KEGG   Scophthalmus maximus (turbot): 118286393
Entry
118286393         CDS       T09850                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04510  Focal adhesion
smau04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118286393 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118286393 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 118286393
NCBI-ProteinID: XP_035466715
LinkDB
Position
12:complement(22422947..22443582)
AA seq 1783 aa
MSLITLIHITTTLALWCPVGGLLMPEFADVCTEGSCYPATGDLLIGRAHRLTASSTCGLE
RPERFCIVGHLEEEKKCFVCDSNEMYDDDANQVSHTVENVVTTFAHNRLKTWWQSENGVE
NVTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSVDFGKTWQVYRYFAFNCESSFPGVST
GPMVKVDDIICDSHYSDFEPSTEGEVIFRVLDPAYPIKDPYSLRIQNMLKITDLRVNFIR
LHTLGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGAPTGTEGMVHGRCV
CNHNTVGLNCERCQDFYHDLPWRPAEGRNTHACKRCECNQHSASCHFDLAVYVTTGNMSG
GVCDDCQHNTVGRQCEQCAPFFFQHPDRDLRDPSVCEPCNCDPSGSLEGGLCDSRTDVAA
GLISGQCRCKALVEGERCDHCRQGHHGLGEGPQGCLPCTCSPLGTLPGGNSCDPESGKCF
CKRLVDGHNCDQCLPQHWGLSNDMDGCRACDCDQGGALNNNCDPHSGQCVCREHMFGRRC
DQVESGFYFVALDHYTYEAEDAEHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFN
INNIPDSMDYDVLIRYEPQLPEQWEKVNIRVQRPVFNPPNYSSLCGNSVQSGDEQSISLP
PGSRHVLLVRPVCLETGQNYTLRLSLPLYSSLSDMQSPYTLIDSLVLIPRVREMDMFHGV
DGDGAWDTFQRYRCLESSQSVVKSPMTDICHDYIFSVSALLHDGAMACQCDPQGSLSAVC
EPSGGQCQCRPNVVGRNCDHCAPANFLFGPAGCRPCDCDPRGSESAFCHEATGQCECVPG
ATGRQCSHCLPGFWGFPQCRPCHCNGHSDYCHPQTGECQGCRDFTGGHHCERCLEGYHGD
PELGSGGHCRPCMCPDGPRSGRQFADSCYLLAYSNQLVCVCSAGYKGARCDECAPGYFGN
PLVPGGRCMPCQCNSNIDMHDPGSCDARTGACLKCLHHTDGHACQQCKPGYYGEAAAQSC
RKCMCYSEGTEPEACSSPDGCECDRHTGQCPCRPNVVGQNCDRCVADTWNLAGGTGCQRC
DCDRVHSLGSSCDEVTGRCSCRPGFGGRTCQECRELFWGDPEVKCHACDCDPRGISSEQC
HSATGQCACVEGVSGARCDECARGYQGEFPDCERCHQCFASWDAVVGELTNQSRRLEAQV
TEILTSGVTAPYKELIGSLEKNSKAVREIVEGNPAAVQLELTQELMHEISGLMSYLHGKL
NTTEETLDLFHNDANSTDAKLDALSNEANRLERSVQELRQQVYDAKNANLQGAMDTITAA
HAQSATAELRANASVSDPGNTAEQSAAVRRATEEKLSGGQKEFDRRHQKNSQKLEKLSGE
LDKFDLSPLGEKTCGGAAEGAGCAGSPCGGLGCVGEDGAPRCGGEGCEGVVATSHTAVKS
AKDLDREILAAMQEVDKLSRMVWEANVRANEAKANAMEVLVKSNRSKERVEQSNEQLRNL
IKDIRDLLTNEKADVSVIETVANEVMALEMPTSPEKLQELTREIREKVGTLSSVETILNQ
SAEDIRAAEALLNQAKAASEQASSMKERAEVVKAALDESERAQSVAMGAIQLAQNNTNGT
LDLLISVESETASSELKLGNTTGRLLQLEREVGLLRQNNLEVNRLAETADWIMDQARLEA
EEAQQEFDGEVKERLEAVEDLVEDKGESVLQARRKADELRQEAKDLLAESSSKMQRLGEL
EGDYEANQRVLEAKAAELVELEQTVRRILEEISYKVTLYSTCV
NT seq 5352 nt   +upstreamnt  +downstreamnt
atgtcgctcatcaccctcatccacatcacaacaactttggccctgtggtgtcccgtcggc
ggcctgctgatgccggagtttgcggatgtctgcaccgagggcagctgctacccggccaca
ggggacctgctcatcggccgtgcgcacaggctcactgcctcctccacctgcggcctggag
cggcccgagcgcttctgcatcgtgggacatctggaggaggagaagaaatgtttcgtgtgc
gactccaacgagatgtacgacgacgacgccaaccaggtcagccacacggtcgagaacgtg
gtcaccaccttcgcccacaaccgcctcaaaacctggtggcagtcggagaacggcgtggag
aacgtgaccatccagctggacctggaggccgagtttcacttcacacatcttatcatgacc
ttcaagacgttccgtccggctgccatggtgatcgagcgctcggtggacttcgggaagacg
tggcaggtttaccgttacttcgccttcaactgcgagtcctcgttcccgggcgtgtccacc
gggcccatggtcaaagtggacgacatcatctgcgactcccactactcggacttcgaacct
tccaccgagggagaggtgatattccgggtgctggaccccgcctacccgatcaaggacccc
tacagcctgaggatacagaacatgctgaagatcaccgacctccgcgtgaacttcatcagg
ctccacacgctgggcgacaacctgctggactcccgcgacgaggtgacggagaagtactac
tacgccctctacgacatggtcgtccgcggcaactgcttctgctacggccacgcctccgag
tgcgccccgatggacggcgccccgacgggaaccgagggcatggtccacggtcgctgtgtg
tgtaaccacaacaccgtggggttgaactgcgagcgctgccaagacttttaccacgacttg
ccctggagaccggcggagggacgaaacacccacgcctgcaagaggtgcgagtgtaaccag
cactcggcctcgtgccacttcgacctggccgtgtacgtgacgacgggcaacatgagcggc
ggcgtgtgcgacgactgtcaacacaacacggtgggccgacagtgcgagcagtgcgcgccg
ttcttcttccagcaccccgaccgagacctgcgggaccccagcgtctgcgaaccgtgtaac
tgcgacccgtccgggtccctggagggcggactgtgcgactcgcggaccgacgtggccgcc
gggctgatctcgggccagtgtcgctgcaaagccctggtggagggcgagcgctgcgaccac
tgcagacagggacaccacggcctgggagaggggcctcagggctgcctgccgtgcacctgt
agcccgctgggcactctgccgggaggaaactcctgcgatccagagtcggggaaatgcttc
tgcaaacgcctcgtcgacggacacaactgcgatcagtgtctgccacagcactggggtctg
tccaacgacatggacggctgcagagcgtgtgattgtgaccagggcggggctctgaacaat
aactgtgaccctcactcgggacagtgcgtgtgcagggagcacatgttcggacgccgctgc
gatcaggtcgagtcgggcttctacttcgtcgccctcgatcactacacctacgaggccgag
gacgccgagcacggacccggtgtgacggtggtgccgaggccttaccctctggatcgcagt
cccacgtggaccggcatgggcttcgtcaacgtgccggaaggagcctacctggagttcaac
atcaacaacatcccagactccatggactacgacgtcctcatccgctacgaaccgcagctg
cccgagcagtgggagaaggtgaacatccgggtgcagcgtcccgtcttcaaccctcccaac
tactccagcctgtgcggcaactccgtccagagtggcgacgagcagtccatctcccttcca
cctggatccagacacgtgttgctggtgaggcccgtgtgtttggagaccgggcagaactac
accctccgcctcagtctgccgctctactcgtcgctcagcgacatgcagagcccgtacacg
ctcatcgactccttggtgctgattccccgggtgcgggagatggacatgttccacggcgtc
gacggcgacggggcgtgggacacgttccagcgctaccggtgtctggagagcagccagagc
gtcgtcaagagccccatgacggacatctgccacgactacatcttcagcgtctccgctctg
ctgcacgacggcgccatggcatgccagtgcgacccccagggttcgctcagcgccgtgtgc
gagcccagcggaggccagtgtcagtgtcggcccaacgtcgtcggcaggaactgcgaccac
tgcgcccccgccaacttcctgttcggccccgccggctgcaggccttgcgactgcgaccct
cggggctcggagagcgccttctgccacgaggcgaccggccagtgcgagtgcgtgcccggg
gccacggggcgccagtgctcccactgcctgccgggcttctggggcttcccgcagtgtcga
ccgtgccactgcaacggccacagcgactactgccacccgcagaccggcgagtgccagggc
tgcagggacttcaccggcggacaccactgtgagaggtgcctggagggttaccacggcgac
ccagagctgggttcgggtggccactgccgcccctgcatgtgccccgacggcccgcgcagc
ggacgccagttcgccgacagctgttacctcctggcctactccaaccagctggtgtgtgtg
tgcagcgctggctacaaaggtgccaggtgcgacgagtgcgcccccggttacttcgggaac
cccctggtgcccggcggccgctgcatgccctgccagtgcaacagcaacatcgacatgcac
gacccggggtcctgcgacgcccgcacgggcgcctgcctcaagtgcctgcaccacaccgac
ggccacgcgtgccagcagtgcaaaccgggctactacggcgaggccgccgcgcagagctgc
aggaagtgcatgtgttactcggagggcaccgaacctgaggcgtgttcgtcccccgacggg
tgcgagtgcgaccggcacaccggtcagtgtccctgccggcccaacgtggtcgggcagaac
tgcgaccgctgcgtcgccgacacgtggaacctcgccggcgggacgggctgccagcgctgc
gactgcgaccgcgtccactccctcggctcctcctgcgatgaggtcacgggacggtgctcg
tgcaggcctggtttcggcggcaggacgtgtcaggagtgcagggagctcttctggggcgat
ccggaggtcaaatgtcacgcgtgtgactgcgaccctcgcgggatctccagcgagcagtgc
cacagcgccacgggtcagtgcgcgtgcgtggagggtgtgtccggcgcgcggtgcgacgaa
tgcgccaggggctaccagggcgagttccccgactgcgagcgctgccaccagtgcttcgcc
agctgggacgccgtggtcggcgagctgaccaatcagagccggcgcctggaggcgcaggtg
acggagatcctgaccagcggcgtgacggcgccgtacaaggagttgatcggcagcctggag
aaaaactccaaggccgtgagggagatagtcgagggcaacccggcggcggtgcaactagag
ctgacgcaggagctcatgcacgagatcagtggtttgatgtcctacctgcacgggaagctg
aacacgacagaggagaccttggaccttttccacaacgacgccaactccaccgacgccaag
ctggacgcgctgagcaacgaggcaaaccggctggagcggagcgtccaggagctgaggcag
caggtgtacgacgccaagaacgccaacctccagggtgccatggacaccatcacggcagcg
cacgcgcagtccgcgacggcggagctgcgcgccaacgcctccgtcagcgaccccggcaac
acggcggagcagtccgctgcggtacggagagccacggaggagaaactgagcggcggccag
aaggagtttgaccgcaggcaccagaaaaactcgcagaagctggaaaaactgtccggcgag
ctggacaaattcgacctgtcgccgctcggcgaaaagacgtgcggcggtgcggctgaaggc
gccggctgcgccggctccccctgcggcgggttgggttgtgtcggcgaggacggagctccc
cggtgtggaggagagggatgcgagggcgtcgtcgcaacctcgcacaccgctgtgaaatcc
gctaaggacctggacagggagatcctggcggcgatgcaggaggtggacaagctctccagg
atggtgtgggaagccaacgtgcgtgcgaacgaggccaaggccaacgcgatggaggtgctg
gtcaaatccaaccgcagcaaggagagggtggagcagagcaacgagcaactgcgcaacctc
atcaaagacatacgtgacctcctcaccaacgagaaggcggacgtgtccgtgatcgagacg
gtggccaacgaggtgatggccctggagatgccgacctcgcccgagaagctgcaggagctg
acgagggagatccgggagaaggtgggcaccctgagcagcgtggagaccatcctgaatcag
agcgccgaggacatcagggccgccgaggcgctgctgaatcaggccaaggccgccagtgag
caggcgtccagcatgaaggagagggcggaggtggtgaaggcggcgctggatgagagtgag
cgcgctcagagcgtcgccatgggcgccatccagctggcccagaacaacacgaatggaact
ctggacctgttgatctccgtggagtcggagacggcctcgtcggagctgaagctcgggaac
actacgggtcgcctgctgcagctggagagggaggtcggcctgctgcgacagaacaacctg
gaggtgaaccggctggcggagacggccgactggatcatggaccaggcccgactggaggcg
gaggaggcccaacaggagtttgacggggaggtgaaggagaggctggaggcggtggaggac
ctggtggaggataagggcgagtcggtgctgcaggcgcggaggaaggcggacgagctgcgg
caggaggccaaagacctgctcgcggagagcagcagcaagatgcagagactcggagagctg
gaaggcgactacgaggccaaccagcgcgtcctggaggccaaagccgcggagctggtggag
ctggagcaaactgtccgccgcatcctggaggagatcagctacaaagtgactctgtacagc
acctgtgtgtga

DBGET integrated database retrieval system