Scophthalmus maximus (turbot): 118286976
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Entry
118286976 CDS
T09850
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118286976 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118286976 (smarcd2)
03036 Chromosome and associated proteins [BR:
smau03036
]
118286976 (smarcd2)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118286976 (smarcd2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118286976 (smarcd2)
PBAF complex
118286976 (smarcd2)
GBAF(ncBAF) complex
118286976 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
118286976
NCBI-ProteinID:
XP_035467539
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All DBs
Position
16:12344844..12353783
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AA seq
503 aa
AA seq
DB search
MALRGGFTGPPMNPSANPMNVGHSAGTRMSGMPQAPAGYPRSMGTAHQYLQRPGMPPNRI
GGPMGSMGSQLPGPSYGNMPMRPGMGPPSMDASRKRFLHHQHQQQQQQEALGGGLRRGAK
RRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRI
YISNTYTPCKPEGEEAEKVSSWELRVEGKLLEEPGKQKRKFSSFFKSLVIELDKELYGPD
NHLVEWHRMATTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTR
ASIMQALWLYIKNNKLQDGHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPII
INHVISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYIN
QLKTERDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDVTGNPEEERKTEFYQAPWVPEAVG
RYVYSKVQQRRQELEQVLGIRLT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagaggcggcttcacgggtcccccgatgaacccgagcgcgaaccccatgaac
gttgggcactcggcgggcactcggatgtcagggatgccccaggctccagcgggatacccc
cggagcatgggcaccgctcaccagtacctccagcgcccagggatgccaccaaatcggatc
gggggccccatggggtcgatggggagtcagctgcctggtccctcttatgggaacatgccc
atgcggccaggcatggggcctccaagcatggatgcttcaaggaagcggttccttcatcat
cagcatcaacagcagcagcagcaggaggcgctgggcggaggcctcaggcgaggggcaaaa
agacgcaagatggcagacaaggttctcccacagaggattagagacctggtccctgaatcc
caggcctacatggacctcttggcctttgagaggaaactggatcaaaccattgcccgaaag
cgtatggagattcaggaagcaatcaagaagcccattatgcaaaaacgcaaactcaggatc
tacatttccaacacatacacaccctgcaagcctgagggcgaggaggccgagaaggtgtcc
tcctgggagctccgagtggagggcaagcttctggaggagcctggcaagcagaagaggaag
ttctcatctttcttcaagagcctggtgattgagcttgataaagagctctatggaccggac
aaccacttagtagagtggcatagaatggccaccactcaggagacggatggtttccaggtt
aaaagacccggcgatgtgaatgttaaatgcaccctgctgctcatgctcgatcatcagccc
cctcagtacaaactggatccacggctggctcgcctgctgggtgtgcacacgcagacacgg
gccagcatcatgcaagctctctggctctatatcaagaacaacaagctgcaggatggtcac
gagaaggagtacattaactgcaaccgctatttcagacaaatcttcggctgccctcgcatg
aggttctctgagattcccatgaaactggcgggcctgctgcagcatcctgaccccatcatc
atcaatcatgtcattagtgtggaccccacagatcagaagaagaccgcttgctatgacatt
gatgtggaggtggacgacccactgaagggccaaatgaacagtttcttgtcctctacaacc
aaccagcaggaaattgctgctctggagatgaagatccatgagacgattgagtacatcaac
cagctgaagaccgagagagactttatgctgagcttcagcaataatccacaagacttcatc
caggactggcttaagtctcagagcagagatctgaagttgatgacagatgtgacaggaaac
ccagaggaggagaggaagaccgagttctaccaggctccctgggtaccggaggcagtgggc
agatacgtttactccaaggttcaacagaggagacaagagttggagcaggtgctgggtatc
cgactcacctaa
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