Scophthalmus maximus (turbot): 118286331
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Entry
118286331 CDS
T09850
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118286331 (rtn1a)
03036 Chromosome and associated proteins [BR:
smau03036
]
118286331 (rtn1a)
Membrane trafficking [BR:
smau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118286331 (rtn1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118286331 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
118286331
NCBI-ProteinID:
XP_035466584
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Position
15:11399932..11422559
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AA seq
733 aa
AA seq
DB search
MSAQPGEELGSEGKWFGDDCERNGLFGNTTTRFDELREDLKPRGGEAADDLAQQFHPFQD
YVNRPPVAMETASTDNPMSGLLRKTMNDDGDVYTSLLSNQSFTSSREASYLSDDLKPSKS
STGSSALNDFSSDTYSFSSNTKMTSDLVDDMPKSLLGSDKRESYNYMDIIHGDERNDQHQ
APAHGLVDTSPAVRDLLGSYMDRDEDDEEEEEEEEENLGPALGSHSFPYVEEPSDEELSD
YRSYRNLGGTPQTASPVKITLTESQPRAEPQHPPPPPAIASERENVLSVGLQGVPTVTLS
EPEDDSPASTPNASPTQQEFPSHDMFKADTVKPAASNSSPGTKAGSKEHDGSSAESGDSE
IELVSEEPPKASSNPFAQPPKSKGSFSQPNNPFDTPPIAKGGFGLAGNHAPPTAYSILRE
EREAELDSDLFIESASEESPKRERSSSGPKQGVNPPSPLLHSVVPPHTTAEAVPAASLVT
EKVRTPVKTEEDRPNKPKPPTAAVPPEVRLEKPNPDDMLEQTTEGKGDREKPGASMILEG
FDKQKAIDLLYWRNVKQSGAVFSGVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKS
VLQAVQKTDEGHPFKSYLEVEIALSQDQISKYADKILLYSNTCMKELRRLFLVQDLVDSL
KFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVGK
IQAKIPGAKRKEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcagcccggtgaggagctcggttcggaggggaagtggttcggtgacgactgc
gagaggaacggcctgtttgggaacacgacgacccggttcgacgagctgcgtgaggatctg
aagccgagaggcggcgaggcggcggacgacctggctcaacaattccatcctttccaggac
tacgtgaataggcctcccgttgctatggaaactgcatctacagataatcccatgtctggc
ctgttgaggaagaccatgaacgatgacggtgatgtgtacacttccctgctgtccaatcag
agcttcacatcaagtcgggaagcctcctacctgtcggacgacttgaagccctccaagtct
tcaactggctcctctgccctgaacgacttctccagcgacacctacagcttcagctccaac
actaagatgacttctgacctggtggatgacatgccaaaatcactgctgggctcagacaag
agagaatcctacaactacatggacatcatccacggagatgagcgcaatgatcagcaccag
gcgcctgcgcacggcctagtggacacaagtccagctgttcgtgacttgctcggaagctat
atggacagagatgaggatgatgaggaggaagaggaagaggaagaggagaacctaggtcca
gcgctgggttcccactctttcccttacgtggaggagccctctgatgaagagctgtcagac
taccgctcctaccgaaacctcggtggtaccccccaaactgccagcccagtgaagatcacc
ttgaccgagtcccagcctcgagctgagccgcagcatcctcctcctcctcccgccattgcg
tctgagcgtgaaaacgtcctcagcgtgggtttgcagggggttccaactgtgacgctgtca
gagccagaggacgacagccctgcttccacgcccaatgcttcaccaacacagcaagaattc
ccttcccatgatatgttcaaggctgacacggtgaagcctgcagcttccaatagtagcccc
ggcacaaaggctggcagcaaggagcatgacggcagcagtgcagagtctggagactcggag
attgagctggtgtctgaggagcctccgaaggccagcagtaacccatttgcccagccacct
aaaagcaagggttctttcagccagcctaacaacccctttgacaccccccccatcgccaag
ggtggttttggcctcgctggcaaccatgctccacccacagcctacagcattctaagggag
gagagagaggcagagctcgacagtgatctcttcattgagtctgcgtcagaagagagccca
aagagagagaggagctccagtggccccaaacagggagtcaaccctccctctcccctgctt
cacagcgtcgtccctccccacacgactgctgaggccgtgccagccgcgtccctggtcaca
gaaaaggtcaggacaccggtgaagacagaggaggaccgccccaacaagcccaagcctccc
acggccgcagtgcccccagaggtacgactggagaagcccaatcccgacgacatgctcgag
caaaccactgagggcaaaggagaccgggaaaaacctggggcatcaatgattctggagggc
tttgataaacaaaaagcgattgacctgctctactggaggaatgtgaagcagtctggggcc
gtgttcagcggcgtgctactgctcctcttctccctgacccagttcagtgtggtcagcgtc
ggcgcctacttagccctggcggccctctccgcgaccattagcttcaggatctacaagtct
gtgctgcaagctgtgcagaagaccgatgagggacatcctttcaaatcctacctggaggtg
gagatcgctctatcccaggaccagataagcaaatatgccgacaaaatcctgctgtacagc
aacacctgtatgaaggagctccgcaggctgttcctcgtgcaagatctggttgactccttg
aagtttgctgttctgatgtggctgctgacctacgtgggcgctctcttcaacggcctgacg
ctgctcatcctagctgtggtctccatgttcaccatgcccgtggtctacgagaagcatcag
gcacagattgatcaatatgtgggactaatacggacccaggtcaactctgtggtggggaag
atccaggcaaagatccctggggccaagaggaaggaggagtag
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