRYPIVTPRERCGGGEPGVRTIYRYSNQTGFPHSHTRHDVYCF
RSPKAQETGDSRNRLGEYHRNHITGNNVPYTESPQDFLATEPEDIVFLTNSAQEAVTFSE
VTAMRGEDVQHAQTVSPVQQAPVQAQSPTLCYDKEPLLSVDLHQSLQTPLPEHQQHTTIE
DTWEPVEKARYPESYRPAPDENPLTDHEDSHVHPTSSNADGVVPTGKDSSLPTIDGTSSG
TREPPESHNSNNNPETQTQDSLGVNATSGVDVKELLNSSSEVHQKVELPVSQEDHTPDDH
WEHVSESELVYSSTSYDISEQTEEASTGNVERVSAVTTSLHAEESDVPATAPPVNHPTVE
CGEESASLPLDEGIQDPVTQSLIGLDISTISELVPTSDSSYDPPQEQSGIMIESSIPVDR
GGEENKSAPDEADPIEQSGNIHLTEITAAELITVTDDSTVDSPVLNNNPMTLLTPGTLSP
PSMEVISSSPEIITSMPKCNASSGADIQEHTEEEGLEESQEAFFSTTQNITYSDPERRER
GARDGSDESSGESPVLKPELLLTNPTVSADHTSEGTDGEAGTGAPPHSNVKITLILHRTL
TPGWEPEPSSSTLQESRSDREYSAETPVAQETDEVMAVITTRSINGHGLDVAAEAETGTD
ENSGPTLTTDSHDVTVAAPTMYPEEFKQDEEDQEQGAMAAQPGAVSDSCLENPCLNGGTC
VDGGSTRCICLPGYGGDLCQTDPEVCEPGWEKFQGFCYRHFSKRQSWEAAEQHCRMCGGH
LISVMTPEEQEDINGKTWKPKKENCTSSCDQGAKRARLYKYREYQWIGLNDRTIEGDFRW
SDGNPLLYENWYKGQPDSYFLSGEDCAVMVWHDGGQWSDVPCNYHLSYTCKKGVSSCGEP
PQVPFAKVFGKKHSRYETNTKVRYYCEEGFVQKLNPVITCLPSGQWEEPQITCMPPHSMG
QDSVTLLPHQHEEVIEVMSTATDKATPLFSDIKWNL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaactggttgtgcctctacctgtgctgctgtgtgccatctgcctccttgtc
ctgccatcgtcctctaccccccaccatgactcagatgattcaaagcttctccacgtcact
atcctcaccacccccccagtgttggccgtgctgggcggctctctgacgttaccctgccta
gtgtctctggcccaccctccaccatccccctccaccaacggccgccacgccgtgctctct
ctcccccgggtcaagtggagtgtgctaactaatggccatgaggcagagatcctggtggcc
cgtggggacagggtgagagtcagtgaggcctacaaagacagagcgacgctgctcaactat
gccttctcccccgccgacctcaccttgcgcctggaaagtctgagacagaatgacaccggc
ttctaccgctgcgaggtgcaacagggcctggaggatgctgacgacatggctcaggtcaag
gtcaaaggtgtggtgtttcattatcgtgatgcatccagccggtacgcgtttaccttcgcg
caggccagagaggcctgtaaggaggttggcgctgaaatcgccactccagagcagctactg
gctgcctaccacagtggatacgagcagtgtgatgcaggctggctgtcagaccactcagtg
agatatcccattcagatgccgagagagggctgttttggggatatggatggactgccagga
gtgaggaactatggactgctggagcctgatgagctgtatgacacctattgctatgtggag
gataatgagggtgaggtattccatggctccgccccccagcgtttcaccttctgggaggcc
aagaccttttgtctgagtcacggggcagagctggccaccacagctcagctatatgcagcc
tggaatgatggactgaaccactgcagtccagggtggctggtggacggcagtgtgcgctac
cccatcgtcacccccagagagcgctgtggaggtggtgaacctggagtcagaaccatctat
cgctacagcaaccagacaggcttccctcactctcacacacgacatgatgtctactgcttc
agaagccccaaggcacaggagacaggagacagcaggaacagactgggggaatatcacagg
aaccacatcacaggcaataacgtcccttacaccgaatcgcctcaggattttctcgccact
gagccagaggacattgttttcttgactaattctgctcaggaagcggttacctttagtgag
gtgacagcaatgaggggtgaagacgtgcagcatgcccagacggtcagtcctgtgcaacaa
gcccctgtgcaggctcagtccccgacactgtgttacgacaaggagccgttgctctcagtg
gaccttcatcagtctctgcagactcctctgcctgagcatcaacagcacactaccatagaa
gatacctgggagcctgtggagaaggcaagatacccagagtcctatagaccagcacctgac
gaaaatcctctgacagatcatgaagattctcacgtacatccaacatcttctaatgctgat
ggcgtagtaccaactggtaaagactccagtttacccacaattgatgggacaagttcagga
accagagagcccccagagtctcataattctaacaataacccagagactcaaacccaggat
tcgctaggtgttaatgcaacatctggagttgacgtaaaggagcttctcaatagttcttca
gaggtgcatcagaaggttgagcttcccgtttcccaagaggatcacactccagatgaccac
tgggaacatgtctctgaatctgagctggtctactcaagcacttcttacgatatttctgag
cagacagaagaggccagcactggtaatgttgagagggtatcagcagtgactacttccctc
cacgctgaagaatcagatgttcccgccactgcaccacctgtgaaccacccaacagtggag
tgtggagaggagagtgcaagtcttcctctagatgagggaatacaagacccagtaacccag
agtttgattggcttggacatctctaccatttctgaactggtccctacctctgattcaagt
tatgatcctcctcaagagcaatcaggaatcatgattgagtcgtccatcccagttgaccgt
ggtggcgaggagaacaaaagcgctccggacgaggccgatccaatagagcagagtggaaac
atccatctcactgaaatcacagcagcagagctcattacagtcactgatgactccactgtg
gattctcctgtcctaaacaacaatcctatgactttgttgacacctggaaccctgtctccc
ccttctatggaggttatatctagctccccagagatcattacctccatgcccaaatgcaat
gcttcatctggggccgacatccaggaacatactgaagaggagggattagaagaaagtcaa
gaagcatttttcagcacaacgcaaaatatcacatacagtgacccagagaggagggaacga
ggtgccagagatggatcagatgaatcgtcaggagaaagcccagtgttgaaaccagaactt
ctgttgacaaaccctactgtctcagcagaccacacctctgagggaactgatggtgaggcc
ggcactggtgcacctcctcattcaaatgtaaaaatcaccctgatccttcatcggaccctc
acgcccggctgggaacccgagccttcctcctccacgctgcaggagtctcgctctgaccga
gaatacagtgcagagactcccgttgcccaggaaactgatgaggtcatggcggtgatcacc
accaggagcatcaatggacatggattagacgtggcagctgaggcggagaccggcacagac
gagaactctggtccaactctcaccacagacagtcatgatgtgaccgtcgctgctcccacc
atgtacccagaggaatttaaacaagatgaggaggaccaggaacagggagccatggctgca
cagccaggagccgtctcagactcctgccttgagaacccttgcttgaatggaggcacttgt
gtcgatggtggatcgaccaggtgcatttgtttgcccggttacggaggagacttgtgccag
acagaccctgaggtgtgcgagccgggctgggagaagtttcagggcttctgttaccgtcat
tttagcaagaggcagagttgggaggcggctgagcagcactgtcgcatgtgtggtggacac
ctgatctccgtcatgacccccgaggagcaggaggacatcaacggtaaaacttggaaaccc
aagaaagaaaattgcacaagttcttgcgaccaaggagcaaaaagagccagattgtacaaa
tacagagaatatcagtggatcggactaaatgacagaaccatagagggagacttccgctgg
tcagacgggaaccctctgctctatgagaactggtacaaaggccagcctgacagctacttc
ctgtccggtgaggactgtgcggtgatggtgtggcacgacggcggccagtggagcgatgta
ccgtgcaactaccacctatcctacacctgcaaaaagggtgtctcctcctgtggcgagccc
ccacaggttccctttgctaaagtgtttgggaagaagcattcacgttacgagaccaacacc
aaggtgcggtactactgtgaagagggttttgttcagaaactgaatcctgtcattacgtgc
ctgcccagcggccaatgggaggagcctcagattacctgcatgccacctcactcaatggga
caagactctgttaccttactgcctcaccagcatgaggaggtcatcgaggtcatgagtaca
gcaacggataaagcaacgccgctgttctcggacattaagtggaatttgtaa
DBGET
integrated database retrieval system
