Scophthalmus maximus (turbot): 118286031
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Entry
118286031 CDS
T09850
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118286031 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118286031 (wdr43)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118286031 (wdr43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR3_2nd
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR41
ASA1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
NBCH_WD40
CFAP251_N
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Paf1
Beta-prop_RIG_1st
Helitron_like_N
UTP15_C
Motif
Other DBs
NCBI-GeneID:
118286031
NCBI-ProteinID:
XP_035466011
UniProt:
A0A8D3AXC1
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Position
15:complement(18021544..18037472)
Genome browser
AA seq
646 aa
AA seq
DB search
MAAHAGGSTQLLPCIFSPKPRQYLALCAQDGRLRVWNTDSKSLHQEYVPSAHLSATCTCI
AWGPCRTVKEGPKKKKRRSEAGQSEEKADLLAMGTAAGTVLIYSAAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKMRSKWKADRAAVTSLCVSHDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSTAVTTLCFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPQHIDLVTSNSKEEPVKLAVVCKDGQLHLFEHFLNGPCKKPLSPV
CTVQMSDTKVSPVPIPLLAAVLGADSRTVLLSYGNHLQPVMEKVEINTSERHVCLTRDVQ
TSLSLSMETTVSKVKTPIVNTKSKVLVPGLPGHQAPVKGTARGSEKRKKDTDTKEMSIAE
RLGEIDLSTVTSEKGAPKGMASLQTDNFAVLLVQGLESDDPNILNKVFQTRKENIIKKTV
ARLPLPAVLPLLEQITKRLQGHPFMAALMVRWLKAVIMHHTSYLSSLPDLVTQLGVLYHM
IESRVKMFQKLTKLHGKLYLLMTQVATSDSGNTVAEVDHTAKLVYEEESSDEDEASGDEG
LPGDDSDNWEEDEEVVMDEDENPDSRTESKANGEEDMEHENESEEE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcacgctggcggctccacgcagctgctgccttgcattttctcgcccaaaccg
cgacagtacttagcgctgtgtgcccaggatggccgacttcgcgtttggaacacagacagc
aaatcccttcaccaagagtacgtgccttcagcccacctgagcgccacttgtacctgcata
gcctggggaccatgccggacagtcaaggaggggcccaagaagaagaagaggcgatcggag
gcagggcagtcggaggagaaggcagacctgctggcgatgggcacagcagcgggaactgtg
ctcatctacagcgcagcaaagggggcactgcactgtaccctggatggaggccatagtgga
ggagtgaattgtgtccagtggcaccctgaagacagtttattatacagcggctcagatgat
acaaacattattgaatgggatctgcaaacggggaagatgcggagcaagtggaaggcagac
cgtgctgcagtgaccagtttgtgtgtgagccacgatgggaagctgctgctctcggctgga
cagataatcaagatgtgggacctggacaccaaggaggtttacaggaaattcacaggccac
tccacagctgtgacgaccctgtgcttcgccaccacacgacctcccgacagcaacggcctc
tatttcctatctggtgccgcacatgatcgactgctcagtgtatggcaagtacgagaagac
ggaaaggacaagaactcggtggtgtccttcacactgacggacgagcctcagcacatcgat
ctcgtcacctccaacagcaaggaagagccggtgaagctggcggtggtgtgtaaggatggc
cagttgcatctctttgagcactttttgaacggaccctgcaagaagcctttgtcacccgtg
tgtacggtgcagatgtcggacacaaaagtctccccagtgcccatccccctgctggcagcg
gtcctcggggccgatagtcggacagtcctgctgtcctacggcaaccacctacagcctgtt
atggagaaggtggagattaacacatcagagagacatgtctgtttgacccgggatgttcag
accagtctgtccctttccatggaaaccacagtttccaaggtgaaaaccccgattgttaac
accaagagcaaagtgttggtcccagggcttcctggccaccaagccccggtgaagggaacc
gctcggggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcggag
cgacttggtgaaattgatctgtctacagtcacctctgagaagggagctcccaaagggatg
gcctctttgcagacggacaactttgccgtgctgctggttcagggcctggagagcgacgac
cccaacatcctaaataaagtattccaaactcgcaaagagaatataataaagaaaacggtt
gctcggttacccctccctgctgttttaccattattggaacagatcaccaagaggctccag
ggccatccttttatggcggctctcatggtacggtggctcaaggcagtaatcatgcaccac
acatcatacctgtcatcgctgccggacctggtaacccagctgggagtgctgtatcacatg
attgagagcagagtgaagatgttccagaagctaaccaagctgcatgggaaactgtatctc
ctgatgacgcaggtggcgacaagtgacagtggtaacacagttgcagaggttgaccacaca
gcaaagctggtgtatgaagaggagtcatctgatgaagatgaggcctctggtgacgaaggt
cttcctggtgacgactctgataactgggaggaggatgaggaggtggtgatggacgaagat
gagaatccagacagcagaacagaatccaaagccaacggagaggaagacatggagcacgag
aatgagagcgaagaagaatga
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