Scophthalmus maximus (turbot): 118285795
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Entry
118285795 CDS
T09850
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118285795 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118285795 (rab11fip5a)
Membrane trafficking [BR:
smau04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
118285795 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
RNase_Y_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
118285795
NCBI-ProteinID:
XP_035465529
LinkDB
All DBs
Position
15:complement(3269053..3291734)
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AA seq
1445 aa
AA seq
DB search
MSSLAADEDQQWSPSHVQVTVLRGRGLRGKGKHGTSDVYTIIQLAREKYSTRVAEKTTEP
EWREECSFELQPGALRRRSGGGGGAAAGELVLTVMHRALIGLDVFLGQAVVPLDEVFHES
RCAKNQWYRLNSKTGKKEKERGDIQVTIQFTRNNLTASMYDLVMKDKGASTFSKLKERMR
GKRRSIDDDSSPANLPGGSLTQVRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGKLR
KSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTATT
SPSLKCDFGDEVGEITIAVPQPTVCVNGSHAYRVQPLDPGSGKPVDSLGLGLLQKSLPLS
VSLQSLSPRASATDPQKGPAGDGRRWSFDKPGEEEKAAIAAALEQGGPMQGEDEERLGTA
ESESHGKKQKRNLFSHGRSESPGTGPSPSKDGSEEEEKHKGWFGSKDSNSKPSSVVSPKL
ESRSRPHPSPPLPSSNHPPGAPVDLAPLVSPLHHTNPFCHSQTTSPPISPCNPFFSVLQH
NPFFEDTPNTRTPAKPSLPPLPYLSSARPPISQLFPQTSNLNNTLTLSDPTAEEDSIFGT
GAKGDPMAKIPAAPTEGEKSANPFMSAGELEPDSEWDESFEAFAAGRLQSPEDPTTDCET
QQNTPSDRPLENCDDKGASVPITDPDQNTNMDDALLHQPWREVISEAHEATSQVTNTDAF
AQFLETIPEQMSLESDNITLNTSADSATLDACTETNQANSTTKANDSSSTNMLHGPSHAS
SVQLNSSSPDPGSSGIGSSAEEDFLSCLSSYSDKFSASSCEEAEARFFESNIQGFEQSFE
PAVAKSPKPSDSEEDFTDRSNDRTVFDVPQQGSDERVGSKDSRAPQSPVLTPEELVITAR
ETETEGADAQTLNIPNVPDLLPKPSELQLKSGVCSQSDDESGGKGIDEINSSLVDFSKEF
VDGSVNNGADVRILATPDDVFSSTLPSLYIRTSSPDVMQSSWDSSFGNTNVRGQGASQCS
PVPFGAFCEASPGQDFDNTLLHTRVSDLSSSSFLQSLYVSSDSQDYQTCASHQSSDASSV
SEPDKTQRSANSTLCGEPSDIQTTADAALGLEDSPSASTSPIRETTQTDRFEEYCCAAAD
DNTATIETQFMIGGDFGLHVLPAAPADSEKSCDPKWLGEGGVEGPHVVLDDGFSKGPEAR
SAALHRSQSEGTLTPAFDELLLPSFGSDPGATQGSSSAQPDPALACLTSFAPSLTPRSFP
VALCSFPPLANAFARSPPSAARAAAPQPRETQPPPPPPQQQAASQQSSPHPVKPLTTALQ
AEEKRTEGRSVLATGLEKLKSTIHPGRSSQISEQATDRRKSLTEGAGSYYHLTHSELVAL
LVQREADLERRKAEFERQRVLLAKREVELRRLKPQVKDLEDYIDTLLVRIMEQKPTLLQV
RSKFK
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctcgccgcggacgaggaccagcaatggtcgccgtcgcacgtgcaggtgacg
gtgctgcgcggccggggcttgcgcggcaagggcaagcacggcaccagcgacgtgtacacc
atcatccagctggccagggagaagtactcgacgcgcgtggcggagaagaccacggagccc
gagtggagggaggagtgctccttcgagctgcagcccggcgcgctgcggcggaggagcggc
ggcggcggcggcgcggcggccggcgagctggtgctcaccgtcatgcaccgggcgctcatc
gggctggacgtgttcctcgggcaggcggtggtgccgctggacgaggtgttccacgagagc
cgatgcgcgaagaaccagtggtacagactcaactccaaaacggggaagaaggagaaggaa
cgaggagacattcaagtcaccatccagttcacccgaaacaacctgacagccagcatgtac
gacctggtcatgaaggacaagggcgcctccaccttcagcaagctgaaagaacgcatgagg
gggaagaggcgatccatcgacgacgactcctcgccggccaacctgccgggtggatctctg
actcaggtgcggcagcggctgccgagcgatggaggcggggaggaggactacgaggatgac
gaggggggcgaggcccggcggagcaagatgaggaccttcttcctgagagggaagctgagg
aagtcgtcagacactcgctccagcacatcgctgggctcggagagcagcgagtcgtcgtcg
cggggcggcagcctcagtcccacggccggcatcagtgtggtggtgtctgacctctccaac
tcgcccagtaacagcagcaacctgacggcagacaacagcccagagcacacagcaaccacg
tcgccctctctcaaatgtgactttggtgacgaggtcggcgagatcaccatagcagtgcct
cagcccactgtgtgcgttaacggaagccatgcttacagagtccagcccctggacccaggc
tcaggaaaacctgtggattctttaggtctgggcctgttgcagaagtctttgcctctgtcc
gtgtccctacagagcctcagcccgcgtgcctccgccacggacccccagaaaggtcccgca
ggagacgggcgccgctggtcctttgacaaacccggcgaggaggaaaaggcggccatcgcg
gcggctttggagcaaggcggccccatgcagggtgaagatgaggagcgtttgggaacggcg
gaatcggaaagccacgggaagaagcagaagaggaacttgttctcccatgggaggagtgag
tcgcctgggacagggccgagtccgtccaaggacgggtcggaggaggaggagaaacacaag
ggatggttcggatcaaaggactcaaacagcaaaccaagctcggtggtgtcacctaaacta
gagtccagatcccgcccccacccatctcctcctctcccttccagtaaccaccctccgggt
gcccctgtagatctggcccctctggtttctccactgcatcacactaaccccttctgccat
tcacagaccacgtcacctcccatatccccctgcaaccctttcttctctgtcctccagcac
aaccctttctttgaggacacgccaaacactcgcacgcccgcaaaaccttcattgcctcct
ttgccctatctctccagtgccaggccgcccatatctcagctctttccgcagacgagtaac
cttaacaacactctgaccctcagcgacccaaccgcggaggaagactccatctttggcaca
ggtgcaaagggtgacccgatggccaaaattcctgcggctcccacggaaggggagaagtcg
gccaaccctttcatgtccgctggggagctggaaccagattcagagtgggacgaatccttt
gaagcatttgccgctggcaggctgcagtctcccgaggatccgaccacagattgcgaaaca
cagcaaaacacacccagtgaccgtccgctggaaaactgcgatgataaaggagcatcagtc
cccataacagatccagatcagaacacaaatatggatgacgcactacttcatcaaccttgg
agagaagtcatatccgaagctcatgaagcgaccagccaggtgaccaacacggacgcattt
gcacaattccttgaaacaatcccagagcagatgagcttggagagcgacaacataacttta
aacacttcggctgactcagcaacgcttgatgcttgcactgaaactaatcaagctaacagt
actactaaggcaaatgattcgtccagcactaatatgctccacggcccctctcacgcttca
tctgtacagctcaacagcagctccccggatcctggctcgtcgggtattggcagttcagca
gaagaggatttcctctcctgtctttcttcttattcagataaattttctgcgtcgtcctgc
gaggaagctgaggcgcggttctttgaaagcaacatccagggctttgaacaatcctttgag
cccgccgtggctaaaagtccgaagccctcagactctgaagaagacttcaccgacaggtcg
aatgatcggactgtattcgatgtaccccagcagggtagtgatgaaagggtcggttcgaaa
gattcaagggcaccacagtccccagtgctaacacctgaggagctcgtgatcactgcaaga
gaaacggaaaccgaaggtgcagatgctcagacgctaaacattcctaatgtccctgacttg
ttgccgaaaccctctgaactacaactgaaatccggtgtctgttcacagtcagacgatgaa
agtggagggaaaggcatagatgaaatcaacagctctcttgtggatttttccaaggagttc
gttgacggctctgtcaacaacggtgcagatgtgagaattcttgcgactccagatgacgtc
ttctcctccacactcccgtcgctgtacatccgaacctcctcccccgatgtgatgcagagc
tcttgggactcatcctttgggaacactaatgtacgagggcagggtgctagccagtgttct
ccagtgccatttggagctttttgtgaagccagtcctggccaagacttcgacaacacacta
ctgcacactcgggtgtctgatctgagctccagcagctttctccaaagcctttatgtcagc
agcgactcgcaggattaccaaacttgtgcgtctcaccagtcatccgatgcctccagcgtc
tcggagcccgacaagacgcaacgctcggcgaactcaacgctctgcggcgagccgagcgac
attcagacgactgccgatgctgcgttgggcctagaggattcccccagcgcatccacgtca
cccataagagaaactacccaaactgacagatttgaagaatactgttgcgcagcagctgat
gacaatacagcaactatcgagacacaattcatgatagggggtgattttggtctacatgta
cttcccgcagcaccagcagactctgaaaagagctgcgatccaaagtggctcggtgaagga
ggtgtggaaggtccgcatgtcgtcttagatgacgggttctcaaaaggccctgaggcgcgg
tctgctgcgctacaccgctcacagtctgagggcacactgactccggcctttgacgaactc
ctcctgccctcctttgggagtgatcccggtgcaacacaggggtcctcctcggcccagcca
gaccccgctctcgcctgcctcacctcctttgctccttctctaactcctcgtagcttcccc
gtagcgctctgttccttccctccccttgccaacgcttttgcgaggtcgccacccagcgcg
gcacgagccgctgcgccgcagcctcgggagacgcagccgccgccgccgccgccgcagcag
caggcagccagtcagcagagcagtccccacccggtgaagcccctgaccactgccctgcag
gcggaggagaagcggaccgagggccggtcagtgctggccaccggcttggagaagctcaag
tccaccatccacccggggaggagcagccagatcagcgagcaggcgacggaccgcaggaag
tctctgacggagggcgcgggctcgtactaccacctgacccacagcgagctggtcgccctg
ttggtgcagcgggaggcggacctggagcggcggaaggcggagtttgagcgtcagagggtg
ctgctggccaagcgggaggtggagctgaggcggctgaagccgcaggtcaaagatctggag
gactacattgacacgctgctggtgcgcatcatggagcagaagcccacgctgctgcaagtg
cgctccaagttcaagtga
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integrated database retrieval system
