Scophthalmus maximus (turbot): 118285656
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Entry
118285656 CDS
T09850
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118285656 (msh4)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118285656 (msh4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
118285656
NCBI-ProteinID:
XP_035465300
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All DBs
Position
15:11971803..11978475
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AA seq
928 aa
AA seq
DB search
MIHGSTEEGTAGGGHTWAATPTGRGGLNETTSCGPRSTSSASSQHGLDGGSASCSRGPAP
ARPPGATGDLMGQFHHSLTRSNPLLLTTTSDSSSTRSHGGTPRLRRTPGAAGTHPAQTPL
TDHTATGCSSATTTSAASVIVAVVEGRGLARGEIGMASLNLKCPELALCQFADTGTYAKV
ITKMHILVPLEILMPDTASEKGKGTKLFKLITENFPCVAFTAIQRKYFNERKGLEYIQQL
CAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSFKGSEQTTMIDSASA
TNLELVVNNRDRRSEHTLFGVLNHTKTPGGARRLRSNILEPLVDVDTINMRLDAVQELLQ
DEELFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPQLRAV
LKNCNTSLLKAYSSSLEDNRFDLILEQIKTVINDETTYLKGSLNMRTQKCYAVRPNVNEF
LDIARRAYTEIVDDIAGLVNQTGEKYGMLMRTSFSTARGFFIQMKLEGVVLPEGGLPPEF
IKVTKQKNNCGFTTADLMKMNDRCDEALREIFHISYVVICQLLSTIHEQIHCLYKLSDAV
SMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERLAGQQPVSNNSYISDGSNFVI
ITGPNMSGKSTYLKQVALCQIMAQIAPCPIIPGSFVPADYASFRVADQIFTRIGVDDDFE
TNSSTFMLEMREISYIIHNVSDRSLIIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLF
ATHFLELCQLQSLYPSVENQHMEVQHTRSADTGTECVVYTYLLNRGCSEERHYGLRAAEM
TALPTSLIEEAKIIASNVSQQLLAKHHSDPETQRQRAVYHLATRLQQAARNSRLDPDSLR
MYLKGLRKQYEAELQAAGQPASMDTVEE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgattcatggcagcacagaggaggggactgcgggcggtggtcacacctgggcggcgacc
ccgacgggcagaggtggactgaacgaaacgacctcgtgcggtccgcgctccacctcgtcg
gcctcatcccagcacggtttggatggaggcagtgcgagctgcagccgcggccccgccccc
gcccggccccccggggccacaggtgacctgatgggtcagtttcatcacagcctcacaagg
tcaaatccgttactcctaacaacgacttcggacagctcctccacccgcagccacggtgga
acacccagactcagaaggacgccgggggctgcaggcacacatcctgcacagacaccgctg
actgatcacactgcaacaggttgctcctctgcgactacgacctctgctgcctctgtgatc
gtagcagtggttgaagggcgcggtttggccaggggagagatcggcatggccagtctcaac
ctgaaatgtccagagcttgcactctgtcagtttgcagacactgggacgtatgccaaggtc
ataacaaagatgcacatcttggtgccactggaaatactgatgccagacacggctagtgag
aaggggaaagggaccaagctgttcaagctcatcactgagaacttcccgtgtgtagctttc
actgcaatccaaagaaagtattttaatgagagaaaaggactggagtacattcagcagctg
tgtgctccagaatttggcaccgtcctcatggaagtgcaagctaaatattattgcttggca
gctgctgctgctttgctgaaatacttagagttcatccagaactccgtctacgctgccaag
tctcttaaagtgagctttaaaggcagtgagcagacaaccatgattgactcagcatctgcc
actaacctggagttggtggtcaataacagagaccgcaggagcgaacatactctttttggg
gtacttaaccacacaaaaacacccggtggtgccagaagattgcgctccaatatactggag
cctctagttgatgtggacaccattaacatgcgactggacgccgtgcaagagctgctacag
gacgaggagctcttcttcggcctgaagaatgccatcggtcatttccttgacattgaccag
ctgctctccgttcttgtccaaatcccgaagcaggaaacggtccaggtcgctgaagcaaag
attacacatgtcattcagctgaaacacacattggatcttgtgcctcagttaagggcggtg
ttgaagaactgcaacacatctctgcttaaagcatacagcagttcacttgaagacaacagg
tttgacctaatcctcgagcagatcaagacggtgattaacgatgaaacgacctacctgaag
ggcagtctgaacatgcgcacccaaaagtgttacgccgtgcgccccaatgtcaacgagttc
ctcgacattgcccgcagagcttacaccgagatagtggacgacattgctgggctcgtgaac
caaacaggggagaaatacggcatgctgatgcgaaccagcttcagcacagctcgaggtttc
ttcatccagatgaagcttgaaggagtggttttgcctgaagggggactccctccagagttc
atcaaggtgaccaagcagaagaacaactgcggcttcaccactgcggacctgatgaagatg
aatgaccgctgtgacgaggccctgagggagatctttcacatatcctatgtggtgatatgt
caactgctgagcaccatccatgagcagatccactgcctctacaagctttctgatgctgta
tccatgcttgacatgctgctgtcacttgcaaatgcgtgcaccatctcggactacgtacgt
ccagagttcacagacacactggcgatcaagcagggccgtcaccccatactggagcgactg
gctggacagcagccggtatcgaacaatagctacatctccgatggcagcaactttgtcatc
atcactgggcccaacatgagtgggaagtccacctacctcaaacaagtggcgctgtgtcag
atcatggctcagatagctccctgccccattattccaggctcttttgtcccggccgactat
gcctcttttcgtgttgctgatcagattttcaccagaattggtgtggatgatgattttgaa
acaaactcttccaccttcatgttggaaatgagggagatctcttacatcatccacaacgta
agcgacaggtccctgatcatcattgatgagttgggacgtggcaccagtgctgaggagggc
attggcatctgtcactcagtttgtgagttcctccttggcctcaaggcgttcaccctgttt
gccacacactttcttgagctgtgccaactacagtctctctacccaagtgtagagaaccag
cacatggaggttcagcacacacgcagtgctgacaccggcactgagtgcgtggtgtacaca
tacttgctgaatcgaggatgctctgaggaaagacactatggtctgagagcagcagaaatg
acagcccttcctacaagtttaatcgaagaggctaaaatcattgcctctaatgttagccag
cagctcctggccaaacatcacagtgatccagaaacgcagaggcagagagctgtgtaccac
ctggccacccgcctccagcaggctgccaggaactccagattggaccccgacagcctgcgc
atgtatctgaaaggcctgaggaagcagtacgaggcagagctgcaggccgcagggcagcca
gcgtccatggacacggtggaggagtga
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