Scophthalmus maximus (turbot): 118286632
Help
Entry
118286632 CDS
T09850
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118286632 (ubr1)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118286632 (ubr1)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
118286632 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
118286632
NCBI-ProteinID:
XP_035467098
LinkDB
All DBs
Position
15:11696231..11713412
Genome browser
AA seq
1754 aa
AA seq
DB search
MAEGEKSPDGLDLSKEWLQAADSRAELLLYLKEQVPQIFCLKKESSPQEREEIMQSLLFH
PLECFLFGEDPQEGLEKLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGAATAMVTDECVLEPELYERAEK
LFRVLLHYLTDFLVWEENFELSAELQPRQKDNAYYCVLYNDEHHSYDHVIYTLQRSVNCD
QTEAQTHTQLIDKEGRRAVKRGTLRSCQQAKDLIRSNSEHISLQPLRVEILHAAIMAHQT
FALRLGSWFQKIISYSAGFRQAFCQVALEPGTDGDRPCLISRLMLHDARMYKGARKIVHE
LIFCSMLLETEFKRQFAFEFTKHFKQLQKDFIHDDHDRSISITALSVQIFTVPTLARQLI
EEGNVIKVVVDTVMELLREHLDDNNRFFFLGYNSDKFSRIQVIFHDLRYILISKPSTWTD
ELRRQFLEGFKVFLGFLKCMQGMEEVKRQFGQHIAVEPEWEAGFSLQIQLRHILAMFQDW
CSSDPEILLLAFKECHKDLMQCNHQPFRREAIDFYMCKHILHVRPYKVSQEPVSIHLPIS
RLLAGLYVLLCKTGAIGHLDNPEIYDYTQLVEHPLRCVVLAAQVSAEMWRRNGLSLVSQV
YYYQDVKCRDEMYDKDILMLQIAASKMDPNHFLMLILLRFELFDYFNGSCSSKDQDELIQ
WNRLTEEMLYLLIVIVGERYVPGISQVTREDVTMREVVHLLCIEPMAHSSLVKGLPENES
HETGLETVISKVATFKKPGVSGHGLYEVKKELQVEFNPFYYHYSRSQHSKAEESQKKRRT
HEGNDKALRPPLPPAFCPAFSNIVRLLCCDIIVHILRRVLQRAAEERATHWTEAMIQRAL
HVIGQALLEEKSQLEDSTVEEVTFDFSLKARRIGSEHGKSMFLLLAKIKALPSLEAQKDM
VKWVLQMFEIVKCLREKSSPTASMSVETTKPEEVTKINSVQDKEKAERKRKAEAAKLHRQ
KIMAQMSAMQKNFIESNKMLYDNMPDSGMQGEPVTIADSLGSGNSSSCPMEQRELCVAIG
PQRGSTPAERELLTCILCQEEQEVVAQGSAMVLTACVQRSTVLTQCRGKILTNRADGSGT
SYPRFMLPDLAVGTHTGSCGHVMHATCWQKYFEAVQNTTRNRLHTELIIDLENGEYLCPL
CKSLCNTVVPLIPLESLTFNYENAEIIGQHLTMPRWIQIISARIKGLKSFTQDNDCSAEG
NSAEGETGLCGQGQPDFRSILSYGVQEPRKFSDSIAQMLVVCATTVHRVGLQTAPNELCP
RVPLMAWNTCAFTIQAIDNVLQEEEKSLFGSLQNRQLAGLKAIVQFSASQRLKSSQTVIQ
RHFTDMLGVLLPVLSRNNTPSLLEVDFFHLLVGLVLSIPSLYQEEAVDLQPSAVSSAYNH
LHILHLVTMAHITQILLSSTDFNLVAGGEETEEVRAAAELHSAVSQHTGRLVPDVSGSSV
AERVKRGIEPFLRCAALFFNCLTGVHPPEELLSTSVTSQGQMEALCNYLALPSNVFQLFQ
EHRDTVNPLLQRWCGSPAVTKALKDKTQTVRYPRRRNRLIDLPEDYSALLNQASHFQCPK
STDDERKHPTLCLFCGAMLCSQSTCCVSQLDGEDVGACTAHAATCGAGVGMFLRIRECEV
ILMASKTRGSTYPAPYLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSL
EVVNVMFAFEWQTL
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggagagaaatccccagacggactggacctcagcaaggaatggctgcaggct
gcggacagcagggcggagctgctcctctacctgaaggagcaggtgcctcagatcttctgc
ttgaagaaggagtcaagcccccaagagagagaggagatcatgcagagcctactcttccac
cccctagagtgtttcttgtttggagaggatcctcaggagggtctggagaagctcaagcag
ggaagcacctcctcccagctctgtggacgcgtcttcaaagagggcgagacagtctactcc
tgcagggattgtgcaatagatcccacttgtgttctgtgcatggattgcttccaggacagt
gtgcacaaaagccatcgttacaagatgcatgcgtcatcaggcggggggttctgtgactgc
ggggatgtggaggcctggaagatcggcccctgttgctccaaacacgacccaggggcagcc
actgccatggttacggatgagtgtgttttggagcctgagttatatgagcgcgctgagaag
ctgttccgggttcttctgcactacctcacggatttcttggtgtgggaggagaactttgag
ctatcagccgaactccagccccgacaaaaagacaatgcgtactactgtgtactgtacaat
gatgagcaccactcgtacgaccatgtcatctacaccctgcagcgttctgttaactgtgat
cagactgaagcacagacgcacacacaactcattgataaggagggtcggcgtgcagtgaaa
agaggaacccttcgttcctgtcaacaagcaaaagaccttatcaggtccaactcggaacac
atttccctgcagccactgcgtgtggagatcctccacgccgccataatggctcatcagacg
tttgctctgcgtctcggctcctggttccaaaagatcatcagttactcagctgggttcagg
caggccttctgtcaggtggcactagagccaggcacagatggagaccgtccttgtctcatc
agcagactcatgctgcacgacgccaggatgtacaaaggagctcgcaagatagtacacgag
ctgatcttctgtagcatgctattggagacagagttcaagaggcaatttgcgtttgagttt
acaaagcactttaagcagctgcagaaggactttatccatgatgaccatgataggagtata
tccatcaccgctctgtctgttcagatcttcactgtacccacgctggccagacagctgatt
gaagagggcaacgtcataaaggtggtagttgatacagttatggaattgctgcgtgaacat
ctggatgacaacaatcgtttcttcttcctgggctacaactcagacaagttctcacgcatc
caggtcatcttccacgacctcagatatatcctgatcagtaaaccctcaacatggactgac
gagctgcggagacagttcctcgaggggttcaaagtttttcttgggtttctcaaatgcatg
cagggtatggaggaggtgaagcgccagtttggacaacacattgcagtagagccagagtgg
gaagctggattttctcttcagatccagctccgtcacattcttgccatgtttcaagactgg
tgttcctctgatcccgagatcttgctgcttgcatttaaagagtgccacaaagacctgatg
cagtgcaatcaccagcctttccgcagggaggccattgacttctacatgtgcaagcacatc
ctccatgtccgcccgtacaaagtgtctcaagagccggtcagcatacatctgcccatctcc
aggctgctggctggcttgtatgtacttctgtgcaaaacaggagcaattggacatctggac
aatcctgagatttatgactatacccagctggtggaacatcctctgcgctgtgtggtgctg
gctgctcaggtctcagcagagatgtggcggagaaacggactctcactggtcagccaggtc
tactactaccaggatgtaaaatgcagggatgagatgtacgacaaggacattctcatgctt
cagatagctgcttccaagatggaccccaaccacttcctcatgctgatcttgttgagattc
gagctctttgattattttaatggaagctgttcaagcaaagaccaggacgaattgatacag
tggaatcgattgacggaggagatgttgtacctgctgatcgtcatcgttggtgagcgctat
gtccctgggatcagtcaggtgaccagagaggatgtgacgatgagggaggttgtccacctg
ttgtgcattgagcccatggctcatagtagcctggtcaaagggctgccagagaatgaaagc
catgaaacaggcctggagacggtaatctccaaagtggccaccttcaaaaaaccaggcgta
tcaggacacggattatatgaagtaaaaaaagagcttcaggtagaattcaaccctttctac
taccattattcaagatcccagcatagcaaggcagaagaatctcaaaagaaaaggagaact
catgaggggaatgataaagctcttcgtcccccgctgcccccagccttctgcccggccttc
tccaacatagtgcgtctgctctgctgtgacattatcgtccacatcctaaggcgcgtcctg
cagagagccgcagaggaacgggcgactcactggacagaagccatgatccagagggccctg
catgtgattggtcaggcattgctggaagagaaatcacagcttgaggacagcactgtggag
gaagtgacctttgatttcagcctaaaggctcgcagaattggttcagaacatggcaagtcc
atgttcctcttgttggccaagattaaggctcttccttcccttgaagctcagaaagacatg
gtcaaatgggttctacagatgtttgagattgtcaagtgccttagagagaagtccagtcca
acagcttccatgagtgtggagacgaccaagccagaggaggtaacaaaaatcaatagcgtt
caggacaaggagaaagctgagcggaaaaggaaggcggaggcagccaaactccaccgtcag
aagatcatggcccaaatgtcagcaatgcagaagaacttcattgagtccaacaagatgctg
tacgacaacatgcctgacagtgggatgcagggagagcctgtcacaatcgctgatagtttg
ggttccggtaattcctctagctgtcccatggagcagagggagctgtgcgtagccatcggg
ccccaacgagggtcgaccccagcggagagggagctactgacctgcattctttgtcaggag
gagcaggaagtggtggctcaggggtcggccatggtcctgactgcgtgtgtccagaggtcc
acggtgctgacacagtgcagaggaaagatactgaccaacagagcagacgggtcggggaca
tcgtatcctcggttcatgcttcctgatctggcggtggggacccacactggcagctgtggg
catgtcatgcatgccacatgttggcagaaatattttgaggcagttcagaatacaaccagg
aaccgtctccacactgagctgatcattgacctggagaacggcgagtacctgtgtcccctg
tgcaagtctctgtgcaataccgttgttcccctcatcccgttggaatcactaacatttaac
tatgagaacgcagaaataattggacagcatttgaccatgcctcgctggatccagatcatc
tctgccaggatcaaaggactgaagtcattcactcaggataatgattgcagcgcagaggga
aatagtgctgaaggggaaacggggctgtgtggacagggccagccggacttcagatccatt
ctcagctatggagtacaagaaccgagaaagttctcggacagcatagcgcagatgctcgtt
gtgtgcgccaccacggtccaccgggtgggattgcagacggcgcccaatgagctgtgtcct
cgtgtgccccttatggcctggaatacatgtgccttcactattcaggccattgataacgtt
ttgcaggaagaggagaaatcgctctttgggtccttacaaaacagacagcttgccggtctg
aaagcaatagttcagttttcagcatcccagagacttaagagctctcagactgtaatccaa
aggcacttcacagacatgctgggggtattgctgccggttctgagtagaaataacacccca
tcccttctcgaggtggacttcttccatctgctggtggggttggtgttgtctataccctca
ctgtaccaggaggaggcagtagacttacagccgtctgccgtcagctctgcctacaaccac
ctgcacatcctgcatctggtcaccatggcgcacattacacagatcctcctgtcctctaca
gatttcaaccttgtggcgggtggagaggagacggaggaggtgagggcagcagcagagctg
cacagtgcagtgtcacaacacactgggaggctggttccagatgtgtctggtagctctgtc
gcagaaagagtgaagagaggaattgaacctttcctgcgctgtgctgctctgttcttcaat
tgccttacgggagtacatcctccagaggaactcttaagtacttctgttacctcccaagga
cagatggaggcactatgcaattatctggcactaccctccaatgtgttccagctcttccag
gagcacagagacaccgttaatccactgctgcagaggtggtgtgggagcccagctgtaacc
aaagccctgaaagacaaaacccagactgtcagataccccaggagaaggaatcgtttgatc
gatcttcctgaggattacagtgctcttctcaatcaggccagccattttcagtgtcccaag
tctacagatgacgagaggaagcacccaaccctgtgcctgttttgtggggccatgctgtgc
tctcagagcacttgctgcgtcagccagctagatggggaagatgtgggagcgtgcaccgcc
cacgctgctacctgtggtgctggtgtgggaatgttcctgaggataagagagtgtgaagtt
attctgatggccagtaagactcgaggaagcacataccctgctccttacctggatgattac
ggggagactgatcctcaccttggaaggggcaatccattgcacctctgcccagagcgctac
aggaagctgaaccagctgtggcagcaacactgcatcctggaagaaatagcccgcagcctg
gaggtggtcaacgtgatgtttgccttcgagtggcagacgttgtga
DBGET
integrated database retrieval system
