Scophthalmus maximus (turbot): 118286398
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Entry
118286398 CDS
T09850
Symbol
eri1
Name
(RefSeq) 3'-5' exoribonuclease 1
KO
K18416
3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118286398 (eri1)
03036 Chromosome and associated proteins [BR:
smau03036
]
118286398 (eri1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118286398 (eri1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
118286398 (eri1)
BRITE hierarchy
Motif
Pfam:
RNase_T
SAP
Pox_D5
DUF4971
Motif
Other DBs
NCBI-GeneID:
118286398
NCBI-ProteinID:
XP_035466728
EnsemblRapid:
ENSSMAG00025004835
LinkDB
All DBs
Position
12:22419507..22422538
Genome browser
AA seq
348 aa
AA seq
DB search
MDEHKENIHAEEDVNVKMSATREEEEEKAKSCSSRICPEAEPAAPQVSVSPSQSNSDFSH
PVYKEISLANGHINRMSMDQLRVKLAELKLDTRGVKDVMKKRLKNHYKRQKLLQSAAEGG
PTDTYYDYICVVDFEATCEENNPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKPESNPT
LSDFCVKLTGITQKMVDDADLFPDVLRRVVAWLQERELGTKYKYAMLTDGAWDMSKFLNI
QCRISDIKYPPFAKKWINIRKSYGNFYKVPRTQTRLSTMLEKLGLTYEGRPHSGLDDSRN
IARIAVRMLQDGCQLRVNERMHGGQLLSVPSSAPLEGAPAPRNPRARE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcacaaggagaacattcacgccgaggaggacgtgaacgtcaagatgtctgcg
accagagaagaggaggaggagaaggcgaagtcttgcagcagcaggatttgccccgaggcg
gaacccgccgcccctcaggtgtccgtgtccccgtcccagtccaacagtgacttcagtcac
ccggtttacaaggagatctctttggccaacggacatatcaaccgcatgtccatggaccag
ctgcgggtcaagttggccgagctgaagcttgacacgaggggagtgaaggacgtgatgaag
aagaggctgaagaaccactacaagaggcagaagctgctgcagtcggcggccgagggcgga
cccaccgacacctactacgactacatctgcgtggtggacttcgaggccacgtgcgaggag
aacaacccgtccgacttcctccacgaaatcatcgagttccccatggtgctcatcaacacg
cacacgttagaaatcgttgacacttttcaggaatatgtcaaacctgagtcaaacccgacg
ctttcagatttctgtgtgaagttaacggggataacgcagaaaatggttgacgacgccgac
ctgttcccagacgtcctgcggcgagtcgtggcctggcttcaggagagagagctcgggacg
aagtacaaatacgccatgctgactgacggagcctgggacatgagcaagttcctcaacatc
cagtgtcgtataagcgacatcaagtatccgccatttgcaaagaagtggatcaacatacgg
aaatcatatgggaacttctacaaggtcccgcgcacgcagacgaggctgagcaccatgctg
gagaagctgggcctgacgtacgagggccgcccccactcggggctggacgactcgcgcaac
atcgcccgcatcgccgtgcgcatgctgcaggacggctgccagctgcgcgtcaacgagcga
atgcacggcggccagctcctctccgtgcccagctcggcgcccctggagggagcgccggcg
ccgcgcaacccgcgcgccagagagtag
DBGET
integrated database retrieval system