Scophthalmus maximus (turbot): 118286824
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Entry
118286824 CDS
T09850
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118286824 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smau03009
]
118286824 (dkc1)
03032 DNA replication proteins [BR:
smau03032
]
118286824 (dkc1)
Ribosome biogenesis [BR:
smau03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
118286824 (dkc1)
Prokaryotic type
118286824 (dkc1)
DNA replication proteins [BR:
smau03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
118286824 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
Pus10_C
Motif
Other DBs
NCBI-GeneID:
118286824
NCBI-ProteinID:
XP_035467454
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All DBs
Position
15:complement(151329..156198)
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AA seq
543 aa
AA seq
DB search
MARVHRTEPDRTGDVRGPVAEPRATRAGAKPERLKRLSSVKKKKMTKKISEDEVAEIQQS
GNFLIQPESKVASLDTSQWPLLLKNFDKLNVRTTHYTPLPNGSNPLKRSIQDYVRSGFIN
LDKPANPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEY
VGIVRLHNAIENEHTLARTLETLTGALFQRPPLIAAVKRQLRVRTIYESKLIEYDPERRL
GIFWVSCEAGTYIRTLCVHMGLLLGVGGQMQELRRVRSGVLGEKDHMVTMHDVLDAQWQF
DHNKDEAYLRRVVFPLEKLLVSHKRLVMKDSSVNAICYGAKIMLPGVLRYEDGIEVNQDI
VVITTKGEAICTAVALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKMMI
QKGLLDKHGKPNGSTPSDWRSGYVDYNVSKVEDGSGDASAKRKRDATDSDGEAAATPSTP
VTPSTDTKKEKKKKKEKRAKLEEAEPAEEEAALDGSGAELMSVVSESKKKKKKKKQKDGD
MSE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgttcaccggacagaaccggacagaaccggagatgttcgcggccccgtcgct
gagccacgtgcgactcgggccggagctaaaccagaacgactgaagagactgtcatctgtg
aagaagaagaagatgacaaagaaaataagcgaagatgaagtcgcggagattcagcagagc
ggcaacttcctcatccaaccagagagcaaggtggcgtcgctggacacgtcgcagtggccg
ctgctgttaaagaactttgacaaactgaacgtccggacgactcattacacgccgctgccc
aacggcagcaaccccctcaagaggagcatccaggactatgtcaggtcgggcttcatcaac
ctggacaaaccggcaaacccgtcgtctcacgaggtcgtggcctggattcgccggatcctg
cgcgtggagaagacaggtcacagtgggacgctggacccgaaggtcaccggatgcctgata
gtgtgtgtggaccgagccacgcgactcgtcaagtcccagcaaagcgcaggtaaagagtat
gtgggaatcgttcggctgcacaatgcgatagagaacgaacacactctggctcggacgttg
gagaccctgaccggcgccctgttccagcggccgccgctcatcgccgccgtgaagcgtcag
ctgagagtccggacgatctatgagagcaaactgatcgagtatgaccccgagcggaggcta
ggaatcttctgggtgagctgcgaagcaggaacgtacatccggacgctgtgcgtccacatg
ggcctgctgctcggggtcggaggtcagatgcaggagctgaggagagtccggtcgggagtc
ctgggagagaaggaccacatggtgacgatgcacgacgttctggacgctcagtggcagttc
gaccacaacaaagacgaggcgtacctgcggagagtcgtgttcccgctggagaagctgctt
gtgtcccacaagcgtctggtgatgaaggacagttcggtgaatgccatctgctacggcgcc
aagatcatgctgcccggcgtcttgcgctacgaggatggaatcgaggtgaaccaggacatc
gtcgtcataacaaccaagggggaggctatctgcacagccgtggctctgatgacgacggcg
gtgatctccacatgtgaccatggcgtggtggcgaagatcaagagggtgatcatggagaga
gacacgtacccccgtaagtggggactgggcccgaaggcgagtcagaagaagatgatgatt
cagaaaggactcctcgacaaacacgggaaaccgaatggcagcacgccgtcggactggagg
agcggatatgttgactacaatgtttccaaagtagaggacgggtcaggtgacgcctcagcg
aagagaaagagggacgcgacagacagcgatggagaagctgcggcgacgccctcaacgccg
gtgacaccgtcgacggatacgaagaaagagaagaagaagaaaaaggaaaagagggcgaag
ctggaggaggcggagcctgccgaggaagaggcggcactcgatggaagcggggcggagctt
atgagcgtggtcagtgaaagcaagaagaagaagaagaagaagaaacagaaagacggcgac
atgtcagagtga
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