Scophthalmus maximus (turbot): 118286200
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Entry
118286200 CDS
T09850
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118286200 (pnn)
03015 mRNA surveillance pathway
118286200 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118286200 (pnn)
03041 Spliceosome [BR:
smau03041
]
118286200 (pnn)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118286200 (pnn)
Spliceosome [BR:
smau03041
]
Complex C
Other components
EJC/TREX
118286200 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
118286200
NCBI-ProteinID:
XP_035466351
UniProt:
A0A2U9CJM8
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Position
15:17163392..17168794
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AA seq
693 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKHVDDNIRKLTGRDPNESRPGQIRRLGGPMAGVVGGGGGGG
GRGRGTNLLRRSLSEIGSAGPPAKQRDIEGALLRLAGDQRARRDARHDSDAEDDDDVKKP
ALQSSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSTDKQKRR
TEIEQKLEVQAETEKKKVESEKRELFEERRAKQTELRLLEQKVELAQLQEEWNGHNSRLV
KYIRTKTKPHIFYLPGKMCSATQKLFDDSTKKLNAVFEERREAFAEHLSKMESRPRRQPN
RDQDGNTAATGMDHRAEGKPAGQIVKVAGNQGHMEEDEEEEDEEEERGKEGDRKVKGEDG
ENEQMDGLQKVDEEVEKMELGEEGRKEEKKEREGEGVKGSEDQRGAGEKGQMEVSPGLEE
MEVEGEQGDRKKEEAGEPEGVQRPADLQKEKTQDTQSSEPPITSQEAPETSQQPQPSPSP
AAGEPAAQSSETRGTSPTPEPLTAPTVPGQNLILPGSKVQDSAAENQVAGGKTVEEASQE
LPDPQEAPSTTPAPSKEDGDSGRGRKKQKEPKKVRSHSNSSSSSSSGSSSSGSSSSSSSG
SSSSGSSSSSSSSSNSSSRSRSRDGGKRKRRPSDRGRKKGEDRSPRKSGGTSGGGRDSKG
SKERRKRRSDEGRGRSSRGDREHKDRDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgtggtgcggagcttgcaagaccagctcgaaaaagccaaggaaagcttgaaa
cacgtggacgataatatccgcaaattaaccggacgtgatcccaatgaatcgaggccgggc
cagatccgtcggctcggcggccccatggcaggcgtcgtaggaggaggaggaggaggaggt
ggtagaggcagaggaaccaacctgctcaggcgcagtctctcggaaataggaagtgccggc
ccccctgccaagcagagagacatcgaaggagctctgctgaggctggcaggggaccagagg
gccaggagagatgcgcgccacgacagcgacgccgaggatgacgatgacgtcaaaaagccg
gcgttgcagtcgtctgtcgtagctacctccaaggagcgaacgcgccgagacctcattcaa
gatcagaccatggatgagaagggcaaacagaggaatcggcgcatgttcggcctgttgatg
gggaccttgcaaaaattcaaacaggagtccaacgtctctacagataagcaaaagaggcgc
acagagatcgagcagaagctcgaagttcaggctgagacagagaagaagaaggtggagagc
gaaaagagggagctgtttgaagagaggcgagccaaacagactgagctgagactactggag
cagaaggtggaactagctcagctgcaagaggagtggaacggtcacaacagccgtctggtg
aaatacattcgcaccaagacaaagcctcacatcttctatttgcctggaaaaatgtgctcc
gccacacagaaactcttcgatgactccaccaagaaactaaacgctgtgtttgaggagagg
cgcgaggcttttgccgaacacctcagtaagatggagtcccgcccccggcgacagccaaac
cgcgaccaggatggcaacacggctgcaacaggaatggaccaccgagcggagggtaagccc
gcaggtcagatagtcaaggtggcaggtaaccagggacatatggaggaagatgaggaggag
gaagatgaggaagaggagagggggaaggagggggatagaaaggtgaagggtgaggatggg
gaaaacgagcagatggatgggttgcagaaggtagatgaagaggtggagaagatggagttg
ggtgaggagggtaggaaggaggagaagaaggaaagagagggggagggagttaagggcagc
gaggatcagaggggagcgggagaaaagggacaaatggaggttagtccagggttagaggag
atggaagttgagggggagcagggggacaggaaaaaagaagaggcaggagaaccagaaggt
gtacagaggcccgcagacctccaaaaggaaaagacccaagacacccagtcctccgaacca
cccataaccagccaagaggcaccagaaaccagtcagcaaccccagcccagtcccagtccc
gctgcaggggaaccagcggcacagtcctctgagacccgaggcacctctcctaccccagaa
cccctaactgcccccaccgtgcctggtcagaatctcatcctccctggctctaaggtacag
gactctgcagccgagaaccaggttgcaggggggaagacggtggaggaagcctcacaagag
ctgcctgatcctcaggaggcccccagcaccacgccggcaccctccaaggaggacggggac
agtgggagagggaggaagaagcaaaaggagccgaagaaggtccgcagtcatagcaacagc
tcctcctcttcgtcatctggctcgtcctccagcgggagctcctcctcttcctcctctggc
tcgtcctccagcgggagctcctcctcttcctcctcatcgtccaacagcagcagccgaagt
cgcagccgcgacggcggcaagcgcaagaggaggccgtcggacagaggcaggaagaaggga
gaagacaggagtccccgcaagagtggagggaccagtggagggggacgggactcgaaggga
tcgaaagagaggaggaagaggaggagcgacgaggggaggggccgatcgtcccgcggcgac
agggagcataaagatagagacaggaaggacaagaggcgctaa
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