Scophthalmus maximus (turbot): 118286959
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Entry
118286959 CDS
T09850
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04520
Adherens junction
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
smau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118286959
04520 Adherens junction
118286959
09142 Cell motility
04820 Cytoskeleton in muscle cells
118286959
04810 Regulation of actin cytoskeleton
118286959
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118286959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118286959
04147 Exosome [BR:
smau04147
]
118286959
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118286959
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118286959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
118286959
NCBI-ProteinID:
XP_035467502
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Position
16:14261572..14285713
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AA seq
1064 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTFEKMSAE
INEIIRVLQLTSWDEDAWANKDTEAMKRALGLIDSKMGQAKNWLRDPNAQPGDQGEQAIR
QILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVSEMRARGQGAAPAAMQKAQQVSQGL
DVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGEENIKALLIEAKKIAD
MCEDPKERDDILRSIGELAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTIDDSGVGQAAIRGLVAEGRRLANALPGPYRQE
LLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLDAPNRDEVFDERAVNFENHANKLGTTAEKAAAVGTANKSTVEG
IQAAVKSTRDITPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTVLVDEAIDTK
SLLDASEEAIKKDLDKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EMVKAASDELSQTISPMVMNAKAVAGNIQDPSLQKGFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPELEQLSLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEAGDMANEPMMVAA
RQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGGGNKRALIQCAKDIAKASDEVT
RLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATEM
LVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacacgaagacgatagaaagtatcctggagccggtggcccagcagatc
tcccacctggtgataatgcacgaggaaggcgaagtcgacgggaaagctatcccggacctg
acggcgccggtcgcggccgtgcaggcggcggttagcaacctcgttcgggtggggaaggag
actgtacaaaccacagaggaccagatcatgaaaagggacatgccaccagcttttatcaaa
gtggaaaatgcgtgcacgaagctggtgcaggctgcctccatgctgaaagccgatccgtac
tccgttcctgctcgggattacctcatcgatggctcccggggcatcctctctgggacctct
gacctgctcctgacttttgacgaggccgaggtccgcaaaataatccgcgtatgcaaaggc
atccttgagtacctgacagtggcagaggtggtggagtctatggaggatctgatcacgtac
acaaagaacctgggaccaggcatgacaaagatggcaaagatgatagatgagcgacagcag
gagctgactcaccaggagcatcgtgtgatgctggtcaactccatgaacacagtcaaagag
ctgctgccaatcctcatctcaggtatcaaaatatttgtaacaaccaagacatctggcagc
cagggtgtggaggaggccttgaagaaccgtaacttcacttttgagaagatgagtgccgag
ataaacgagatcatcagagtgctgcagcttacatcttgggatgaggacgcctgggccaac
aaggacacagaggccatgaagagggctctggggctcatcgactcaaagatgggtcaggct
aagaactggctgagggatccaaacgctcaacccggtgaccaaggcgagcaggccattcga
cagatcctggatgaggccgggaaagttggtgaattgtgcgctgggaaggagcgccgagac
attttgggcacggccaagaccttgggccagatgaccgaccaggtgtctgagatgagggcc
agaggtcagggggcagccccagccgccatgcagaaggcccagcaggtttcccaagggctt
gacgtgctaactggcaaggtggaaaatgctgctcgcaaactggaagctatgactaactcc
aagcaggcgatcgccaaaaggattgatgccgcacaaaactggcttgcagaccccaatggt
ggcccagagggagaagagaacatcaaggccctgctcatcgaggccaaaaagattgcagac
atgtgcgaggatccaaaggaaagagatgatatcttgcgctctattggagagcttgctgca
atgactgccaagctctctgatctcagaagacagggtaaaggtgacactcccgaagccaga
gctttggctaaacagatcgcaacagctctgcagaacctgcagtccaagaccaacaaagct
gtggccaacagcaggcctgcaaaggcagctgttcatttggagggaaagatcgaacaggcg
cagcgctggatcgacaatcccacaatagacgacagcggtgttggccaggcagcaatccgc
ggcctggtggcagagggccgcaggctggccaacgctctgccggggccttacaggcaggag
ctgctgggtaaatgtgagcaggtggagcagctcatggcccagctggccgacctggccgcc
cgtggcgaaggggactcccctcaggcccgtgctgtggctcagcagctccaggaggccttg
aaagaccttaaagggaagatgcaagaggcgatgactcaggaggtgtctgacatcttcagt
gacaccaccacccccatcaagttactggcagtggctgccacagcgcccctggacgccccc
aacagagatgaggtgtttgatgaaagggctgtcaactttgagaaccacgccaataagctt
ggcaccactgcagagaaggccgctgcggtcggcacggccaacaagagcacggtggaggga
atccaggctgccgtcaagtcaacaagagacataacaccacaagtggtgtctgcggctcgt
atcctgctgagaaaccctggcaaccaagctgcgtatgaacattttgaaacaatgaagaat
cagtggattgacaatgtggaaaaaatgacagttttggtggacgaggccatcgacaccaaa
tctctactggatgcctcagaggaggccatcaagaaggacctggataagtgccgtgtggcc
atggccaaccaccaacctcagatgctggtcgccggcgccaccagcatcgcccgcagagcg
aaccgcattctcctggtcgcgaagcgagaggtggagaactctgaggatcccaaattcagg
gagatggtgaaagctgcttcggatgaacttagccagacaatttctccgatggtgatgaac
gccaaggctgtggctggaaatatccaggatccaagtcttcagaagggcttcctggactca
ggttataagattcttggggctgtagcaaaggtcagggaggccttccagccgcaagagcca
gacttcccaccacctcctcctgaactggaacagcttagtcttaacgatgaagcagcacca
cccaagcctcctcttccagagggtgaggtacctccccccaggcctcctcctcctgaggag
aaagatgaggagttccctgaagctggcgatatggctaatgagcccatgatggtggcggcc
aggcagctccacgatgaagcccgcaaatggtccagcaaaggaaatgacatcatcggcgct
gccaagcgaatggccttgctcatggcagagatgtcacgtctggtgcgcggaggcggcgga
aacaagcgtgccctcatccagtgcgccaaagacattgccaaggcttctgacgaggtcaca
cggctggctaaggaggtggccaagcagtgtaccgacaagagaatccggaccaacctgctc
caggtgtgtgaacgcattcccaccatcagcactcagctcaaaatcctgtccacagtcaag
gccaccatgctgggtcgtaccaacatcagcgaagaggaatcagagcaggccactgagatg
ttggtccacaatgctcagaacctgatgcagtctgtgaaggagaccgtcagggaggccgag
gcagcttccattaagatccggacagatgcaggtttcacccttcactgggtcaggaagacc
ccctggtaccagtga
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