Scophthalmus maximus (turbot): 118285904
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Entry
118285904 CDS
T09850
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118285904 (shprh)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118285904 (shprh)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118285904 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
DUF684
Motif
Other DBs
NCBI-GeneID:
118285904
NCBI-ProteinID:
XP_035465744
LinkDB
All DBs
Position
15:complement(5576421..5591512)
Genome browser
AA seq
1662 aa
AA seq
DB search
MSSRRKRAPPVRVGEEAKKRLNWNMLDDCKSEVLPEDDDDQTPNCSSLPCDPTPSGFFDS
ATVDATDASCTRSVRFAEELPSTSSEAAAAAAAASAAASAAASASLALTVVPASKLGHIW
KALIGEFSVRPAWLPCDCEQKGFMLHRMGDQLCLSYSSCDERSGPQWKPDEDTCTAECSL
SQILLEDLDWLQKRSVMQLCHQAEEESIKVGIYLLETGLGKPECLSEGNARPKKANQLMQ
KLMEYFYDFIIPEVVENEVEECDTDLERQNVEELYDYVRHLHQSEGQEVTYDVQHKALVP
VLRPYQSQAVNWMLRREKYRKSSHKEQSLHFLWREWVTLCGKKLFYNPFTGCIIREFPLA
GIEWPGGILADEMGLGKTVEVLALILFHTRLDLEQEALTLPAGKSVNYFVPPPPLERKKV
IRCKSEFQPKMKISHPTVRVMLLTAIKEMRSGKGASVNAVFTYIRATYGYDLLKNRYHIK
KTLAKLIDEGLVDRVKGRGLAGSFKLGKKYKETKKTSAGASKFTSKSTEGTPRKMFQRRA
KEKAEAALKNTLTEDERDLSPPTSYCPVPKERETKEQWDLNDTVDQVDDVLDSSTNSSQM
SQDKSESDFQGEAPPLDSQEEKETPTRACVVPFNTPHYRFECICGELGIIDYKARVQCMN
CQLWQHADCVNYKEESLETTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRHIS
STSLRVLVYQGVKKHGFIQPRMLAEQDVVITTYDVLRSELNYVDIPHSNSEDGRRFRNQK
RYMAVPSPLVAVEWWRICLDEAQMVECATAKAAEMALRLASVNRWCVSGTPVQRGLEDLY
GLVLFLGVDPYWVKYWWVQLLYRPYRHGNTEPLYNVITQILWRSAKKDVIDQIQIPPQTQ
EVHWLHFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLDRRTVNTILYPLLRLRQ
ACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIRDK
FVEAVEMYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLSAKHPGIPPTLRDDRLSEEA
EQLRQHYMTKYDSEVADAHQALQPVLQNIKELKRKVKPNSPWWLEVIQRAIDCSTDDDLV
SRIKNELTSSYKQQASKLSMADKFRDACGLQFLLTKQMEDLMKSKKTVQDAVKNLEGPAS
KTVIDEVTICHLRPIRLPLNNCVFCKADELFVDYESKLFSHTVKGQTAIFEEMIEDEEGL
VDDRLPTTSRGLWAASETERTLKAILSFAKAKRMDPELVEEGNTFMELFENWKKEYKVLH
EYWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVEQNRVKLLNDQAVAKS
QLQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECISIIV
EQYSTGSRRRAIKCAICRQNTSHTEISYVFTTQSSGHDQDIPVKGSHSTKVEAVVRTLKK
IQLTDPGAKCLVFSTWLCVLDIIAKALFDNGMEFSQINGIHKFQENLCSFKYEEKINILL
LPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEER
MQAMLKTAEKSHTSTTMKHSEAAVLTVADLADLLTDDAEHLD
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgaagaaagagggcccctccagtgagggtcggcgaagaggccaagaagagg
ttgaattggaacatgctggatgattgcaagagcgaggtgctcccggaggatgacgatgac
cagacaccaaactgttcctcgcttccgtgtgaccccactcccagcggcttctttgactca
gccaccgtggacgcaacggatgcttcctgcacccgctctgtccgcttcgcagaggagctc
cccagtacgtcgtcagaggccgccgccgccgccgccgctgcctcagccgctgcctcagcc
gctgcctcagcctctctggcactgactgttgtgccggcttcaaagctgggccacatctgg
aaggcgctcattggggagttcagcgtccggccagcttggctcccgtgcgactgtgagcag
aaagggttcatgctccacaggatgggggaccagctctgcctcagttacagcagctgtgat
gagcgctcggggccgcagtggaagcctgatgaggacacatgcacggcagagtgcagcctc
agtcagatcctgctggaggatctcgactggctacagaagaggagtgtgatgcagctctgc
caccaggcagaagaggagtcaatcaaggtggggatttacttgctagaaactggtctcggg
aagcccgagtgcctcagtgagggaaatgctcggccgaagaaagcaaatcaattaatgcag
aagctaatggagtatttctatgatttcattatccctgaagttgttgaaaatgaggtggag
gagtgtgacaccgacctggagaggcaaaatgtcgaggagctttacgattatgtcaggcat
ctgcaccagagcgagggccaggaagtgacctatgatgtccagcacaaggctcttgttcct
gtgctcagaccctatcagagccaggcggtcaactggatgctgaggagggaaaaatacagg
aagagctcacataaagaacaatcgctgcatttcctctggcgggagtgggtcactttgtgt
ggcaagaagttgttctacaacccctttactggctgcataattcgagaatttccactggcc
ggcatcgagtggccaggtgggatcctggctgatgagatgggactcggaaagacagtggaa
gttctggctctcatcctgtttcacacccggctggacctggagcaggaggccctgaccctg
ccggcgggaaaatcggtgaactactttgttcctcctccgccattagaaagaaagaaagtc
atccgctgcaagtccgaatttcagccaaaaatgaaaatatctcacccaaccgttcgcgtc
atgctgctcactgcaataaaggaaatgagatctggcaagggagcctcagtcaacgctgtg
ttcacttacatccgtgccacgtacggttatgacctcttaaagaaccgataccacatcaag
aagacgctggcaaagctgatagatgaaggcctggttgaccgggttaaaggtcgcggcttg
gcagggtcatttaagctggggaaaaaatacaaggaaacaaagaagacatctgcaggagca
tccaagtttacctcaaaaagcacggagggcacgcccaggaaaatgtttcagagaagagcg
aaagagaaggcagaagcagctcttaaaaacactcttacagaagatgaaagagatctgagc
ccccctacatcttactgtcctgtaccaaaggaaagagaaacaaaggagcagtgggatctg
aatgacacagtagatcaggtggatgacgtgctggattcgtccacaaactcctcacagatg
tctcaggataaaagcgagtcagatttccagggagaagctcctccgctcgactcacaggag
gagaaggaaacccccaccagagcgtgtgtggtccctttcaacaccccacactatcgcttt
gagtgcatctgtggtgagctgggcattatcgactacaaggcccgtgtccagtgtatgaac
tgccagctgtggcagcatgcggactgtgtaaactacaaagaggagagcctcgaaactacc
cctttctattgccctcactgcctggtcgccatgaaacccgtctccactggcgccaccctc
atcatctccccgagctccatctgccaccagtgggtggaggagatcaaccgacacatcagc
tctacctcactccgcgtgctggtttatcagggcgtgaagaaacacggattcatccagccg
cgcatgctcgccgagcaggatgtggtcatcaccacctatgacgtgctgcggtcggagctc
aactatgtcgacattccccacagcaacagcgaggacggacgccgcttccgcaaccagaag
cgctacatggctgttcccagtcctctggtagcggtggagtggtggcgcatctgtctggac
gaagctcagatggttgaatgtgcaactgcgaaggctgcagaaatggctctacgtcttgca
tctgtcaaccgctggtgtgtcagtggcactcctgtccagagaggcttagaagatctgtat
ggccttgtacttttcttgggagttgacccatactgggttaaatactggtgggtccagctc
ctttatcgcccttatcgacacggaaacacagaacctctgtacaatgtaatcactcaaata
ttatggcgatcagctaaaaaggacgtcattgatcagatccagattcccccccagacacag
gaggtccactggctgcacttctcccctgtcgagggtcacttctaccaccgtcagcacgag
gtctgctcccaggacgctttggtcaaactcaggaagatctctgactggagcctgaaactt
ggcagcctagaccgccgcaccgtcaacaccatcctgtacccgctgctgaggctgcgccag
gcctgctgccatccacaggctgtgaggggggagttcctgccacttcagaaaagcaccatg
acgatggaggagctcctgaagtccctacagaagaaatgtcgagtggagtgtgaagaagct
cacagacaattggtgtgtgcgctcaatggcctggctggaattcacatcatcagagataag
tttgtagaggcagtcgagatgtatagagaagtgcttcgctcatcagaggagcacaaaggc
agactgaagacagattccttacagagacttcatgctacccacaatttgatggaactgctg
agtgcaaagcaccctgggatacctcctacgctgagagatgaccgactaagtgaggaggcg
gagcagctgcgacagcactacatgaccaaatatgactctgaggtagcggatgcccaccag
gctctgcagccggtgttacagaacatcaaagagctgaaacgcaaagtgaagccgaactct
ccatggtggctggaagttatccagagagcaatcgactgctccaccgacgacgatctagtg
tctcgcatcaagaatgagctgacatccagctacaaacagcaggccagcaagctctccatg
gccgacaagttccgtgacgcctgtggtttgcagttcctgctcaccaagcaaatggaagat
ctgatgaaatccaaaaagacggtgcaagatgcggtgaagaatcttgaaggcccagcatca
aagacggtgattgacgaagtcaccatttgtcacctcaggcctattaggctcccacttaat
aactgtgtcttttgcaaagcagatgaacttttcgtcgattatgagtccaagctgttttct
cacacggtgaaaggtcagacggccatctttgaggaaatgatcgaggatgaagaggggctg
gtggacgaccgtctccccaccaccagccgaggtctctgggcagccagtgagactgagcgc
actctgaaggccatcttgtcctttgccaaagctaaacgcatggatccggaattggtggag
gagggtaacactttcatggagctgtttgagaactggaagaaggagtacaaggtgctgcac
gagtactggatggtgctgcggaatcacgtgtctgccattgatgagttgggtatggccaca
gaaaggttgcgcgtgcgcctccccgacgagccgaagcccaaactgcttcacatcatcgag
ccacatgaggtggagcagaaccgagtcaagcttttgaacgaccaggcagtggccaagtct
cagcttcagaagaagcttggccagtttctgtacctcacaaatctggagaagtcccaggac
aagtctactggagggttgaatccagagccgtgtcccatctgtgcacggcccctgggacag
gagtgggcggtgctgacttgtggccattgcttctgcaacgagtgcatttctatcatcgtg
gagcaatacagcacgggatcaaggcggcgtgccatcaagtgtgccatttgtaggcagaac
acatcccacacagagatctcctatgtgttcaccacgcagtcgtccggacacgaccaagac
atcccggtcaaggggagccactctaccaaagtggaggcagtggtgagaacactgaagaag
attcaactgaccgaccccggggccaagtgtctcgttttctccacgtggctttgcgtcctg
gacatcattgctaaggccttgtttgacaacggcatggagttctcacaaatcaatgggatt
cacaaattccaggagaacctgtgctccttcaaatacgaagagaagatcaacattcttctc
ctccccctccacacgggctccaacgggctgaacatcatcgaagcaactcacgtgttgctg
gtcgagcccatcctcaaccccgctcacgagctccaggccattggccgggtgcaccggatc
ggccaaaccaagccgacgtttgttcacagattcctcattaaatccacaattgaagagaga
atgcaggcaatgctgaagacggcagagaaaagtcacaccagcacaaccatgaagcactcg
gaggctgcggtgctgacagttgctgacctcgctgatctgttaactgatgatgctgaacat
ctggattga
DBGET
integrated database retrieval system
