Scophthalmus maximus (turbot): 118286342
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Entry
118286342 CDS
T09850
Symbol
nrxn3a
Name
(RefSeq) neurexin 3a isoform X1
KO
K07377
neurexin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118286342 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118286342 (nrxn3a)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
118286342 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
118286342
NCBI-ProteinID:
XP_035466605
LinkDB
All DBs
Position
15:complement(20854149..21024245)
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AA seq
1575 aa
AA seq
DB search
MDLIGFSIRLQVFLSACLGLEFLGTPGQWARYLRWDASTRGDLSFQFKTEAAESLMLYFD
DGGYCDFLQLSVVEGRLQLRFSIDCAETTVASDRRVDDGRWHFATLSRYNLRTVLVLDGQ
ARADAVRPQRQFMKIVSDLFLGGVPQDIRNGALTLPTARNMQPFTGTITDLKYGISQPLF
LGSLRVPLESEGWCTVNPCENGGTCSVVDGEPICDCSKTEYRGRFCSEEVIGNMPGLAHM
MTEQAKSKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSAD
YVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNTWHDVKVTRNLRQVTISVDGILTT
TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLAR
IVDPKMKIQGEVSYKCENVATLDPISFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLI
LFTHGKPQERKDAARSQKNTKVDFFAVELLDGSLYLLLDMGSGTIKVKATQTKVNDGAWY
HVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPTDRTNLILPTELWTAML
NYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKQPGKQCESYPCKNRGVCKEGWN
RFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPTIMHTEAEDVSLRFRSQRAYGLLM
ATTSRDSADTLRLELDGGRVKLTVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVR
RGKTYKLTVDDDVAEGQMVGDHTRLEFHNIETGIMTERRFVSSIPSSFIGHLQSLRFNGM
LYIDLCKNGDIDFCELNARFGVRSIIADPVTFKSKSSYLSLATLQAYTSMHLFFQFKTTS
PDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNLIKGKSDRALNDNQWHNVAITRDN
SNTHTLKVDATATSQSINGAKNLDLKGDLFIAGLGPGMYGNLPKLVASREGFQGCLASVD
LNGRLPDLLNDALFRSGQIERGCEGPSTTCQEDSCANMGICIQQWENYTCDCSMTSYTGT
QCNDPGTTYIFGKGGGLISFKWPANERPSTRTDRLTVGFSTSLKDGILVRIDSAPGLGDY
LMLHIQQGKIGVTFNIGTVDITVEESSTPVNDGKYHVVRFTRNGGNATLQVDNWSINEHF
PTGNSDIERYQMANKKIPFKYARPVEEWLQEKGRQLTIFNTQATVGIGGSDRGRPFQGQL
SGLYYNGLKVLNMAAEGNPNIKINGSVRLVGDVPSGAGSARSTAMPPEMSTNFVETTTMM
STTTTRKHRSSSTVQHAPDEIVSSAECSSDDEDLEECDTSQADKTLSTSGFEGGYKAHTA
KTFRANKPSVSRRSRTTATAILLTADQSRTTATSASTATLHNAPARQPAGKMIIRELKPQ
PNLVLLPLPTSFEVDSTKLRGPLITSPMFRNIPTAHPTEPGVRRVPGPSEVVRESSSTTG
MVIGIVAAAALCILILLYAMYKYRNRDEGSYQVDESRNYITNSAVQSNGAVMKDKQQSLK
GSNKKQKNKDKEYYV
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggatcttataggtttttctatcaggctgcaagttttcctcagcgcatgtctgggactg
gagtttttaggcacaccgggtcagtgggcacgctacctccgctgggacgccagcacccgc
ggtgacctcagcttccagtttaagaccgaggccgcagagtcgctgatgctgtatttcgat
gatggaggctactgtgactttctgcagctgtcggtggtggagggccggctgcagctgcgc
ttcagcatcgactgtgccgagaccacagttgcgtccgacagacgggtggatgacggcaga
tggcactttgccaccctgagcaggtataacctgcgcactgtgctggtactggacggccag
gccagggctgacgcagtgcggcctcagcgacagttcatgaaaatagtcagcgacctgttc
ctgggtggcgtgcctcaggatatccgcaacggtgcgctcacgctgccgacagcgcgaaac
atgcagcccttcacgggcacaattacagacctcaaatatggcatctcacagcccctgttt
ctcggaagccttcgggtgcccctggagtcagaaggatggtgcactgtgaacccatgtgag
aatggtggtacatgctcagtggtggatggagagcccatctgtgactgctccaaaacggag
tacaggggccgcttctgcagtgaagaggtcatcggtaatatgccaggccttgcacatatg
atgacagaacaagctaaaagcaaagccagggaagagaacgtggccactttccgaggctcg
gagtacttctgctacgatctctcccagaaccccatccagagcagcagtgatgaaatcaca
ctctccttcaagacgtggcagcgcaacggccttatccttcacactggcaagtcagctgac
tacgtcaacctggctctgaaggacggtgctgtctctcttgttatcaacctcggctctgga
gcctttgaggccattgtggagcccgtcaatgggaagttcaatgacaacacgtggcatgat
gtcaaagtgactcgaaacctccgacaggtgacgatatccgtggacgggatcctgaccacc
acgggttacacccaggaggactacaccatgctgggatcggatgacttcttctatgtggga
ggaagccccagcaccgctgacctgccggggtctcccgtcagtaacaacttcatgggctgt
ctcaaggaggtggtgtataagaacaacgacatccgacttgagttgtcccgcctggctcga
atcgtggacccaaagatgaaaatccagggggaggtgtcctacaagtgtgagaacgtggcc
accttggaccccatctccttcgagactcccgaggcctacatcagcctccccaagtggaac
accaagcggatgggatccatctcttttgatttccgcacgaccgagcccaatggccttatc
ctcttcacacatgggaaaccccaggagcgcaaagatgctgctcgcagccagaagaacacc
aaggtggatttctttgcggtagagctgctggatggcagcctgtacctgctgttggacatg
ggctcagggactatcaaggtgaaggccacccagacaaaggtgaatgatggtgcctggtat
cacgtggacatccagagagacggacgctcaggcaccatctctgtgaacagcagaaggact
ccattcacagccagcggtgaaagcgagattctggacctggagggcgacatgtacctgggg
gggctgcccacggaccgcaccaacctcatcctgcccactgagctgtggacggccatgctc
aactacggctacgtgggctgcatccgcgaccttttcattgacggccggagcaaggacatc
cgtcagattgctgaggcacaaaatggagctggcatcaaaccctcgtgcaacaagcaacct
ggcaagcagtgtgagagctacccatgcaagaaccgaggcgtctgcaaagaaggctggaac
cgattcatctgtgactgcaccggcactggctactggtcacgcacctgtgagagagaggct
tccatcctttcctacgacggcagcatgtacatgaaggtggtgatgccaactatcatgcac
accgaggcggaggacgtctccctgcgtttccggtcccagcgggcctatggcctcctcatg
gccaccacctcccgagactcagccgacacgctcaggctggagttggacgggggtcgcgtc
aaactcacggtcaacctagactgtatcaggataaactgtaactccagcaagggaccagag
accctgtatgccggacaaaaactcaatgataatgaatggcatacagtgcgtgtggtgcgt
cgcggcaaaacctacaagctaacggttgacgatgatgttgcagaaggccaaatggtgggc
gaccacactcgtcttgagttccacaacatcgaaacgggcatcatgacagagcgccggttt
gtttccagcatcccgtccagctttattggtcacctgcagagcctcagatttaacggcatg
ctctacatcgacctgtgcaagaacggtgacatcgatttttgcgagctcaatgcccgcttt
ggggtccgctccataattgctgaccctgtcaccttcaaatccaagagcagctacctgagc
ctggccaccctgcaggcctacacgtccatgcacctcttcttccagttcaagaccacctcc
ccagatggcttcatactgttcaactctggagatggcaatgattttatcgctgtagaactg
gttaaaggatacatccactatgtctttgacctcggaaatgggccaaacctcatcaagggc
aaaagtgacagggcgctgaacgacaaccagtggcacaatgttgccatcacccgagacaac
agcaacacccacacactgaaagtagatgctacagccacgagtcagagtatcaacggggcc
aagaatctggacctgaaaggcgatctgttcatcgcaggactgggtcccggcatgtacggc
aacctgcccaaacttgtggcctccagagaaggattccagggctgcttggcatcggtggac
cttaacggtcgcctgccggatctcctcaacgatgccttgtttcgcagcgggcagattgag
cgtggatgcgaaggtcccagcaccacctgtcaggaggactcctgtgccaacatgggcatt
tgtatccagcagtgggagaactacacctgtgactgctccatgacctcctacaccggcaca
cagtgcaatgaccctggaacaacgtacatctttgggaaaggaggaggcctcatttcattc
aagtggccggccaatgagagaccaagcaccaggacggacaggctgaccgtcggcttcagc
acctccctgaaagacggcatcctggttcggattgacagcgctcctggtctgggggactat
ctcatgctgcacatacaacaagggaaaattggagtgacattcaacattggcacagtggat
atcactgtggaggaaagcagtaccccagtgaatgatgggaagtatcatgttgtccgtttc
accaggaatggtggcaatgctacgctgcaggtggacaactggtcaatcaatgaacacttt
ccaacagggaacagcgacattgaacgctatcaaatggccaataagaaaattcctttcaaa
tacgccagaccagtagaagagtggcttcaagagaaaggacggcagctgacaattttcaac
actcaagccaccgtcggaattggtggtagtgatcgtggccgcccatttcagggtcaactc
tcaggcctttactataatggcctcaaggtgttgaacatggctgctgagggtaaccccaac
atcaagattaacggcagtgtgaggttggtaggtgatgtgcccagtggggcaggctcagcc
aggagcacggccatgcctccggagatgtccacaaactttgttgagactactaccatgatg
tccaccactaccacgcggaaacacaggtcctcttcaactgtacagcacgcgccagatgaa
atagtgtcatccgcagagtgttcgagcgatgacgaagacctggaggagtgtgacactagc
caagcagataagaccttgtccacgtcaggctttgaaggtggctacaaagctcacacggcc
aagacttttagagctaacaaaccttcagtctccagacgcagtaggactaccgctaccgcc
atactactaaccgccgaccagagccgcaccaccgccacctctgcctccaccgcaaccctc
cacaatgctccggccagacagccggctggcaaaatgattatccgcgagctaaaaccccag
cccaacctagtgttgcttccattgcccacatcctttgaggtagacagcaccaagctgagg
ggcccattaataacctccccaatgttccgtaatatacccacagcacaccccacagaaccc
ggcgtcaggcgagttccagggccctcggaagtggtccgtgaatctagcagcaccaccggg
atggtcatcggaatagtggcagccgctgccctgtgcatcctcatcctcctgtatgccatg
tataagtacaggaacagggatgaaggctcctaccaggtggacgagagcagaaactacata
accaactcagctgtgcagagcaatggcgctgtgatgaaggacaaacagcagagcttgaaa
ggcagcaacaagaaacagaaaaataaggataaggagtattacgtgtga
DBGET
integrated database retrieval system
