Scophthalmus maximus (turbot): 118285906
Help
Entry
118285906 CDS
T09850
Name
(RefSeq) calpain-2 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04141
Protein processing in endoplasmic reticulum
smau04210
Apoptosis
smau04217
Necroptosis
smau04218
Cellular senescence
smau04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118285906
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118285906
04217 Necroptosis
118285906
04218 Cellular senescence
118285906
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118285906
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118285906
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
118285906
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C2: calpain family
118285906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_6
EF-hand_7
EF-hand_1
DUF6613
Motif
Other DBs
NCBI-GeneID:
118285906
NCBI-ProteinID:
XP_035465749
LinkDB
All DBs
Position
15:15966374..15983775
Genome browser
AA seq
718 aa
AA seq
DB search
MRTLSLSVPDTQQSSTTAAMPSPGVCMNIINARNGKNGYGTISNPVSFLNQDYQQLKQYC
LSRRVRFIDETFPPDRNTIGQGLLKPSDLDRVKWLRPTKIVSDPSFIVDGVSRFDFGQGL
VGNCWFLASIGALTFQDNILKQVVPPEQKFDADYSGLFHFRFWRFGKWVDVVIDDKLPTV
DGRPIFVSSKEPTEFWPALLEKAYAKVCGSYADMNAGTPAEALVDFTGGVHMCINLSDPP
PNLWELMFRAGQSSSLMGCGTPNGATSENTVQPNGLVKGHAYTVTGLKQMISRGQLIHMV
RLWNPWGHKEWNGDWSDKSSLWQTVSQEDREECLSVGDDGEFWMSLEDFCKFYNDLDICC
LCPDFLDGSSSCHWKTSIYDGRWVAGTTAGGQMTHTETFWTNPQYRIRIGKLLGECSQQQ
GDKNLLVSLMQMPDKRNRRLVQNFNIGFMIFEVPEEYKAETGKFPASFFSRNRPVVKTNI
FLDAREVMKFVMLEPGEYLIVPSTFNPNETTSFILTILSKAETHVHENSGGRNHEHMEAK
EPTPGGKGADDDNKRTFFRQYSDKYEEVDAEQLKMILNDWILKGDLKSGGFSIDACRSMI
ALMDSSITGKLNGDEFLRLWKNVITYKDIFFSTDVSRTGTLSLNELRNAIMATGKRVSDD
MLNLMALRYGAASGHMTLESFISLVLRFDCMNQIFRQLSDGSAMTLRETEWLYLSMYT
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacactttctctctctgtgcctgatactcaacagagctcaaccactgcagcaatg
cctagcccgggtgtgtgtatgaacatcatcaatgcacgtaatggaaaaaatggatatggg
accatctccaaccccgtgagcttcctcaaccaagactaccagcagctgaagcagtactgt
ctcagccggcgggtaaggttcatcgatgagacgttccccccggacaggaacaccattggc
caaggcctattgaaaccttctgatctggaccgagttaagtggctgagaccaacgaaaatt
gtttctgatccatcgtttattgttgatggggtctccagatttgactttgggcaaggcctg
gttggaaactgttggtttcttgcatctatcggagcactgacgttccaggataacatactc
aaacaagttgttcctccagaacaaaagtttgatgcagactactccgggctgttccacttc
aggttctggaggtttgggaaatgggtggatgttgtaattgatgacaagctaccaacagtt
gatggcagaccaatctttgtctcttccaaagagccaactgaattctggcctgctttactg
gagaaagcctatgccaaggtgtgtggttcctatgcagatatgaatgccggaactcctgct
gaggctttggtagacttcactggtggtgtacacatgtgcatcaacctgtcagatcctcct
ccaaacctgtgggagctgatgttcagagcgggccaatccagttctctgatgggttgtggg
acacctaatggggccacatctgaaaacacagtgcaaccaaatggattggtcaaaggtcat
gcctatactgtcacaggtttgaaacagatgataagccgagggcaactcatacacatggtg
cgtttgtggaacccctggggccacaaagagtggaacggagactggagtgataagtcatct
ttatggcaaactgtgagtcaggaagatcgtgaggagtgcctttccgtgggtgatgacgga
gagttttggatgagcctagaagacttctgtaaattctacaatgatcttgacatctgctgt
ctgtgtcctgacttccttgatggaagctcctcatgccattggaagacgtcaatctatgac
ggcagatgggttgcaggaaccactgctggaggacagatgacgcacacggagaccttttgg
actaatccgcagtatcggatcaggattggtaaattactcggtgaatgttctcagcaacag
ggtgacaaaaacttgctggtgtctctcatgcaaatgcctgacaaacggaatagacgcctt
gtccaaaatttcaacattggattcatgatttttgaggtacctgaagaatacaaggcagag
acggggaagttcccagcctctttcttcagcagaaacagacctgtggtcaagacgaatata
ttcctggacgcacgtgaggtgatgaagttcgtcatgctggagcctggtgaatacctgatt
gtgccgtccaccttcaatcccaacgagacaacctccttcatcctgacaatcctgtccaag
gcagagacccatgtccacgagaattctggtggccgaaaccacgaacacatggaagcaaaa
gagccaacaccaggcgggaaaggagcggatgacgacaataagagaacatttttccgtcaa
tattctgacaagtatgaagaagtggatgctgagcagttgaagatgattctaaatgattgg
atcctgaaaggagatttgaaatctggaggcttcagcatcgacgcctgtcgcagcatgatt
gctctgatggattcatctatcacaggcaaactgaatggggacgaatttctgcgtctgtgg
aagaatgtcatcacatacaaggacattttcttcagcacggacgtttcacgtactggaaca
ctgtcactgaatgagctcaggaatgcaatcatggctacagggaagagggtcagcgatgac
atgctgaatttgatggctctgcgctacggtgccgcctctggacacatgacactggagagt
ttcatcagtctagttctccgctttgactgcatgaaccaaatcttcaggcagttgtccgat
ggatcagccatgactcttcgcgaaacagagtggttgtacctttcgatgtacacttaa
DBGET
integrated database retrieval system
