Scophthalmus maximus (turbot): 118286460
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Entry
118286460 CDS
T09850
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04020
Calcium signaling pathway
smau04080
Neuroactive ligand-receptor interaction
smau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118286460 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118286460 (grin3ba)
04082 Neuroactive ligand signaling
118286460 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118286460 (grin3ba)
Ion channels [BR:
smau04040
]
Ligand-gated channels
Glutamate (ionotropic)
118286460 (grin3ba)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
118286460
NCBI-ProteinID:
XP_047183173
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Position
15:6429297..6499208
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AA seq
1338 aa
AA seq
DB search
MVSLSGLWTYCLAPGRPHLLFLSAGALLLLQLLTAFSSPDSCFPHPQPCHILARIGHTVR
LGALLPTRQPVRIQNALNRALASLRHQSAGADSSSTTTSQTPPLLPYNLSLEMVARSPAA
GDPESLSRSACQDLVVRGVSAVLAFPRSREELIQVEFLSSFLEVPFISILEDTEPLVTKN
RFHLQMSARVPPSTLGSLLLAVLQGGEEDRDRASRGEGSWGGAAVVCPGWEEGGEGLLSH
LQRHSGSNWHLWDVINLTRITGGGDRRGEASEERREDQMEEEALKILSTRFVRSPSPISS
VLLLGSDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKP
ISFYIRDALQLIGRAVTAATMVRPDLALIQNMVNCYDKPNRHEVPSSGQYLARFLSNTSF
TGGTGLIQVDAGYSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGG
FGRNQGQGLGAGVRGGDGQGDGNIGGRWRPGLSVEGHRLRVVTLVEHPFVFTREVDEDGL
CPAGQLCLDPRTNRTDIIHSLFNQLHNPNATVAEWGGKDLPEDLRKCCYGYCIDLLEKLA
EDMGFTYDLYIVGDGKYGASSGTGRWTGLVGDLLSGTADMAVTSFSINSARSRVIDFTSP
FYSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHG
RNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAV
MVGEKTFEQVSGIHDDKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRYNQPTTPN
GVHMLKTDPPSLDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRNM
SEFVSRYKSEGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALL
TLAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTGLDQNPSSCISE
NCTLHRKHHHPPPPPSPPTSLPASTTAGDTSNSSPSHEPKEKRVHFDLDTLHSYRLRTHT
ASVRGRPGMVGRPGLGLGGFGLGNLGSFTSPPQISLHVNGGPVSALASTGLVLSPLGSRA
AQTSLWEGELQELQGKIEIFRSQLREALARRAEIQSSLERERSGHVRRDTSLEREKDRQR
IQTINTDRSSSTQSKLPERDRTSQLQTLNNQQTGRANQSGGPGTLEHGRSSQLNTVNSLD
RGRAIQLRSVNTLAGERTVQSRTSTSLERSRVNQPGAGNATVHSRNTSSLDRQKANLSRT
LNTLERTKANQSGVNSGT
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctctctggactctggacctactgcctcgcccccgggagaccccatctcctc
ttcctctccgcgggagcgctcctgctgctccagctgctgaccgccttctcctccccggac
tcctgcttcccgcacccgcagccgtgccacatcctcgcccggatcggacacaccgtgcgc
ctcggcgcgctcttgccgacccgccagccggtacggatacaaaacgcgctcaaccgcgcc
ctggccagcctccggcaccagagcgccggggcggactcctcctccaccaccacttcccaa
acacccccgctgctgccctacaacctgagcctggagatggtggcgcggtcgcccgcggcg
ggggacccggagtcgctgtcccgtagcgcctgccaggacctggtggtcaggggggtgtcc
gccgtgctcgccttcccccgctccagggaggagctgatccaggtggagttcctctcctct
tttctggaggtccccttcatctccatcctggaggacacggagccccttgttaccaagaac
cggttccacctgcagatgtcggcccgtgtgcctccatcaactctgggcagcctgctgctg
gcagtcctgcaggggggagaagaggacagggaccgagcgagccggggggaggggagctgg
ggaggagcggccgtggtctgccccgggtgggaggaagggggcgaggggctgctgtctcac
ctacagaggcacagtggttccaactggcatttgtgggacgtcatcaacctgacccgcatc
acggggggcggagataggaggggggaggccagcgaggagaggagggaggatcagatggag
gaagaggctttgaagattctctccactcgtttcgtgcgctccccctctcctatctcctct
gttctcctcctgggctctgaccctgagtgtctctcctctgtcctgcgggccgctcagcgc
ctcgctccgtcgctgccagcgctgcagtggatcatgggataccccttgtctcccgattcg
ctgcacactctcggaggtccacttggactgctcgcctacggggaggttggccgcaagcca
atcagcttctacattcgggatgctttgcagttgattggccgagcggtcactgcggcaacc
atggtgaggccggacttggccctgatccagaacatggtgaactgttatgacaaaccaaac
cgccatgaggtgccctcttcaggacaatatctggccagattcctctccaacacttccttc
actggtggcaccggcctgatccaggtggacgctggctactcccgggtcctctcctcccag
ctgttccatgtatggagtctgaagaggggtgctctgggccagccggcctgggtcactgta
ggccagtggacccgaggccgactggagttagagggagggatcctcgggctggtgggaggg
ttcgggagaaaccaaggacaaggtcttggggcaggggtgaggggaggggatggccagggg
gacggcaacattggaggacgctggaggccaggactctctgtcgaaggacaccgcctgcgt
gtggtaacgctggtggaacatccgtttgttttcacacgggaggtggacgaggacggattg
tgtccggcgggtcagctctgtctggaccccagaaccaaccggactgacataatccacagc
ctcttcaaccagctacacaacccaaacgccacggttgcagagtggggtggcaaggaccta
ccagaggacctcaggaagtgctgctacgggtactgcattgacttgctagaaaagctggca
gaagacatgggcttcacctatgacctctatattgtgggagacgggaagtacggggcgtcg
agcgggacaggacgatggacggggctggtcggagacctgctcagcggaacagccgacatg
gctgtcacctctttttccatcaattctgccaggagcagagtcatcgatttcacctcgcca
ttctactccaccagcctgggaattctggttcgcagccgggacactgcagctcctattgga
gccttcatgtggccccttcactggtccatgtgggtgggcatctttgtcacgctgcatctc
accgcactcttcctcaccttgtacgagtggaacagccccttcggcatgacaccacatggc
aggaacaggctgcgtgtgttctcctactcctccgccctcaatctctgctatgccatactg
tttggacgcaccgtcgccaccaagactccaaaatgctggacaggtcgcttcctgatgaac
ctgtgggccattttctgcttactggtgctgtccagttacaccgccaacctagcggccgtc
atggtcggggagaagaccttcgagcaggtctcggggatccatgacgacaagctgcaccat
ccctccctgggctttcgttttggcacggtgagggagagcagtgccgaggattacatgaag
aagagtttcccagagatgcacgactacatgagacgctacaaccagcccaccaccccaaat
ggggtacacatgttaaagacagatcctccttccctggatgcgttcatcatggacaaagcc
ctgttggactttgaggtctccatcgacgccgactgcaaactgctcaccgtggggaagccg
ttcgccatcgaaggctacggcatcggcctgccccagggctcccccctgacccgcaatatg
tccgagttcgtgagtcgttacaagtcggagggcttcatggacatgcttcacgacaaatgg
tacaaggtcgtgccctgcgggaagcgagtctttgccgtcaccgagactctacagatgggg
atccagcatttctccggcctgttcgtgctgctgtgtatgggggtgggcggagccctgctg
actctggccggcgaacacaccttctatcacctggtcatcccgcgactccgacgcacgcac
acactgcagtactggctgcacaccagccagaaaatccaccgtgccctccacaccacgtat
gaggacgtagggaaggagctgaccggcctggaccaaaacccgtcctcttgtatctcagag
aactgcaccctacaccggaaacatcatcatcctcctccccccccatctccccccacatcc
ctcccagcttccactacggctggagacaccagcaactcctcgccgtcccacgagcccaag
gagaagcgtgtgcactttgacctcgacaccctgcacagctaccgccttcgcacgcacacg
gcctcggtgcgcggccggcccgggatggtcggccgcccggggctcggcctcggagggttc
ggtctgggcaacctggggagttttacgtccccgccgcagattagcctccacgtcaacggg
ggccctgtctcggcactggcctccacgggcttggtgctctctccgctggggagcagggcg
gctcagaccagcctgtgggagggggagctccaggagctgcaggggaagatcgagatattc
cgcagccagctgagagaggctctggccaggcgggcggagatccagagcagcctggagcga
gagaggagcggacacgtgcgcagggataccagtctggagagggagaaggacagacagagg
atacaaactataaatacagacagaagtagcagcactcagtcgaaactccccgagagagac
aggaccagccaactgcagaccctgaacaatcaacagaccggaagggcgaaccagtcaggt
gggcctgggactctggagcacgggaggagcagccagttaaacacagtgaacagtctggac
agagggagagccatccaactgcgctccgtcaacactttggcgggagaaaggactgtgcag
tcgcgcacctccaccagtttggagcgcagtcgggtcaaccaaccgggcgccgggaacgca
actgtccactcacggaacacttccagcctggacaggcagaaggctaacctgtcgcgcact
ttgaacactttggagaggacaaaagccaaccaatcaggtgtcaacagtggaacttga
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