Scophthalmus maximus (turbot): 118286801
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Entry
118286801 CDS
T09850
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04517
IgSF CAM signaling
smau04520
Adherens junction
smau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118286801
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118286801
04530 Tight junction
118286801
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GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RASSF8-10_RA
RA_3
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
118286801
NCBI-ProteinID:
XP_035467399
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All DBs
Position
15:4671971..4684844
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AA seq
1203 aa
AA seq
DB search
MPEEERRERLAKVIRQWNNNRLDLFKISEPDENLDFHGVMRFYFEDHVGGSVATKCLRVC
SNSSTLDVIDVLSEKFRPDMKMLTTSYSLYEVDAKKERKLEQEERPLIVQLNWNSDQKEE
RFVLKRDKESFQENGQEKEREGMIQKFKRTLSRKEKKSIIKAHRISDDEDWSTEKPRSLC
VSNRDTEDCTEDKKHQWQSAPGVRLSGSLHQDFPDQPGLPFGIEFSDNSEDAFLSAVINY
ANSSTVHFKLSPAYILYAAGHFALRCQRYRRGSTPSGQKHSVKSITNKMVAMTEKVIQRQ
ESIAGALAFWMANASELLNFFKHDRDLRLLTQQSQLDLPHLVHKAYRFLLQCLQNELAKH
LPTFLIDPEQHGPLPAGIELVLNTLMNTMSMLSRHRVNPALTIQLFSRLFHFISIWLFNQ
LMSPEADAPGLRSHYWGAALRQRLTAIEAWAERHGLELAADVHLGHIIQATTLLTMNKYS
MQDLKDIQNTCFKLNSVQLKMLLTGYFYANTEPHIPLDLIDAVVTAVEASADNRIRSEGR
DIQLEESLDLCLPFLVPEGGYSCDIVRGIPPGLREFLEPICQKGLCSLTSESNSKGDWTI
YFHEDTLPAERTYLAAHTEPEIVTITLRKPLNSGMGLSIVAAKGAEQGNLGIYIKSVVKG
GPAEMNGMLKSGDQLLSVDGQSLVGLSQERAAAIIGQTGPVVTLKVEKFGASYHGLGALL
GEPAPERITGEKSFPKPNGEAFELYSAVEAGPSQQLHERSSSRWNKEQIMQRNRQLYRSD
PNMTTDRCLRDEPADPVVRGNKIAADSSINICTDTFHRDYSTLPNPKSQGKNISESSRPQ
QTFESLRPLDGKSSSKKIYVRQALSQENLCGDSGGPLLDKRRSTCEQQGGSAKQRPSHYS
SFPIRSCVSSHDILSDNSSPARGAGVWRLPFSQHSTSTTSVQPKRIDVPLTRAANTQPNP
PLVTFQRPSLLSMNQANNIYACPIPATEKLPQLSLSSQQHRSSMFRGQAVKLQVNGTPKK
HVSFQEPPTQQEQGTAQPSEPRRRETQEKLEEKQQRLPALELLKHTVQELQAKVTRSAEE
NERLHKLRLEWQFQRRLQEIQQRNDDEDEHEDFDRMVTIQQQDTSAQSSGGNINGKLKEL
EKLTGNPVSQKEDRINIAQRRTGLTENVHNVATKQNREEKIQSMAAPEKLTFRERQRLFL
SSA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggaggaaagacgggagaggttagccaaagtcatcagacagtggaacaacaac
agactggacctgtttaaaataagcgaaccagatgagaacctggattttcacggcgtgatg
cgcttctactttgaggatcacgtcgggggaagcgtggccacgaagtgtctgcgtgtttgc
agcaactcgtcaactctcgacgtcatcgacgttctctcggagaaattcaggcctgatatg
aaaatgctgacgaccagctactccctgtacgaagtcgacgccaagaaggaacgcaaactg
gagcaggaagagaggcctttgatcgtacaactcaactggaactcggaccaaaaggaagaa
cgcttcgtactgaagagagacaaggagagtttccaggaaaacggccaggagaaggagaga
gaaggcatgatccaaaagttcaagaggacactgtcgagaaaagaaaagaagagcataatt
aaagcccacaggatttcagacgatgaggattggtcaactgagaagccacggagcctgtgt
gtgtctaaccgtgacacagaagattgcactgaagacaaaaagcatcagtggcagagcgcc
ccgggagtgaggctctcaggaagtcttcatcaggactttccagatcaacctggattacca
tttgggatcgaattcagtgacaactccgaggacgccttcctgtctgcggtcatcaattac
gccaacagctccacggttcatttcaagctctcgcccgcgtacatcctctatgctgcggga
cactttgctctgcggtgccaacgttacaggcgaggctcgacgccctctggacaaaagcac
agtgtaaaatccatcactaataaaatggtggccatgacagagaaggtcatacagaggcag
gagagcatcgcgggggctctcgccttctggatggccaacgcctccgagctgctgaatttc
ttcaagcacgacagagacctccgcctgctcacacagcaaagtcagctggatctcccccac
ctggtgcacaaagcttacaggttcctgctgcagtgtctacagaatgagttagcaaagcat
ttgccaacttttttgattgatcctgagcaacacggtcccctgccggctggcatagagttg
gtgctgaacaccttaatgaacaccatgtctatgttaagccgccatcgggtcaaccccgcc
ctcaccatccagctcttctcccggctcttccatttcattagtatctggctcttcaaccag
ctcatgagccccgaggccgacgccccgggcctgcgctcccactactggggagcggctctc
cgtcagaggcttaccgccatcgaggcctgggcggagaggcacggcctggagctggccgcc
gacgtgcaccttggacacatcatccaggcaaccacactcctgaccatgaataagtactcg
atgcaagacctgaaggacatccagaatacctgcttcaagctgaactcggtgcagctgaag
atgttgctcactggctacttctatgcaaacactgagccccacatcccccttgatttgatc
gatgctgttgtgacggccgtcgaggcctcagcagacaaccggattcggagcgaaggacgg
gacatccagctggaggagagcctcgacctctgcctgcccttcctggtgccagagggcgga
tactcctgtgacatcgtgagaggaatccctcctgggcttcgggagtttttggagccaatt
tgccaaaagggtctctgctctttaacatccgagtcaaattccaaaggtgactggaccata
tatttccatgaagatacactccctgcagaaagaacatacttggcagcacacacagagcca
gagattgtgaccatcacacttaggaaacctctcaacagtgggatggggctcagcatcgtt
gccgccaagggagcagagcaaggtaaccttgggatttatatcaaatccgttgtcaaggga
ggaccagctgaaatgaatggcatgttaaaatctggggaccagctgctcagtgtggatggt
caaagcctggttggcctcagccaagaaagggcagcggctatcattgggcaaaccggccca
gttgtgaccttgaaggttgaaaagtttggagctagctaccacggcctgggggctctgctg
ggtgaaccagctccagaaaggattacaggtgaaaagagctttccaaagccaaacggtgaa
gccttcgagctgtacagtgctgtggaagcgggtccgtcccaacagctccatgaaagaagc
agcagcaggtggaacaaagagcagataatgcagaggaacaggcagctttaccgctccgac
cccaacatgaccacagaccgttgcctgcgagatgaacctgctgaccctgttgtgagaggg
aacaagatcgccgctgattccagtatcaacatctgcaccgatacatttcacagggactac
tctacacttccaaaccctaaatcacagggcaagaacatttctgaatccagtcgaccgcag
caaacatttgagtctttgaggcctttggatggaaagagctccagtaagaagatctacgtg
cgtcaagcactctcacaggaaaacttgtgtggggacagtggaggccccctgctggacaaa
aggcggagcacatgtgagcagcagggcggcagtgcaaaacaaagaccgagccactattca
tctttcccaattcgctcctgcgtctctagtcatgacatcctctccgataacagttctccc
gcacgtggcgctggtgtctggagactccctttttcacaacattcaacatctacgacctca
gttcagcccaaacgtattgacgtccccttgaccagagcagccaacacacagcccaatcct
ccactcgtcaccttccagagaccgtctctgttgtcaatgaaccaggcgaacaatatttac
gcatgccccattcctgcaaccgagaaactccctcagctctcactctcgtcgcagcagcac
agatccagcatgttcaggggtcaagcagtgaaactccaagtaaacggcactcctaagaaa
cacgtttccttccaagagcctcccactcaacaggagcaaggcacagctcagccgtctgag
ccgcggaggagggaaacgcaggagaagctggaggagaagcagcagaggctcccggcgctg
gagctcctgaagcacacggtgcaggagcttcaggccaaagtgacgcgctcggccgaggag
aacgagcgactccacaaactcagactggagtggcagtttcagaggaggctgcaggagatt
cagcagagaaatgacgacgaggacgagcatgaggactttgacaggatggtgacgatacag
cagcaggacacaagtgcacagagctctggaggaaatatcaacggcaaattgaaagagctg
gaaaagctgacaggaaaccccgtctcccaaaaggaagacaggatcaacatagcacaaaga
cggactggactgactgaaaatgttcataatgtggcaacaaagcaaaaccgggaggagaaa
atccagagcatggcagctcctgaaaagcttacgttcagggagcgtcagcgtctctttttg
tccagtgcataa
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