KEGG   Scophthalmus maximus (turbot): 118287038
Entry
118287038         CDS       T09850                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03266  Virion - Herpesvirus
smau04081  Hormone signaling
smau04145  Phagosome
smau04148  Efferocytosis
smau04510  Focal adhesion
smau04512  ECM-receptor interaction
smau04810  Regulation of actin cytoskeleton
smau04820  Cytoskeleton in muscle cells
smau05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    118287038
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    118287038
   04512 ECM-receptor interaction
    118287038
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118287038
   04148 Efferocytosis
    118287038
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118287038
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118287038
   04810 Regulation of actin cytoskeleton
    118287038
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118287038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smau04131]
    118287038
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smau04147]
    118287038
   04515 Cell adhesion molecules [BR:smau04515]
    118287038
   04090 CD molecules [BR:smau04090]
    118287038
Membrane trafficking [BR:smau04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    118287038
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118287038
Cell adhesion molecules [BR:smau04515]
 Integrins
  Integrin beta subunits
   118287038
CD molecules [BR:smau04090]
 Proteins
  118287038
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail I-EGF_1 PSI_integrin EGF_integrin EGF_2 EGF_TEN EGF_Teneurin BNR_6
Other DBs
NCBI-GeneID: 118287038
NCBI-ProteinID: XP_035467650
LinkDB
Position
16:13481830..13496202
AA seq 795 aa
MGALPAQGLLWMCVLTSAGIAEVCASNVCTSRGASTCKQCLAVHPSCAWCLQEDFGQGVA
SSSRCDLKSNLVAAGCALSAVESPTSKMQVIEDRPLSNKAAGATQDVTQIKPQRLHITLR
PDDAKRFTVKVRQVEDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPISPYMYISPKEAVKNPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRAGASHLLIFTSDAKTHVALDGRLAGIVRPNDGQC
HLNSDNIYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVRLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGELIQGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVTFECDCKCQAKAQPNSPKCNHGNG
TFECGICLCHPGRLGPHCECAEGDYSPTEQDRCSGPTGSGGPHSAVCSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCM
SHLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGRLFDD
NTCSRICKDEIVLVDEIVLHDTNAVNCTYKDEDDCVERFQYYEDASGKSILFVIKEPDCP
KGPDILVLLLSVAGAILFLGLAALLIWKLLVTIHDRREFARFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgggagctctcccggcgcaggggctgttgtggatgtgtgttttgacctctgctgggata
gcagaagtttgcgcctcaaacgtctgcacgtccagaggagccagcacgtgcaagcagtgc
ctggctgtgcaccccagctgtgcgtggtgcctccaggaggactttggccagggagttgcc
agctcttcccgctgtgacctgaagagcaacctggtggcagcgggctgtgctctgtcagcg
gtggagtctccaaccagcaaaatgcaagtgatcgaggaccggcccctcagcaacaaggca
gcgggggccacacaagatgtcactcagattaagccgcagagactccacatcaccctcagg
ccagatgatgccaagcgcttcacagtgaaggtgcgccaggtagaggattaccctgtggat
ctctactacctcatggacctctcctactccatgaatgatgacctcttccgcctgaggacg
ctgggcaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttc
ggggcttttgtggacaagccgatctcgccttacatgtacatctcccccaaagaggctgtg
aagaacccctgctacagcattaacaccacctgtctgccccagtttggctacaagcacgtt
ctgtctctgacggaagaagtgggccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagacgccccggagggaggcttcgacgccatcatccaggctgctgtgtgcaag
gagcagatcggctggcgtgcgggcgcttcccatctcctgatcttcacctcggatgcgaag
actcacgtggctctggatggtcgtctggcaggaatcgtacgacccaatgacgggcagtgc
cacctgaactctgacaatatttacagcatgtcaaccaccatggattacccatctctcgct
ctaatcacagagaagatgtcggagaacaatatcaacctcatctttgctgtcaccaatcct
gtggttcgtctgtaccagaattacagcgagctgattcctggcaccacagtgggaacactg
tccaacgactcaggcaacgtgattcagctcatactgaaggcctacgctaaaatccgttcc
aaggtggagctggagctacaaggcgtcccagaggagctgtccctgtccttcaacgccacc
tgtctgaatggggagctaatccagggcctcaagtcctgctcggggctcaaaataggagat
acggtgtctttcagtgtggaggcccgagctcgcggttgccccaaacagaagaagaaaacc
ttcatcatcaaacctgtgggcttcaaggactcgctctccatcactgtcaccttcgagtgc
gactgcaagtgccaggccaaagcccagcccaacagccccaaatgtaaccacggcaacggc
acctttgagtgtggcatctgcctgtgccacccgggtcgcctggggccacactgtgagtgt
gcggagggcgactatagtcccacagagcaagaccgctgcagtgggcccacaggctctgga
gggccccactctgccgtttgcagcggccgtggagactgtgtgtgcggccagtgcgtgtgc
cacagcagtgactttgggaaagtctggggaaagctgtgcgagtgtgacgacttcaactgt
ctgcgctacaagggggaactctgttccggccatggtgtctgtaactgtggtttctgccag
tgtgcaccggactggcagggcgagaactgtaactgctccagacgtactgacacctgcatg
tcccacctgggtctgctgtgcagtgggaggggccagtgtgtgtgtggggcctgtgagtgc
acccagcccggtgcgtacggggccacgtgtgacaagtgccccacctgccctgacgcctgt
accatgaagaaggagtgtgtggagtgtaagcacttcaagaggggcaggctgtttgacgac
aacacctgctctcgaatctgcaaggatgagattgtgcttgtggatgaaatagtgctccat
gatacgaatgctgtgaactgtacttacaaagatgaggatgactgcgtggagcgtttccag
tactatgaagacgccagtggcaagtccattttgttcgtcatcaaagagccagactgcccc
aagggtccagacattttggtgttgcttctgtcggtggcaggggccatcttgttccttggc
ctggcggctctgcttatctggaaactgctggtcaccatccatgacagacgggagttcgcc
agatttgaggaagaacgcgctcgcgccaagtgggacacgggacacaatccgctctacaaa
ggagccacatctaccttcacaaacatcacatacaggggaaaagactga

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