Scophthalmus maximus (turbot): 118285473
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Entry
118285473 CDS
T09850
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118285473
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118285473
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
118285473
NCBI-ProteinID:
XP_035465041
UniProt:
A0A8D3DST7
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Position
20:complement(11968502..12031861)
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AA seq
938 aa
AA seq
DB search
MEDKSNSFSSNKEEKADGNNVFQRQDSIQKNNTGGGSAKDHGNSVGFKGEREEAMVGFDD
LEAASRQHGFMQRQFGAMMQPGVNKFSLRMFGSQKAVEKEQERVQTAGYWIIHPYSDFRF
YWDLIMLIMMMGNLIIIPVGITFFSEQTTTTWLVFNVASDTIFLVDLVMNFRTGIVNEES
SEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKIL
SLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQYLVPLLQ
DFPPDCWVSLNGMVNVSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVGA
TCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKI
FDEDNILSELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYII
REGTVGKKMYFIQHGVASVITKFSKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLFS
LSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSLLLQKFQKDLNAGVFNTQENEILK
QIIRQDREMVMMVDRKQSVTGMNSTPMSGNSIINSPAQPPFSTAFGTNQLQQSSVPMTFS
ASAIANASAARMLPAAAAAAAAAAQGVYPVPSVSHGSLHSSSTNPQTPLQQAAIMSPCSF
TAAMCSPPVQTPLASRSFQYGSPTASQLSLIQQPIAQPSLSAQQQLAQQQQPAAAATSAT
QQQQQQQQPSPQQQQVPSPQRGDMHKSAQALQSGSLSRDVRHLSASQPSLPHDTSLGPRV
HPASGDSLASIVPPTAAAMQGMNLQSGIRTTVPQRVNLFRQMSSGALPPVRSAAAAAAAA
AAAASSSTQHRSSPGSRRDSVLSSTETEQDKMRFASNL
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaatccaattcgttctccagcaacaaggaggagaaggcggatgggaataat
gtgtttcagcggcaagactccatacagaagaacaacacgggcggcgggagcgcgaaggac
cacggcaactcggtgggcttcaagggggagcgcgaagaggccatggtcggctttgacgat
ctggaggcggcgtccaggcaacacggtttcatgcagaggcaatttggggccatgatgcag
cccggagtcaataagttctccttgcgcatgttcggcagtcagaaagccgtggagaaggag
caggagcgcgttcaaacggccggatactggatcattcatccatatagcgattttaggttc
tactgggacttgataatgctcatcatgatgatggggaatcttatcatcattcctgtggga
ataaccttcttctcagagcagaccaccaccacctggctggtcttcaacgtggcctcggac
acaatcttcctggtggacctggtcatgaacttcaggacgggcatcgtcaacgaggagagc
tccgagatcatcctcgaccccaaggtcatcaagatgaattacctgaagagctggttcgtt
gtggacttcctctcctccattccagtggattatatctttttgatagtggagaaaggcttt
gactcagaggtgtacaaaacagcccgtgccctgcgaatcgtccgcttcaccaagatcctc
agtcttctgcgtctgttgagactgtcacgactcatcagatacatacatcagtgggaggag
attttccatatgacctatgacctggctagtgcagtggtaagaatatttaatttgataggg
atgatgctgctcctgtgtcactgggatggctgtctccagtatctggtgcctctcctccaa
gacttccctcctgactgctgggtgtccctaaacggtatggttaacgtttcctggggtaag
cagtactcttacgccctcttcaaggctatgagccacatgctgtgcatcgggtatggagcc
cgggcgcctgtcagcatgtctgacctgtggataaccatgctgagtatgatagtgggtgct
acgtgctacgccatgtttgtgggccacgccacggctctgatccaatcactggactcctca
cgcaggcaataccaagagaagtacaagcaagtggagcaatacatgtccttccacaagctt
ccagcagacatgcgacagaaaatccacgactactacgaacatcgctaccaaggcaaaatc
tttgatgaggacaacatcctgagtgaactcaacgacccgctcaaagaggaaattgtcaac
ttcaattgtcgtaagctcgtggccaccatgcctctgtttgccaacgccgaccccaacttt
gtgacggggatgctgagcaagcttaagtttgaggtctttcagcccaacgactacataatc
cgagaaggcacagtcgggaagaagatgtatttcatccaacacggggtcgcgagtgtcatc
accaagttcagcaaggagatgaaattgactgatggatcatattttggagagatctgtctg
ctcaccaagggcagacgaacggcgagcgtgcgggcagacacctactgtcgactcttctct
ctctccgtggaccatttcaatgaggtgctcgaagagtaccccatgatgagacgcgctttt
gaaactgttgccattgaccgattggaccgcatcgggaagaagaactccttgctgctgcag
aagttccagaaggatctgaacgccggcgttttcaacacacaggagaacgagatattgaag
cagattatccgtcaggacagggagatggtgatgatggtggaccgcaaacagtcagtcacc
gggatgaactcaacaccaatgtcaggaaactccatcattaactcaccagcccagccgccc
ttctccactgcctttggtaccaatcagctccagcagtcctctgttcccatgaccttcagt
gcttcagctattgccaacgcctctgccgcccgcatgctgccagctgctgctgccgctgcc
gctgctgcggcccagggggtttacccggttccgagtgtttcccacggcagcctgcattct
tcctcaaccaacccgcagaccccgctgcagcaggcagcgatcatgtcgccatgctccttc
acggccgccatgtgcagtccgcccgtgcagacccctctggctagccggagcttccagtac
ggctcgcccacagcctcccagctgtcacttatccagcagcccattgcccaaccatctctg
tccgcacagcaacagcttgcgcagcagcagcagcctgctgcagcggcaacctctgcaaca
cagcagcagcagcagcagcagcagccgtcgccccagcagcagcaggtgccctcacctcag
cggggcgacatgcacaagagcgcacaggctcttcagtcaggcagcttgagtcgagatgtc
cgacacttgtcggcctcccaaccgtcactgccacatgacacatctctggggcccagggtg
cacccggcctcaggagactctctggcctcgatcgtgccaccaacagcagcagcgatgcag
ggaatgaatctgcagagtggcatccgcaccacggtgccccagcgggtcaatttgttccgg
cagatgtcgtcaggagctttgcccccggttcgctcagcagcagcggcagcagcggcggcg
gcggcggcagcatcatcctcaacccagcacagatcatcccccggatcgaggagagattct
gtcctgagcagtacagagactgagcaagacaaaatgcgttttgcatcaaatttatga
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