Scophthalmus maximus (turbot): 118287038
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Entry
118287038 CDS
T09850
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03266
Virion - Herpesvirus
smau04081
Hormone signaling
smau04145
Phagosome
smau04148
Efferocytosis
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118287038
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
118287038
04512 ECM-receptor interaction
118287038
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118287038
04148 Efferocytosis
118287038
09144 Cellular community - eukaryotes
04510 Focal adhesion
118287038
09142 Cell motility
04820 Cytoskeleton in muscle cells
118287038
04810 Regulation of actin cytoskeleton
118287038
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118287038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118287038
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118287038
04515 Cell adhesion molecules [BR:
smau04515
]
118287038
04090 CD molecules [BR:
smau04090
]
118287038
Membrane trafficking [BR:
smau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118287038
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118287038
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin beta subunits
118287038
CD molecules [BR:
smau04090
]
Proteins
118287038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
BNR_6
Motif
Other DBs
NCBI-GeneID:
118287038
NCBI-ProteinID:
XP_035467650
LinkDB
All DBs
Position
16:13481830..13496202
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPAQGLLWMCVLTSAGIAEVCASNVCTSRGASTCKQCLAVHPSCAWCLQEDFGQGVA
SSSRCDLKSNLVAAGCALSAVESPTSKMQVIEDRPLSNKAAGATQDVTQIKPQRLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPISPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRAGASHLLIFTSDAKTHVALDGRLAGIVRPNDGQC
HLNSDNIYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVRLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIQGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVTFECDCKCQAKAQPNSPKCNHGNG
TFECGICLCHPGRLGPHCECAEGDYSPTEQDRCSGPTGSGGPHSAVCSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SHLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGRLFDD
NTCSRICKDEIVLVDEIVLHDTNAVNCTYKDEDDCVERFQYYEDASGKSILFVIKEPDCP
KGPDILVLLLSVAGAILFLGLAALLIWKLLVTIHDRREFARFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggagctctcccggcgcaggggctgttgtggatgtgtgttttgacctctgctgggata
gcagaagtttgcgcctcaaacgtctgcacgtccagaggagccagcacgtgcaagcagtgc
ctggctgtgcaccccagctgtgcgtggtgcctccaggaggactttggccagggagttgcc
agctcttcccgctgtgacctgaagagcaacctggtggcagcgggctgtgctctgtcagcg
gtggagtctccaaccagcaaaatgcaagtgatcgaggaccggcccctcagcaacaaggca
gcgggggccacacaagatgtcactcagattaagccgcagagactccacatcaccctcagg
ccagatgatgccaagcgcttcacagtgaaggtgcgccaggtagaggattaccctgtggat
ctctactacctcatggacctctcctactccatgaatgatgacctcttccgcctgaggacg
ctgggcaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttc
ggggcttttgtggacaagccgatctcgccttacatgtacatctcccccaaagaggctgtg
aagaacccctgctacagcattaacaccacctgtctgccccagtttggctacaagcacgtt
ctgtctctgacggaagaagtgggccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagacgccccggagggaggcttcgacgccatcatccaggctgctgtgtgcaag
gagcagatcggctggcgtgcgggcgcttcccatctcctgatcttcacctcggatgcgaag
actcacgtggctctggatggtcgtctggcaggaatcgtacgacccaatgacgggcagtgc
cacctgaactctgacaatatttacagcatgtcaaccaccatggattacccatctctcgct
ctaatcacagagaagatgtcggagaacaatatcaacctcatctttgctgtcaccaatcct
gtggttcgtctgtaccagaattacagcgagctgattcctggcaccacagtgggaacactg
tccaacgactcaggcaacgtgattcagctcatactgaaggcctacgctaaaatccgttcc
aaggtggagctggagctacaaggcgtcccagaggagctgtccctgtccttcaacgccacc
tgtctgaatggggagctaatccagggcctcaagtcctgctcggggctcaaaataggagat
acggtgtctttcagtgtggaggcccgagctcgcggttgccccaaacagaagaagaaaacc
ttcatcatcaaacctgtgggcttcaaggactcgctctccatcactgtcaccttcgagtgc
gactgcaagtgccaggccaaagcccagcccaacagccccaaatgtaaccacggcaacggc
acctttgagtgtggcatctgcctgtgccacccgggtcgcctggggccacactgtgagtgt
gcggagggcgactatagtcccacagagcaagaccgctgcagtgggcccacaggctctgga
gggccccactctgccgtttgcagcggccgtggagactgtgtgtgcggccagtgcgtgtgc
cacagcagtgactttgggaaagtctggggaaagctgtgcgagtgtgacgacttcaactgt
ctgcgctacaagggggaactctgttccggccatggtgtctgtaactgtggtttctgccag
tgtgcaccggactggcagggcgagaactgtaactgctccagacgtactgacacctgcatg
tcccacctgggtctgctgtgcagtgggaggggccagtgtgtgtgtggggcctgtgagtgc
acccagcccggtgcgtacggggccacgtgtgacaagtgccccacctgccctgacgcctgt
accatgaagaaggagtgtgtggagtgtaagcacttcaagaggggcaggctgtttgacgac
aacacctgctctcgaatctgcaaggatgagattgtgcttgtggatgaaatagtgctccat
gatacgaatgctgtgaactgtacttacaaagatgaggatgactgcgtggagcgtttccag
tactatgaagacgccagtggcaagtccattttgttcgtcatcaaagagccagactgcccc
aagggtccagacattttggtgttgcttctgtcggtggcaggggccatcttgttccttggc
ctggcggctctgcttatctggaaactgctggtcaccatccatgacagacgggagttcgcc
agatttgaggaagaacgcgctcgcgccaagtgggacacgggacacaatccgctctacaaa
ggagccacatctaccttcacaaacatcacatacaggggaaaagactga
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