KEGG   Scophthalmus maximus (turbot): 118286632
Entry
118286632         CDS       T09850                                 
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
  KO
K10625  E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27]
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118286632 (ubr1)
Enzymes [BR:smau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118286632 (ubr1)
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   UBR box proteins
    118286632 (ubr1)
SSDB
Motif
Pfam: PRT6_C UBR1-like_wing zf-UBR ClpS
Other DBs
NCBI-GeneID: 118286632
NCBI-ProteinID: XP_035467098
LinkDB
Position
15:11696231..11713412
AA seq 1754 aa
MAEGEKSPDGLDLSKEWLQAADSRAELLLYLKEQVPQIFCLKKESSPQEREEIMQSLLFH
PLECFLFGEDPQEGLEKLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGAATAMVTDECVLEPELYERAEK
LFRVLLHYLTDFLVWEENFELSAELQPRQKDNAYYCVLYNDEHHSYDHVIYTLQRSVNCD
QTEAQTHTQLIDKEGRRAVKRGTLRSCQQAKDLIRSNSEHISLQPLRVEILHAAIMAHQT
FALRLGSWFQKIISYSAGFRQAFCQVALEPGTDGDRPCLISRLMLHDARMYKGARKIVHE
LIFCSMLLETEFKRQFAFEFTKHFKQLQKDFIHDDHDRSISITALSVQIFTVPTLARQLI
EEGNVIKVVVDTVMELLREHLDDNNRFFFLGYNSDKFSRIQVIFHDLRYILISKPSTWTD
ELRRQFLEGFKVFLGFLKCMQGMEEVKRQFGQHIAVEPEWEAGFSLQIQLRHILAMFQDW
CSSDPEILLLAFKECHKDLMQCNHQPFRREAIDFYMCKHILHVRPYKVSQEPVSIHLPIS
RLLAGLYVLLCKTGAIGHLDNPEIYDYTQLVEHPLRCVVLAAQVSAEMWRRNGLSLVSQV
YYYQDVKCRDEMYDKDILMLQIAASKMDPNHFLMLILLRFELFDYFNGSCSSKDQDELIQ
WNRLTEEMLYLLIVIVGERYVPGISQVTREDVTMREVVHLLCIEPMAHSSLVKGLPENES
HETGLETVISKVATFKKPGVSGHGLYEVKKELQVEFNPFYYHYSRSQHSKAEESQKKRRT
HEGNDKALRPPLPPAFCPAFSNIVRLLCCDIIVHILRRVLQRAAEERATHWTEAMIQRAL
HVIGQALLEEKSQLEDSTVEEVTFDFSLKARRIGSEHGKSMFLLLAKIKALPSLEAQKDM
VKWVLQMFEIVKCLREKSSPTASMSVETTKPEEVTKINSVQDKEKAERKRKAEAAKLHRQ
KIMAQMSAMQKNFIESNKMLYDNMPDSGMQGEPVTIADSLGSGNSSSCPMEQRELCVAIG
PQRGSTPAERELLTCILCQEEQEVVAQGSAMVLTACVQRSTVLTQCRGKILTNRADGSGT
SYPRFMLPDLAVGTHTGSCGHVMHATCWQKYFEAVQNTTRNRLHTELIIDLENGEYLCPL
CKSLCNTVVPLIPLESLTFNYENAEIIGQHLTMPRWIQIISARIKGLKSFTQDNDCSAEG
NSAEGETGLCGQGQPDFRSILSYGVQEPRKFSDSIAQMLVVCATTVHRVGLQTAPNELCP
RVPLMAWNTCAFTIQAIDNVLQEEEKSLFGSLQNRQLAGLKAIVQFSASQRLKSSQTVIQ
RHFTDMLGVLLPVLSRNNTPSLLEVDFFHLLVGLVLSIPSLYQEEAVDLQPSAVSSAYNH
LHILHLVTMAHITQILLSSTDFNLVAGGEETEEVRAAAELHSAVSQHTGRLVPDVSGSSV
AERVKRGIEPFLRCAALFFNCLTGVHPPEELLSTSVTSQGQMEALCNYLALPSNVFQLFQ
EHRDTVNPLLQRWCGSPAVTKALKDKTQTVRYPRRRNRLIDLPEDYSALLNQASHFQCPK
STDDERKHPTLCLFCGAMLCSQSTCCVSQLDGEDVGACTAHAATCGAGVGMFLRIRECEV
ILMASKTRGSTYPAPYLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSL
EVVNVMFAFEWQTL
NT seq 5265 nt   +upstreamnt  +downstreamnt
atggcggagggagagaaatccccagacggactggacctcagcaaggaatggctgcaggct
gcggacagcagggcggagctgctcctctacctgaaggagcaggtgcctcagatcttctgc
ttgaagaaggagtcaagcccccaagagagagaggagatcatgcagagcctactcttccac
cccctagagtgtttcttgtttggagaggatcctcaggagggtctggagaagctcaagcag
ggaagcacctcctcccagctctgtggacgcgtcttcaaagagggcgagacagtctactcc
tgcagggattgtgcaatagatcccacttgtgttctgtgcatggattgcttccaggacagt
gtgcacaaaagccatcgttacaagatgcatgcgtcatcaggcggggggttctgtgactgc
ggggatgtggaggcctggaagatcggcccctgttgctccaaacacgacccaggggcagcc
actgccatggttacggatgagtgtgttttggagcctgagttatatgagcgcgctgagaag
ctgttccgggttcttctgcactacctcacggatttcttggtgtgggaggagaactttgag
ctatcagccgaactccagccccgacaaaaagacaatgcgtactactgtgtactgtacaat
gatgagcaccactcgtacgaccatgtcatctacaccctgcagcgttctgttaactgtgat
cagactgaagcacagacgcacacacaactcattgataaggagggtcggcgtgcagtgaaa
agaggaacccttcgttcctgtcaacaagcaaaagaccttatcaggtccaactcggaacac
atttccctgcagccactgcgtgtggagatcctccacgccgccataatggctcatcagacg
tttgctctgcgtctcggctcctggttccaaaagatcatcagttactcagctgggttcagg
caggccttctgtcaggtggcactagagccaggcacagatggagaccgtccttgtctcatc
agcagactcatgctgcacgacgccaggatgtacaaaggagctcgcaagatagtacacgag
ctgatcttctgtagcatgctattggagacagagttcaagaggcaatttgcgtttgagttt
acaaagcactttaagcagctgcagaaggactttatccatgatgaccatgataggagtata
tccatcaccgctctgtctgttcagatcttcactgtacccacgctggccagacagctgatt
gaagagggcaacgtcataaaggtggtagttgatacagttatggaattgctgcgtgaacat
ctggatgacaacaatcgtttcttcttcctgggctacaactcagacaagttctcacgcatc
caggtcatcttccacgacctcagatatatcctgatcagtaaaccctcaacatggactgac
gagctgcggagacagttcctcgaggggttcaaagtttttcttgggtttctcaaatgcatg
cagggtatggaggaggtgaagcgccagtttggacaacacattgcagtagagccagagtgg
gaagctggattttctcttcagatccagctccgtcacattcttgccatgtttcaagactgg
tgttcctctgatcccgagatcttgctgcttgcatttaaagagtgccacaaagacctgatg
cagtgcaatcaccagcctttccgcagggaggccattgacttctacatgtgcaagcacatc
ctccatgtccgcccgtacaaagtgtctcaagagccggtcagcatacatctgcccatctcc
aggctgctggctggcttgtatgtacttctgtgcaaaacaggagcaattggacatctggac
aatcctgagatttatgactatacccagctggtggaacatcctctgcgctgtgtggtgctg
gctgctcaggtctcagcagagatgtggcggagaaacggactctcactggtcagccaggtc
tactactaccaggatgtaaaatgcagggatgagatgtacgacaaggacattctcatgctt
cagatagctgcttccaagatggaccccaaccacttcctcatgctgatcttgttgagattc
gagctctttgattattttaatggaagctgttcaagcaaagaccaggacgaattgatacag
tggaatcgattgacggaggagatgttgtacctgctgatcgtcatcgttggtgagcgctat
gtccctgggatcagtcaggtgaccagagaggatgtgacgatgagggaggttgtccacctg
ttgtgcattgagcccatggctcatagtagcctggtcaaagggctgccagagaatgaaagc
catgaaacaggcctggagacggtaatctccaaagtggccaccttcaaaaaaccaggcgta
tcaggacacggattatatgaagtaaaaaaagagcttcaggtagaattcaaccctttctac
taccattattcaagatcccagcatagcaaggcagaagaatctcaaaagaaaaggagaact
catgaggggaatgataaagctcttcgtcccccgctgcccccagccttctgcccggccttc
tccaacatagtgcgtctgctctgctgtgacattatcgtccacatcctaaggcgcgtcctg
cagagagccgcagaggaacgggcgactcactggacagaagccatgatccagagggccctg
catgtgattggtcaggcattgctggaagagaaatcacagcttgaggacagcactgtggag
gaagtgacctttgatttcagcctaaaggctcgcagaattggttcagaacatggcaagtcc
atgttcctcttgttggccaagattaaggctcttccttcccttgaagctcagaaagacatg
gtcaaatgggttctacagatgtttgagattgtcaagtgccttagagagaagtccagtcca
acagcttccatgagtgtggagacgaccaagccagaggaggtaacaaaaatcaatagcgtt
caggacaaggagaaagctgagcggaaaaggaaggcggaggcagccaaactccaccgtcag
aagatcatggcccaaatgtcagcaatgcagaagaacttcattgagtccaacaagatgctg
tacgacaacatgcctgacagtgggatgcagggagagcctgtcacaatcgctgatagtttg
ggttccggtaattcctctagctgtcccatggagcagagggagctgtgcgtagccatcggg
ccccaacgagggtcgaccccagcggagagggagctactgacctgcattctttgtcaggag
gagcaggaagtggtggctcaggggtcggccatggtcctgactgcgtgtgtccagaggtcc
acggtgctgacacagtgcagaggaaagatactgaccaacagagcagacgggtcggggaca
tcgtatcctcggttcatgcttcctgatctggcggtggggacccacactggcagctgtggg
catgtcatgcatgccacatgttggcagaaatattttgaggcagttcagaatacaaccagg
aaccgtctccacactgagctgatcattgacctggagaacggcgagtacctgtgtcccctg
tgcaagtctctgtgcaataccgttgttcccctcatcccgttggaatcactaacatttaac
tatgagaacgcagaaataattggacagcatttgaccatgcctcgctggatccagatcatc
tctgccaggatcaaaggactgaagtcattcactcaggataatgattgcagcgcagaggga
aatagtgctgaaggggaaacggggctgtgtggacagggccagccggacttcagatccatt
ctcagctatggagtacaagaaccgagaaagttctcggacagcatagcgcagatgctcgtt
gtgtgcgccaccacggtccaccgggtgggattgcagacggcgcccaatgagctgtgtcct
cgtgtgccccttatggcctggaatacatgtgccttcactattcaggccattgataacgtt
ttgcaggaagaggagaaatcgctctttgggtccttacaaaacagacagcttgccggtctg
aaagcaatagttcagttttcagcatcccagagacttaagagctctcagactgtaatccaa
aggcacttcacagacatgctgggggtattgctgccggttctgagtagaaataacacccca
tcccttctcgaggtggacttcttccatctgctggtggggttggtgttgtctataccctca
ctgtaccaggaggaggcagtagacttacagccgtctgccgtcagctctgcctacaaccac
ctgcacatcctgcatctggtcaccatggcgcacattacacagatcctcctgtcctctaca
gatttcaaccttgtggcgggtggagaggagacggaggaggtgagggcagcagcagagctg
cacagtgcagtgtcacaacacactgggaggctggttccagatgtgtctggtagctctgtc
gcagaaagagtgaagagaggaattgaacctttcctgcgctgtgctgctctgttcttcaat
tgccttacgggagtacatcctccagaggaactcttaagtacttctgttacctcccaagga
cagatggaggcactatgcaattatctggcactaccctccaatgtgttccagctcttccag
gagcacagagacaccgttaatccactgctgcagaggtggtgtgggagcccagctgtaacc
aaagccctgaaagacaaaacccagactgtcagataccccaggagaaggaatcgtttgatc
gatcttcctgaggattacagtgctcttctcaatcaggccagccattttcagtgtcccaag
tctacagatgacgagaggaagcacccaaccctgtgcctgttttgtggggccatgctgtgc
tctcagagcacttgctgcgtcagccagctagatggggaagatgtgggagcgtgcaccgcc
cacgctgctacctgtggtgctggtgtgggaatgttcctgaggataagagagtgtgaagtt
attctgatggccagtaagactcgaggaagcacataccctgctccttacctggatgattac
ggggagactgatcctcaccttggaaggggcaatccattgcacctctgcccagagcgctac
aggaagctgaaccagctgtggcagcaacactgcatcctggaagaaatagcccgcagcctg
gaggtggtcaacgtgatgtttgccttcgagtggcagacgttgtga

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