Scophthalmus maximus (turbot): 118285439
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Entry
118285439 CDS
T09850
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118285439 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118285439 (myo5b)
04131 Membrane trafficking [BR:
smau04131
]
118285439 (myo5b)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118285439 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118285439 (myo5b)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118285439 (myo5b)
mRNA cycle factors
P-body specific factors
118285439 (myo5b)
Membrane trafficking [BR:
smau04131
]
Others
Actin-binding proteins
Myosins
118285439 (myo5b)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118285439 (myo5b)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118285439 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
118285439
NCBI-ProteinID:
XP_035465000
LinkDB
All DBs
Position
20:complement(160737..181921)
Genome browser
AA seq
1840 aa
AA seq
DB search
MTSDYYPYSQFTRVWIPDPDDVWAAAEITRDYKEGESLLHLKLEDETPLDYPVGQKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRNFHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASATLPEFKDLGLTSAEAFTYTSLGENIFIEGV
NDAEDLKKTREAFTLLGVKENSQSNIFKIMASILHLGNVEICSERDGESCHISKDDPHLQ
HFCRLLGVELQQMEQWLCRRKLATSSETYVKTMSSKQATNARDALAKHIYARMFDWIVEH
INMSLQTSAKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGVLDLLDEECKVPKGTDLNWAQKLYTQHGSRDQFQ
KPRMSNSSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHEKGDAP
SSKSSRVNVRPAKPTPRGPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDVKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMRKSDVTSSDKKQVC
KNLLEILIKDPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYQ
KIQRLAVTLQRYGRGYLARRHAEFLRRTRAALVCQKQFRMVRDRRAFLRVRQAVVTIQAH
ARGMFTRRIYWEFLLHHKAMIIQRCVRGWLQRKKFRRARNAAIIIQCGFRRTHAKKELKQ
LKIEARSAQHLKNLNSGMENKIVQLQRKIDDQSKELRTQNEQLKVVNVGLGSEVNKLQKQ
LEQVRGQRGDSGQLTSLQEELERLRAELQEAHAHRKRLEEEHGSEKLDLQQRVKELETEN
SLLKSEKEELNQRIRQKEKISAEDGSSREVSLQKELDLERQRYQNQLKEFSRLEQRCENL
KEELSLSKFHPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDAVQLVEELGVEKAAMDIS
LFMKLQKRVRELEQERKRLQSSVDKMEEVTKRRGSEAKSPTSERETADLAYDNLKRQELE
SENKKLKNDLNVLRKSISERAAQNNSSNELQDGYNVLLSQLRAANEELDARKEEVIILKT
QIVSNAQRQEMNQQQQSNNVPGVPEIPEDKDEAVRAYQGLTEAKRQQDSWYVNEDGELSL
AYQGLKQVARLLEAQLQSQTRQHSDELEALHTQIELLKLDIEKKQEILNYTSSLSPEAQV
EFSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQAAALSRRSRP
ELSRQVTVQRKEKDFEGMLEFYKEDEALLVKTLITDMKPGSVSATVPCLPAYILFMCIRH
ADYVNDDQKVESLLTSAINAIKKVLKKNSEDFETTSFWLANTSRLLHCLKQYSGDEAFMT
QNTSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVSEGTIQPMIVSAMLESESIPSLA
GVKPMGYRNRSSSMDTEGGGPSSYTLEALIRQLGQFHSIMRDHGLDPEIVGQVVRQLFHC
INAVTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWLRANNLYQSKAAATLESIIQAAQLLQ
VKKKTSQDAEAICSLCSALTTQQIVKVLNLYTPLNEFEERVTVSFIRTIQNRLQERNDPL
QLLVDTKHTFPVLFPYTPSALSLETLHIPASLGLDFLIRV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgattattacccgtactcgcagttcacccgggtttggatcccggaccctgac
gatgtgtgggccgccgcagagatcaccagagattataaagagggagagtcgcttcttcac
ctcaagctggaggatgaaacgcctctggattatcccgtcggtcagaagagtaaccctctt
cctttcctgcgtaaccccgacatcctggtgggagagaacgacctcaccgccctcagttac
ctgcatgaacctgccgtcctgcacaacctgcgagttcgcttcctcgagtccaaccacatc
tacacgtactgcgggatcgtactggtcgccatcaacccgtacgagcagctgcagatttat
ggcgaggaggtcatcaacgcctacagcggacagaacatgggcgacatggaccctcacata
ttcgctgtggctgaagaggcgtacaagcagatggggagagacgagaggaatcagtccatc
atcgtcagcggagaatccggagcagggaagacggtttctgcgaagtacgccatgcgtttc
tttgccacagtcggaggttcagccaacgacacgaacgtggaggagaaggtgctcgcatcc
agccccatcatggaggccattggaaacgccaaaaccacccggaatgacaacagcagtcgc
tttggaaagtacatccagatcggtttcagccgaaacttccacatcatcggggccaacatg
cggacgtacctgctggagaagtctcgtgtggtgttccaggcggaggatgagaggaactat
cacatcttctatcagctctgcgcctcggccactttaccagagttcaaagacctcggcctc
accagcgcagaagccttcacctacacgtcgttaggggagaacatcttcatcgagggagtg
aacgacgccgaggacttgaagaagaccagagaggcgtttacactgctgggtgtgaaggag
aacagtcagagcaacatcttcaaaataatggcgtccatccttcacctggggaacgtggag
atctgctccgagagggacggagagtcgtgtcacatctcgaaggacgacccccacctgcag
cacttctgcaggctgctgggggtagagctgcagcagatggagcagtggctctgtcgcagg
aagttggccacctcctccgagacgtacgtgaagaccatgtccagcaaacaggcgaccaac
gcccgcgacgcgctcgccaagcacatctacgctcgcatgttcgactggatcgtggagcac
atcaacatgtccctgcagacgtccgccaagcagcactcgttcatcggcgtcctggacatt
tacgggttcgagacgtttgagatcaacagttttgaacagttctgcatcaactacgccaac
gagaaacttcagcagcagtttaactcgcatgtgtttaagttggagcaggaggagtacatg
aaggagcagattccctggactctgatcgacttttatgataatcagccgtgtatcgatctg
atcgaggctcgactcggcgtcctggacctgctggacgaggagtgtaaggttccgaaggga
acggacctgaactgggcccagaagctctacacacagcacggcagcagagaccagttccag
aagcctcgaatgtccaactcctccttcatcatcatacactttgctgacaaggtggagtat
cagtgcgaaggcttcctggagaagaaccgcgacacggtgtacgaggagcagatcaacatc
ctgaaggccagtcagtttcagctcgtagcggatctgttccacgagaagggcgacgccccc
tcctccaagagctccagggtgaacgtccgcccggcaaagccgacgccccgagggcccaac
aaggagcacaggaagaccgtgggacaccagttccgcagctctctgcatctcctcatggag
acgctgaacgccaccacgccgcactacgtccgctgcatcaaacccaacgacgtcaaggag
gccttctcgttcgactcgaggcgagcggtgcagcagctccgggcgtgtggcgtcctggag
acgatcaggatcagcgccgcaggatatccgtccaggtggacgtacccggacttcttcagc
aggtatcgagtgttgatgaggaaatctgacgtgacgtcgtccgacaagaagcaggtttgt
aagaacctgctggagattctcatcaaggatcccgacatgttccagttcggaaagacgaag
atcttcttccgggcgggtcaggtggcgtacctggagaagctccgcgcggataagttccgc
gccgcctgcatcaagatccagaagacagtccgaggctggctgcagagagttcgataccag
aagatccaaaggttggccgtcaccctgcagagatacggccgcggatacctggcccgcaga
cacgctgagttcctgcgtcgcactcgagcggcactcgtctgtcagaaacagttccgcatg
gtgagagacagacgggcctttctgagagtgagacaggcggtcgtcaccatccaggcgcac
gccagagggatgttcacccgcaggatctactgggagttcctcctgcaccacaaggccatg
atcatccagcggtgcgtccgcggctggctgcagaggaagaagttcagacgggcgcgaaac
gccgccatcatcatccagtgtgggttcagacgcacgcacgcgaagaaggaactcaaacag
ctgaagatcgaggctcggtcagcccagcacctgaagaacctcaactctgggatggagaac
aagatcgtccagctgcagaggaagatcgacgaccagtccaaagagctccggactcagaat
gagcagctgaaggtggtgaacgtcggtctgggctccgaggtcaacaagctgcagaagcag
ctggagcaggtcaggggtcagcgcggcgacagtggtcagctgacgtcgctgcaggaggag
ctggagcgtctgagggcggagctacaggaggcgcacgcccacaggaagcggctggaggag
gagcacggcagcgagaagctcgacctgcagcagagggtgaaggagctggagacagaaaac
tctctgctgaagagcgagaaggaagaactgaaccagaggatccgccagaaggagaagatc
tcagcagaggacggcagcagtcgagaggtgtctctgcagaaggagctggacttggagcgg
cagcggtaccagaaccagctcaaagagttctccagactggagcagagatgcgagaacctg
aaggaggagctgtccctgagcaagtttcacccgggtcaccggaggaacccgtccaatcag
agcagcctggagtcggactccaactacccgtctgtctccacgtcggaggtgggagacacg
gaggacgcggtccagctggtggaggagttgggcgtggagaaagcagcgatggacatcagt
ctgttcatgaagctgcagaaacgagtccgtgagctagagcaggagaggaagaggctgcaa
agcagcgtggacaagatggaggaggtcaccaaacgcaggggctccgaggccaagagtccc
acctccgagcgggaaactgcagatctggcctacgataatctcaagcgacaggagctggag
tcggagaacaagaaactgaagaacgacctgaacgtgttgaggaagtccatctccgagcgc
gcggctcagaacaactcgtccaacgagctgcaggacggatacaacgtgctgctcagtcag
ctgagagcagccaatgaggagctggacgctcgcaaggaggaagtgatcatcctcaagact
cagatcgtcagcaacgcccagcgacaggagatgaaccagcagcagcagagtaacaatgtt
cctggggttcctgagattcctgaggacaaagacgaggctgtcagagcctatcagggactg
acggaggccaagagacagcaggacagctggtatgtgaatgaagatggagagttgtcgttg
gcgtatcagggcctcaaacaagttgccaggctgttggaggcgcagctgcagtctcagacc
cgtcagcactcagatgagttggaggctctacacactcagatcgagcttctgaagttggac
atcgagaagaagcaggagatcctgaactacaccagctccttgtctcctgaggctcaggtg
gagttcagtgtccagcaggagatcacacgcctcaccaacgacaacctggacctcaaggag
ctggtggagaaactggagaagaacgagaggaaactgaagaagcagctcaggatctacatg
aagaaggtccaggagttagaggcctctcaggctgcagctctgagcaggaggtccagacct
gagctgagtcgtcaggtcactgtccagaggaaagagaaggactttgagggaatgttggag
ttttacaaggaggacgaagctctgctggtcaagaccctgatcactgacatgaagcccggc
tcagtgtcggcgaccgtcccctgcctcccggcctacatcctgttcatgtgcatccgccac
gccgactacgtcaacgacgaccagaaggtggagtctctactcacgtccgccatcaacgcc
atcaagaaggttctgaagaagaacagcgaggactttgagacaacgtccttctggctcgcc
aacaccagtcgtctgctccactgcctgaagcagtacagcggtgacgaggcgttcatgacc
cagaacacgagcaaacaaaacgaacactgtctgaagaacttcgacctggcggagtatcga
caggttctgagcgatctgtcgatccagatctaccaacagctcatcaaggtgtcggaggga
accatccagcctatgatcgtgtcggccatgttggagagcgagagcatccccagcctggcg
ggcgtgaagccaatgggctataggaaccgttcatccagcatggacacggagggtggcggc
cccagcagctacaccctggaggcactgatccgtcaactgggacagtttcacagcatcatg
agggaccacggcctggaccccgagatcgtgggtcaggtggtccgacagctgttccactgc
atcaacgccgttaccctcaacaacctgctgctgcgcaaggacgtctgctcctggagcacc
ggcatgcaactcaggtacaacaccagtcagatggaggagtggctcagggcaaacaacttg
taccagagtaaagctgcagcgactctggagtcgatcattcaggcggctcagctgctgcag
gtgaagaagaagacgtctcaggacgctgaggccatctgctcgctgtgctccgccctcacc
acgcagcagatcgtgaaggttctgaatctctacacgccgctcaacgagtttgaggaaaga
gtcacggtgtcgttcatcagaaccatccagaatcgtcttcaggagagaaacgatcctctg
cagttgctggtcgacaccaaacacactttccctgtcctcttcccctacactccgtcggcg
ctcagcctggagacgctgcacatccccgcctcccttggcctggacttcctcatcagggtc
tga
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integrated database retrieval system
