KEGG   Scophthalmus maximus (turbot): 118286031
Entry
118286031         CDS       T09850                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    118286031 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smau03009]
    118286031 (wdr43)
Ribosome biogenesis [BR:smau03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    118286031 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_WDR3_2nd Beta-prop_VPS8 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_Aladin Beta-prop_WDR41 ASA1 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd NBCH_WD40 CFAP251_N Beta-prop_IP5PC_F Beta-prop_Nup120_160 Paf1 Beta-prop_RIG_1st Helitron_like_N UTP15_C
Other DBs
NCBI-GeneID: 118286031
NCBI-ProteinID: XP_035466011
UniProt: A0A8D3AXC1
LinkDB
Position
15:complement(18021544..18037472)
AA seq 646 aa
MAAHAGGSTQLLPCIFSPKPRQYLALCAQDGRLRVWNTDSKSLHQEYVPSAHLSATCTCI
AWGPCRTVKEGPKKKKRRSEAGQSEEKADLLAMGTAAGTVLIYSAAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKMRSKWKADRAAVTSLCVSHDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPQHIDLVTSNSKEEPVKLAVVCKDGQLHLFEHFLNGPCKKPLSPV
CTVQMSDTKVSPVPIPLLAAVLGADSRTVLLSYGNHLQPVMEKVEINTSERHVCLTRDVQ
TSLSLSMETTVSKVKTPIVNTKSKVLVPGLPGHQAPVKGTARGSEKRKKDTDTKEMSIAE
RLGEIDLSTVTSEKGAPKGMASLQTDNFAVLLVQGLESDDPNILNKVFQTRKENIIKKTV
ARLPLPAVLPLLEQITKRLQGHPFMAALMVRWLKAVIMHHTSYLSSLPDLVTQLGVLYHM
IESRVKMFQKLTKLHGKLYLLMTQVATSDSGNTVAEVDHTAKLVYEEESSDEDEASGDEG
LPGDDSDNWEEDEEVVMDEDENPDSRTESKANGEEDMEHENESEEE
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcggctcacgctggcggctccacgcagctgctgccttgcattttctcgcccaaaccg
cgacagtacttagcgctgtgtgcccaggatggccgacttcgcgtttggaacacagacagc
aaatcccttcaccaagagtacgtgccttcagcccacctgagcgccacttgtacctgcata
gcctggggaccatgccggacagtcaaggaggggcccaagaagaagaagaggcgatcggag
gcagggcagtcggaggagaaggcagacctgctggcgatgggcacagcagcgggaactgtg
ctcatctacagcgcagcaaagggggcactgcactgtaccctggatggaggccatagtgga
ggagtgaattgtgtccagtggcaccctgaagacagtttattatacagcggctcagatgat
acaaacattattgaatgggatctgcaaacggggaagatgcggagcaagtggaaggcagac
cgtgctgcagtgaccagtttgtgtgtgagccacgatgggaagctgctgctctcggctgga
cagataatcaagatgtgggacctggacaccaaggaggtttacaggaaattcacaggccac
tccacagctgtgacgaccctgtgcttcgccaccacacgacctcccgacagcaacggcctc
tatttcctatctggtgccgcacatgatcgactgctcagtgtatggcaagtacgagaagac
ggaaaggacaagaactcggtggtgtccttcacactgacggacgagcctcagcacatcgat
ctcgtcacctccaacagcaaggaagagccggtgaagctggcggtggtgtgtaaggatggc
cagttgcatctctttgagcactttttgaacggaccctgcaagaagcctttgtcacccgtg
tgtacggtgcagatgtcggacacaaaagtctccccagtgcccatccccctgctggcagcg
gtcctcggggccgatagtcggacagtcctgctgtcctacggcaaccacctacagcctgtt
atggagaaggtggagattaacacatcagagagacatgtctgtttgacccgggatgttcag
accagtctgtccctttccatggaaaccacagtttccaaggtgaaaaccccgattgttaac
accaagagcaaagtgttggtcccagggcttcctggccaccaagccccggtgaagggaacc
gctcggggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcggag
cgacttggtgaaattgatctgtctacagtcacctctgagaagggagctcccaaagggatg
gcctctttgcagacggacaactttgccgtgctgctggttcagggcctggagagcgacgac
cccaacatcctaaataaagtattccaaactcgcaaagagaatataataaagaaaacggtt
gctcggttacccctccctgctgttttaccattattggaacagatcaccaagaggctccag
ggccatccttttatggcggctctcatggtacggtggctcaaggcagtaatcatgcaccac
acatcatacctgtcatcgctgccggacctggtaacccagctgggagtgctgtatcacatg
attgagagcagagtgaagatgttccagaagctaaccaagctgcatgggaaactgtatctc
ctgatgacgcaggtggcgacaagtgacagtggtaacacagttgcagaggttgaccacaca
gcaaagctggtgtatgaagaggagtcatctgatgaagatgaggcctctggtgacgaaggt
cttcctggtgacgactctgataactgggaggaggatgaggaggtggtgatggacgaagat
gagaatccagacagcagaacagaatccaaagccaacggagaggaagacatggagcacgag
aatgagagcgaagaagaatga

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