Scophthalmus maximus (turbot): 118287140
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Entry
118287140 CDS
T09850
Symbol
wnt5b
Name
(RefSeq) protein Wnt-5b
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04150
mTOR signaling pathway
smau04310
Wnt signaling pathway
smau04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118287140 (wnt5b)
04150 mTOR signaling pathway
118287140 (wnt5b)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
118287140 (wnt5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smau00536
]
118287140 (wnt5b)
Glycosaminoglycan binding proteins [BR:
smau00536
]
Heparan sulfate / Heparin
Morphogens
118287140 (wnt5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
118287140
NCBI-ProteinID:
XP_035467883
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Position
12:complement(17714561..17780971)
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AA seq
446 aa
AA seq
DB search
MVGRRRGGGGGGGRGFLGTTGSEHRGPGWVLTTADFRTETLFSLCASPHFSLSAPAINPQ
SASPSTGCEAATQRTMDNRPVRRRRTGALRHLLLAAAFLACSSQLLVVEANSWWSLALTP
IQRPEMYIIGAQPLCSQLSGLSQGQRKLCQLYQDHMIYIGDGAKTGIKECQYQFRQRRWN
CSTVDNTSVFGRVMQIGSRETAFTYAISAAGVVNAISRACREGELSTCGCSRSARPRDLP
RDWLWGGCGDNVHYGYRFAREFVDAREREKNYPRGSPEHARTLMNVQNNEAGRQAVYNLA
NVACKCHGVSGSCSLKTCWLQLADFRRVGEFLKEKYDSAAAMRIGRKGKLEQVDKRFNTP
TPEDLAYIDPSPDYCLRNETTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTYKHER
CHCKFHWCCYVKCKRCTTLVDQFVCK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaaggagaagaggaggaggaggaggaggaggacgaggttttcttgggacaacg
ggatccgagcaccgcggaccaggttgggtgctgactacagcagactttaggacagagaca
cttttttccctctgcgcctcccctcacttttccctgtctgcaccagccataaacccacag
agcgcgtccccaagcaccggctgtgaggcggcgacgcagcggaccatggacaacaggcct
gtccggagaaggcgaaccggtgcgctccgacatctgctgctggcagccgccttcctcgcc
tgcagctcccaactgctggtggtggaggccaactcgtggtggtcactagctctgaccccg
atccagcggccggagatgtatatcattggagctcagcctctctgcagtcagctgtctgga
ctctctcagggccagaggaagctctgccagctgtaccaggaccacatgatctacatcgga
gacggagccaagacgggcatcaaggagtgccagtatcagttcagacagaggaggtggaac
tgcagcaccgtggacaacacgtccgtgtttggaagggtcatgcagatcggctccagggaa
acagccttcacctacgccatcagcgcggccggcgtggtcaacgccatcagccgggcgtgc
cgcgagggcgagctctccacctgcggctgcagccgctcggcacgaccccgcgacctgccg
cgcgactggctgtggggcggctgcggcgacaatgtccactacggctaccggttcgcccgc
gagtttgtggacgccagagagagggagaagaattacccccgtgggtcacctgagcacgcc
cgaaccctgatgaacgtgcagaacaatgaagcagggagacaggccgtctataaccttgct
aacgtggcctgcaagtgtcacggggtctcgggctcgtgcagtctgaagacatgttggctc
cagctggccgacttcagacgcgtcggcgagtttctcaaggagaagtacgacagtgccgct
gccatgcgcatcggacgcaagggaaagctggagcaggtcgacaagcgcttcaacacccca
accccggaggacttggcctacatcgaccccagcccggattactgcctccgcaacgagacc
acgggctccctgggcacgcagggccgcctctgcaacaaaacctcggagggcatggacggc
tgcgagctgatgtgctgcggcagaggttacgatcagttcaagacctacaagcacgagcgc
tgccactgcaagttccactggtgctgctacgtcaagtgcaaacgctgcacgacgctcgtg
gaccagtttgtgtgtaaatag
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